NO03G04590.1, NO03G04590.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO03G04590.1
Unique Name	NO03G04590.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4453
Alignment location	chr3:1319578..1324908 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr3	genome	chr3:1319578..1324908 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO03G04590.1 vs.
Match: EWM29917.1 (pyruvate kinase [Nannochloropsis gaditana])

HSP 1 Score: 1006.9 bits (2602), Expect = 2.700e-290
Identity = 510/588 (86.73%), Postives = 544/588 (92.52%), Query Frame = 0

Query:   40 MASLSSMFPRGLGQGASKHSLRAASTPLLASLAARRSHSLFQTRGIYADATGKTYERQGLVMTRIVCTIGPASEPQDVMQALADEGMKIGRLNFSHAVKYEEMSEKLKTFRGIKGAHRRVGINFNLRGALLDTKGPEIRTGSFEGGVKHVEIPSGAEIILTTDPAWKDKGTAEKVYVDYGALGRTCKKGGNILLDDGIIKLEVIEPLHRTFHTANPAMPITETLCVVKNRNPVTLGARKGTNIPGAILELPALTERDKQDLQWGVENDVDFVAASFVRKAADVRSVIVHLERLMAKQKPTEANPRLVRPVVISKIENAEAITNFDEILAESDGIMVARGDLGVEVPFQDVFTAQKMMVKKCNDAGKPVIVATQMLDSMMRNPRPTRAEVSDVGNAVLDGADCVMLSGETAAGKYPVESVQAMRNCVVRADTTLDHPDEVTDPLSVLKRARSFTSPVRTSRPGLTSEELEAVALCTVVAASELQADLIIVLTTRGNFARAVAKHRPQIPVMVFCSELKVARQLQLFRGLFPVLPPNLQGATVEDIPEAIRTAKEIGWVKAGDKVVVSNYELWADAGIKQSMNLRVFPVQ 628
            MAS +SM  R  G GA   +  ++ TP L  L   R     QTRGIYADA GKTYERQGLVMTRIVCTIGPASE  + MQ+LADEGMKIGRLNFSHAVKY+EMSEKL+TFR +KGAHRRVGI+FNLRGA+LDTKGPEIRTGSF GGVKHVEIPSGA++ILTTDPAW DKGT EK++VDY ALGRTC KGGNILLDDGIIKLEV+EPLHR++ T +P  P+TETLCVVKNRNPV+LGARKGTNIPGAILELPALT RDK DL+WGV+NDVDFVAASFVRKAADVRSV+VHLERLMAK+KPTEANPRL+RP+VISK+ENAEAI NFDEILAESDGIMVARGDLGVEVPFQDVFTAQKMMVKKCNDAGKPVIVATQMLDSMMRNPRPTRAEVSDVGNAVLDGADCVMLSGETAAGKYPVESVQAMRNCVVRADTT+DHPD + DPLSVL+RAR+FTS VRT+RPGLTSEELE VALCTVVAASELQADLIIVLTTRGNFARAVAKHRPQIPVMVFCSELKVARQLQLFRGLFPVLPPNLQGATVEDIPEAIRTAKEIGWVKAGDKVVVSNYELWADAGIKQSMN+RVFPVQ
Sbjct:    3 MASSASMLLRSAGMGAFAKA--SSLTPFL--LKGNRLLYRLQTRGIYADAMGKTYERQGLVMTRIVCTIGPASESLETMQSLADEGMKIGRLNFSHAVKYDEMSEKLRTFRSLKGAHRRVGIDFNLRGAMLDTKGPEIRTGSFVGGVKHVEIPSGAQVILTTDPAWADKGTPEKIFVDYRALGRTCVKGGNILLDDGIIKLEVVEPLHRSYTTEDPERPVTETLCVVKNRNPVSLGARKGTNIPGAILELPALTGRDKADLEWGVDNDVDFVAASFVRKAADVRSVVVHLERLMAKRKPTEANPRLLRPLVISKVENAEAIKNFDEILAESDGIMVARGDLGVEVPFQDVFTAQKMMVKKCNDAGKPVIVATQMLDSMMRNPRPTRAEVSDVGNAVLDGADCVMLSGETAAGKYPVESVQAMRNCVVRADTTVDHPDTIVDPLSVLQRARTFTSRVRTTRPGLTSEELETVALCTVVAASELQADLIIVLTTRGNFARAVAKHRPQIPVMVFCSELKVARQLQLFRGLFPVLPPNLQGATVEDIPEAIRTAKEIGWVKAGDKVVVSNYELWADAGIKQSMNMRVFPVQ 586

The following BLAST results are available for this feature:

BLAST of NO03G04590.1 vs.

BLAST of NO03G04590.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM29917.1	2.700e-290	86.73	pyruvate kinase [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO03G04590	NO03G04590	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO03G04590.1	NO03G04590.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO03G04590.1.cds1	NO03G04590.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G04590.1.cds2	NO03G04590.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G04590.1.cds3	NO03G04590.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G04590.1.cds4	NO03G04590.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO03G04590.1.cds5	NO03G04590.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr3:1319578..1324908+
coding sequence from alignment at chr3:1319578..1324908+

mRNA sequence

>NO03G04590.1 ID=NO03G04590.1|Name=NO03G04590.1|organism=Nannochloropsis oceanica|type=mRNA|length=4453bp
TATGATTATGTTAATAAGACGCAACATAAAATACCTTAATTTTCATGGGT
ATTTACATCTTCATCCATTCTAACGTATGCTTTTTTGACTCTCATCTCCA
CCATTCCCAGCAGGAGCACATGTTTGCTTACTCCCTTACCTCCTCCTCTC
CCTTCAGAAGTACACCCACGTAAACAGGATGCACCGGCTTATCACTCGTC
CCCACCTGTCCTTTACTCACCTCCACCTCCTCCGTCACCCTCCACAACCT
CATCCCCTTCCCTTCCCCCTTCCCTTCCTCCCCAAATACCTCCCGCAGCA
CCAACAAAATCTCAAGCGCCGCGAATCTGGCCCCCAGACAAGGATGCCTC
CCTCCCCCCCACTGCAGGGCGAAAATCCCCGCCTTCTTCTTCTCGTCCCG
GACCAAAAACCGGTCGATGTCAAAATCCAACGGGCTATGATAGAAGGAGG
AGAGGGTGTTTATGTGTCGGGCTGAGAAAGCAAGAAAGTCACCGGCTGGG
ACGTGGTGTCCTGTGGACAGAAGGAGGCCATGAGGATTGACCACCTTGCG
AAAGAAAAGCCCGGGGGAATGAAGGCGAATGACTTCATCGATGACGGCTT
TCCCGACGCGCATATTCTCAATGTTGGAGAGATGGTGGTCGTCTGCTTTG
CACTTGCTCGTCTTCTTATTGCTGTCACTTCTCACTTGGCGCATTTTCTG
CTGCTCCAATTTCTCCACACTGTCGTCGCGATATCTGCTGCTGCTGCTGC
TGCTGCTGCAACTGCCACTGCTGCTGGTGGTGCATTCTGCGACGAACCGC
GATCGCACCTCCTCATTCCCCGCCAATTCCCATATACACCACGCCAAAAC
CGCAAAGCTATTTGTAAAGGCCGCAAACACAAAGGCAAACATGTCCGCCA
CCAACTCCTCCAAGTCCAACCCGCCCACCTCCTGCCGCACCAATAGATCA
AGAACACTTTCCGCACGCTCTTCCTTCTCTCCTACCTCTCCCTCCCTCCC
TCGTTCCTCCTTTGCTTTTCGGTACAAGACCAGCGCCTCCTCTGTTAAGC
CTCTTATTTTTACCCATGCCTGTTCCTTTTTTCTGGGGCCGAGCAAAAGA
GAAGACATCATGTCAACCAGGCCTTTTTCCGGGTCGATCACGTCAAAACA
CTCATAAAATTGCCCATAACGACCATCTTTTAAAATGTGTGGCCCGAATA
GAACGCGAAGATTGAGGCGCATGACTAGGTGACGGCATGTGTCAAAAAGG
TCAATCAGGCCCGGGGGGGCTGAAGGGGATGACGGGGATGAGGAATAAGA
CGACGACGAGGAGGAGGAGGGGGCGTGGAAGAGTAATGGTATCTGCGTCT
TAGCTTCGGCGGCAAGGAGATTGCAGAACCACTGCATGTTGGCGTCTCGA
AAAAGGGGGAGAAAGAAATGATGCCGTGGTATGAAGGTGAACCCTTTTGG
TAGCATGTCTTGCATCAAGTCCGCAAAGCCTTCCAAGAAGGACAGATCGC
TTTCCTTACTATTTAGCACTAGCTTTACGTCGGGCAGCGCGTACACGAGA
GACCACCATTTACCCGCAACATAGATTCTAAAGGGGCTATCATTCAGGTG
TTTCGTATGCATTTTGATGAGAAAGTCGTTGACATTCTTAAGGAATGCCA
GTCCCACCCCCAGGAAGGGCACCCAGCCTCGGTACGAGGGGGGAAGAGGC
TGCGTGGTCTGTGCATGGCGCCGCATATGCACAAGCAAAAGTGTTGTGAC
CAGCGCAACACCCACGGTTATGAAGACCGGAGATCCCATGTCCACAGCGG
ACATCCAGAGCATGGCTAGCTATGGCCCTGGTCGGTGTTGTTGTTGTTGA
GTTGATTGCGTGATTATGATTTTCCTGACCTTTTGTCATATCGATATTGA
CAATGGCAATCTCTCGAGATACATTGAGTTATCTGATGGGTCGTTTGTAT
TCATGGACATATCTGGTGGGGGAGACTGTATGATTGCCCAGGCCGACCGA
AATTAACCTCCCCATGTCGCTGATCGAGGTCCACTTCTTGGGTCGTACGT
ACTTGCTTTGTCCCTGCTGACCTGCCCCTGTACGCCTTGCTGGGATGGCC
CTCTTGTTAGTCGTAGCTCCACGTAATAGTACCCCTATTATGTATCCGTG
GGTTCGGTGAGAGCGTGGTTTTGTGCTGCCTATGAAATATGTTTCTCCCG
TCTTCGCCGCAATAATCGCCGAGCCATGTGCTGGCACTGTCCTCCTCCAC
ACGTCGTTAACCCATACCACCACATGGCTCAGCACACAGTAGAGGCAAAT
TCTACCCTCACGCACAACTTCCCACACATAAAGACCTCGACCATGGCGTC
GTTGTCCTCCATGTTCCCACGCGGCCTCGGCCAAGGAGCCAGCAAACATT
CGCTCAGGGCCGCTAGCACGCCGTTGCTGGCTTCCTTGGCGGCGCGTCGC
AGTCATTCCCTGTTCCAAACCCGTGGCATCTATGCAGATGCAACGGGCAA
GACGTATGAGCGGCAAGGTCTGGTCATGACGCGCATTGTCTGCACGATCG
GCCCGGCTTCGGAGCCCCAAGATGTGATGCAGGCATTAGCGGACGAAGGC
ATGAAGATCGGGCGATTAAATTTCTCGCATGCGGTCAAGTATGAGGAGAT
GTCCGAGAAGCTGAAGACCTTCCGCGGTATCAAGGGAGCACATCGTCGTG
TTGGTATCAATTTCAACCTCCGTGGCGCCCTCCTAGACACTAAAGGTCCT
GAAATCCGCACCGGCTCATTTGAGGGTGGGGTGAAGCACGTTGAGATTCC
CTCAGGGGCTGAAATAATCTTGACCACGGACCCCGCCTGGAAGGACAAAG
GGACAGCGGAGAAGGTTTACGTGGATTACGGTGCTCTGGGGCGGACGTGT
AAGAAGGGGGGTAATATACTGTTGGATGATGGCATTATCAAGCTGGAAGT
GATTGAGCCCTTGCATCGGACTTTTCACACGGCGAACCCGGCCATGCCGA
TTACGGAGACGTTGTGCGTGGTGAAAAATAGAAACCCCGTCACGTTGGGC
GCGAGGAAGGGGACGAATATTCCGGGGGCGATTCTGGAACTGCCGGCATT
GACAGAAAGGGATAAGCAGGACTTGCAGTGGGGGGTTGAGAATGATGTTG
ATTTCGTGGCGGCATCGTTTGTGCGGAAAGCGGCCGACGTCCGCTCTGTG
ATTGTGCACTTGGAGCGATTGATGGCCAAACAGAAGCCGACGGAGGCGAA
TCCGAGGTTGGTGAGACCAGTGGTAATTTCCAAAATTGAGAATGCGGAGG
CAATTACTAATTTCGATGAGATTTTGGCCGAGTCGGATGGGATCATGGTG
GCGAGAGGAGACTTGGGGGTTGAAGTCCCCTTCCAGGACGTCTTTACGGC
GCAGAAAATGATGGTGAAAAAATGCAACGATGCTGGTAAGCCCGTCATCG
TCGCCACTCAAATGCTTGACTCCATGATGCGTAACCCCCGGCCGACCCGA
GCAGAAGTGTCCGACGTGGGGAATGCTGTCCTCGATGGCGCTGATTGTGT
CATGTTGTCAGGCGAGACAGCCGCCGGGAAGTACCCCGTGGAATCCGTAC
AGGCGATGCGGAACTGTGTTGTCCGCGCGGATACCACCCTGGATCATCCC
GACGAAGTCACGGACCCCCTGTCTGTCTTGAAGAGGGCGCGGAGTTTTAC
GTCCCCTGTGCGGACGAGCCGACCGGGCTTGACTTCGGAGGAGCTTGAGG
CTGTGGCACTATGCACGGTAGTGGCTGCATCGGAGCTTCAAGCTGACTTG
ATCATCGTTCTGACAACTCGCGGGAATTTTGCCCGGGCGGTGGCAAAGCA
TCGGCCGCAGATCCCTGTGATGGTGTTCTGTAGTGAGTTGAAGGTGGCAA
GGCAGCTCCAGCTTTTCAGGGGGCTCTTCCCTGTACTGCCCCCCAATCTG
CAGGGGGCCACGGTGGAGGATATCCCGGAGGCCATTCGAACGGCAAAAGA
AATTGGTTGGGTGAAGGCGGGAGACAAGGTGGTGGTCTCGAATTATGAGC
TGTGGGCGGATGCAGGAATTAAGCAGAGCATGAATTTGAGGGTGTTTCCC
GTGCAATAAGTGAGAGGAAGAGGGAGTTAACAAGGAAGGGGAAGGGGTTG
CAAAGGAGGCGTGTTTGTGTGTTTGTGTGTATGTGCGTGTGTGTGTGCTG
TGTGTTTTTGTATTTTACTCTAGGTGTGCTGTCTTTGATGTTTGCACAGT
GCTGTATGGGTGGTCGAAAACATGTCCCTGACGGCGAACAACGTCTCGTT
TATGGGTGGCGGCGTGAGCTGACAATGATGCATGTAAACATTCTTTCATA
CAAGCTTGCTGACTTGGTCAGATGAGCCAGGAAACTGGCATAGAAAACTA
AAAACGAACGGACGAGCGAACAAAAAAGAAGTAAGTAAGAGAAACCGAAT
GCA

protein sequence of NO03G04590.1

>NO03G04590.1-protein ID=NO03G04590.1-protein|Name=NO03G04590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=628bp
MCWHCPPPHVVNPYHHMAQHTVEANSTLTHNFPHIKTSTMASLSSMFPRG
LGQGASKHSLRAASTPLLASLAARRSHSLFQTRGIYADATGKTYERQGLV
MTRIVCTIGPASEPQDVMQALADEGMKIGRLNFSHAVKYEEMSEKLKTFR
GIKGAHRRVGINFNLRGALLDTKGPEIRTGSFEGGVKHVEIPSGAEIILT
TDPAWKDKGTAEKVYVDYGALGRTCKKGGNILLDDGIIKLEVIEPLHRTF
HTANPAMPITETLCVVKNRNPVTLGARKGTNIPGAILELPALTERDKQDL
QWGVENDVDFVAASFVRKAADVRSVIVHLERLMAKQKPTEANPRLVRPVV
ISKIENAEAITNFDEILAESDGIMVARGDLGVEVPFQDVFTAQKMMVKKC
NDAGKPVIVATQMLDSMMRNPRPTRAEVSDVGNAVLDGADCVMLSGETAA
GKYPVESVQAMRNCVVRADTTLDHPDEVTDPLSVLKRARSFTSPVRTSRP
GLTSEELEAVALCTVVAASELQADLIIVLTTRGNFARAVAKHRPQIPVMV
FCSELKVARQLQLFRGLFPVLPPNLQGATVEDIPEAIRTAKEIGWVKAGD
KVVVSNYELWADAGIKQSMNLRVFPVQ*

mRNA from alignment at chr3:1319578..1324908+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO03G04590.1 ID=NO03G04590.1|Name=NO03G04590.1|organism=Nannochloropsis oceanica|type=mRNA|length=5331bp|location=Sequence derived from alignment at chr3:1319578..1324908+ (Nannochloropsis oceanica)
TATGATTATGTTAATAAGACGCAACATAAAATACCTTAATTTTCATGGGT
ATTTACATCTTCATCCATTCTAACGTATGCTTTTTTGACTCTCATCTCCA
CCATTCCCAGCAGGAGCACATGTTTGCTTACTCCCTTACCTCCTCCTCTC
CCTTCAGAAGTACACCCACGTAAACAGGATGCACCGGCTTATCACTCGTC
CCCACCTGTCCTTTACTCACCTCCACCTCCTCCGTCACCCTCCACAACCT
CATCCCCTTCCCTTCCCCCTTCCCTTCCTCCCCAAATACCTCCCGCAGCA
CCAACAAAATCTCAAGCGCCGCGAATCTGGCCCCCAGACAAGGATGCCTC
CCTCCCCCCCACTGCAGGGCGAAAATCCCCGCCTTCTTCTTCTCGTCCCG
GACCAAAAACCGGTCGATGTCAAAATCCAACGGGCTATGATAGAAGGAGG
AGAGGGTGTTTATGTGTCGGGCTGAGAAAGCAAGAAAGTCACCGGCTGGG
ACGTGGTGTCCTGTGGACAGAAGGAGGCCATGAGGATTGACCACCTTGCG
AAAGAAAAGCCCGGGGGAATGAAGGCGAATGACTTCATCGATGACGGCTT
TCCCGACGCGCATATTCTCAATGTTGGAGAGATGGTGGTCGTCTGCTTTG
CACTTGCTCGTCTTCTTATTGCTGTCACTTCTCACTTGGCGCATTTTCTG
CTGCTCCAATTTCTCCACACTGTCGTCGCGATATCTGCTGCTGCTGCTGC
TGCTGCTGCAACTGCCACTGCTGCTGGTGGTGCATTCTGCGACGAACCGC
GATCGCACCTCCTCATTCCCCGCCAATTCCCATATACACCACGCCAAAAC
CGCAAAGCTATTTGTAAAGGCCGCAAACACAAAGGCAAACATGTCCGCCA
CCAACTCCTCCAAGTCCAACCCGCCCACCTCCTGCCGCACCAATAGATCA
AGAACACTTTCCGCACGCTCTTCCTTCTCTCCTACCTCTCCCTCCCTCCC
TCGTTCCTCCTTTGCTTTTCGGTACAAGACCAGCGCCTCCTCTGTTAAGC
CTCTTATTTTTACCCATGCCTGTTCCTTTTTTCTGGGGCCGAGCAAAAGA
GAAGACATCATGTCAACCAGGCCTTTTTCCGGGTCGATCACGTCAAAACA
CTCATAAAATTGCCCATAACGACCATCTTTTAAAATGTGTGGCCCGAATA
GAACGCGAAGATTGAGGCGCATGACTAGGTGACGGCATGTGTCAAAAAGG
TCAATCAGGCCCGGGGGGGCTGAAGGGGATGACGGGGATGAGGAATAAGA
CGACGACGAGGAGGAGGAGGGGGCGTGGAAGAGTAATGGTATCTGCGTCT
TAGCTTCGGCGGCAAGGAGATTGCAGAACCACTGCATGTTGGCGTCTCGA
AAAAGGGGGAGAAAGAAATGATGCCGTGGTATGAAGGTGAACCCTTTTGG
TAGCATGTCTTGCATCAAGTCCGCAAAGCCTTCCAAGAAGGACAGATCGC
TTTCCTTACTATTTAGCACTAGCTTTACGTCGGGCAGCGCGTACACGAGA
GACCACCATTTACCCGCAACATAGATTCTAAAGGGGCTATCATTCAGGTG
TTTCGTATGCATTTTGATGAGAAAGTCGTTGACATTCTTAAGGAATGCCA
GTCCCACCCCCAGGAAGGGCACCCAGCCTCGGTACGAGGGGGGAAGAGGC
TGCGTGGTCTGTGCATGGCGCCGCATATGCACAAGCAAAAGTGTTGTGAC
CAGCGCAACACCCACGGTTATGAAGACCGGAGATCCCATGTCCACAGCGG
ACATCCAGAGCATGGCTAGCTATGGCCCTGGTCGGTGTTGTTGTTGTTGA
GTTGATTGCGTGATTATGATTTTCCTGACCTTTTGTCATATCGATATTGA
CAATGGCAATCTCTCGAGATACATTGAGTTATCTGATGGGTCGTTTGTAT
TCATGGACATATCTGGTGGGGGAGACTGTATGATTGCCCAGGCCGACCGA
AATTAACCTCCCCATGTCGCTGATCGAGGTCCACTTCTTGGGTCGTACGT
ACTTGCTTTGTCCCTGCTGACCTGCCCCTGTACGCCTTGCTGGGATGGCC
CTCTTGTTAGTCGTAGCTCCACGTAATAGTACCCCTATTATGTATCCGTG
GGTTCGGTGAGAGCGTGGTTTTGTGCTGCCTATGAAATATGTTTCTCCCG
TCTTCGCCGCAATAATCGCCGAGCCATGTGCTGGCACTGTCCTCCTCCAC
ACGTCGTTAACCCATACCACCACATGGCTCAGCACACAGTAGAGGCAAAT
TCTACCCTCACGCACAACTTCCCACACATAAAGACCTCGACCATGGCGTC
GTTGTCCTCCATGTTCCCACGCGGCCTCGGCCAAGGAGCCAGCAAACATT
CGCTCAGGGCCGCTAGCACGCCGTTGCTGGCTTCCTTGGCGGCGCGTCGC
AGTCATTCCCTGTTCCAAACCCGTGGCATCTATGCAGATGCAACGGGCAA
GACGTATGAGCGGCAAGGTCTGGTCATGTACGTAGCATTCGATGATTGGG
AATTTAGAGGTTTAAGAGAGCGAGTTGGGTTGGGTTGTACTTCAATGATG
ACCGAACGTCACGATCCGCCGGGCTGCCGGCTTTGAGCCTTTACAAAAGT
CGCGTGTGTCAAGTTAAGGTCATAGGCGTTCAAGTATAGAGCTTACCGGT
ACTGTAAATGTGCCTTAATCATCCTTCTTTGATCAGAAAATCCCCTTTCC
CCCGACCATCCCCGCCTCTCCCTCACTCTCTCCCTTGACACACAGGACGC
GCATTGTCTGCACGATCGGCCCGGCTTCGGAGCCCCAAGATGTGATGCAG
GCATTAGCGGACGAAGGCATGAAGATCGGGCGATTAAATTTCTCGCATGC
GGTCAAGTATGAGGAGATGTCCGAGAAGCTGAAGACCTTCCGCGGTATCA
AGGCAAGTCACATTTTTGTTTCTTGTATTTGTATGGTGTACGTGATTGAA
GATTGATAAATTGCTGGATGGTTTCATCAGATTTTTTTGATAAAGATTTT
ATCGATAAACTAGGTTTTTAGGCAGCATCCCTAGCAGGCACAATCAATCA
TGTAGAATATACTCACCTATTCTCCTCCCTCCCCCTCGCTCCCTCCCCAT
CCAAATACAGGGAGCACATCGTCGTGTTGGTATCAATTTCAACCTCCGTG
GCGCCCTCCTAGACACTAAAGGTCCTGAAATCCGCACCGGCTCATTTGAG
GGTGGGGTGAAGCACGTTGAGATTCCCTCAGGGGCTGAAATAATCTTGAC
CACGGACCCCGCCTGGAAGGACAAAGGGACAGCGGAGAAGGTTTACGTGG
ATTACGGTGCTCTGGGGCGGACGTGTAAGAAGGGGGGTAATATACTGTTG
GATGATGGCATTATCAAGCTGGAAGTGATTGAGCCCTTGCATCGGACTTT
TCACACGGCGAACCCGGCCATGCCGATTACGGAGACGTTGTGCGTGGTGA
AAAATAGAAACCCCGTCACGTTGGGCGCGAGGAAGGGGACGAATATTCCG
GGGGCGATTCTGGAACTGCCGGCATTGACAGAAAGGGATAAGCAGGACTT
GCAGTGGGGGGTTGAGAATGATGTTGATTTCGTGGCGGCATCGTTTGTGC
GGAAAGCGGCCGACGTCCGCTCTGTGATTGTGCACTTGGAGCGATTGATG
GCCAAACAGAAGCCGACGGAGGCGAATCCGAGGTTGGTGAGACCAGTGGT
AATTTCCAAAATTGAGAATGCGGAGGCAATTACTAATTTCGATGAGATTT
TGGCCGAGTCGGATGGGATCATGGTGGCGAGAGGAGACTTGGGGGTGAGG
AGTTTTTGGGAGGAGGCATGGAGGGACATGGGACGGGAAAAGGTGTTTAT
TTGTGATGGAAAGTGGGCTGAGCGTGCTAAATACGCGCGTTTGCTGCGTC
AGTAAGTTTGTCTAATTCATTCTTCTCGTCCATGCTCCCCACCAGCACTG
AGAGTCCCTCTTTTCTTTTTTCCTTTTTTTCTTTTCCCCTCATTTTTTCC
CCAACTCGAATAGGTTGAAGTCCCCTTCCAGGACGTCTTTACGGCGCAGA
AAATGGTAAGCCAACGACGAATGGTAGAGTTATAAGGGAAAAGGGACGGG
ACAACTTTCCTGTGAGGTTTACATTACACATGTAATGTATGCATGGGTCA
CATCAAAGGATGCGTTGGTTAGCTTGACCTGTATTTCATCACCCCTCCTC
CCTTCCCTTCCTCGCTCGCTCTGTTTCCCCCATACCAGATGGTGAAAAAA
TGCAACGATGCTGGTAAGCCCGTCATCGTCGCCACTCAAATGCTTGACTC
CATGATGCGTAACCCCCGGCCGACCCGAGCAGAAGTGTCCGACGTGGGGA
ATGCTGTCCTCGATGGCGCTGATTGTGTCATGTTGTCAGGCGAGACAGCC
GCCGGGAAGTACCCCGTGGAATCCGTACAGGCGATGCGGAACTGTGTTGT
CCGCGCGGATACCACCCTGGATCATCCCGACGAAGTCACGGACCCCCTGT
CTGTCTTGAAGAGGGCGCGGAGTTTTACGTCCCCTGTGCGGACGAGCCGA
CCGGGCTTGACTTCGGAGGAGCTTGAGGCTGTGGCACTATGCACGGTAGT
GGCTGCATCGGAGCTTCAAGCTGACTTGATCATCGTTCTGACAACTCGCG
GGAATTTTGCCCGGGCGGTGGCAAAGCATCGGCCGCAGATCCCTGTGATG
GTGTTCTGTAGTGAGTTGAAGGTGGCAAGGCAGCTCCAGCTTTTCAGGGG
GCTCTTCCCTGTACTGCCCCCCAATCTGCAGGGGGCCACGGTGGAGGATA
TCCCGGAGGCCATTCGAACGGCAAAAGAAATTGGTTGGGTGAAGGCGGGA
GACAAGGTGGTGGTCTCGAATTATGAGCTGTGGGCGGATGCAGGAATTAA
GCAGAGCATGAATTTGAGGGTGTTTCCCGTGCAATAAGTGAGAGGAAGAG
GGAGTTAACAAGGAAGGGGAAGGGGTTGCAAAGGAGGCGTGTTTGTGTGT
TTGTGTGTATGTGCGTGTGTGTGTGCTGTGTGTTTTTGTATTTTACTCTA
GGTGTGCTGTCTTTGATGTTTGCACAGTGCTGTATGGGTGGTCGAAAACA
TGTCCCTGACGGCGAACAACGTCTCGTTTATGGGTGGCGGCGTGAGCTGA
CAATGATGCATGTAAACATTCTTTCATACAAGCTTGCTGACTTGGTCAGA
TGAGCCAGGAAACTGGCATAGAAAACTAAAAACGAACGGACGAGCGAACA
AAAAAGAAGTAAGTAAGAGAAACCGAATGCA

Coding sequence (CDS) from alignment at chr3:1319578..1324908+

>NO03G04590.1 ID=NO03G04590.1|Name=NO03G04590.1|organism=Nannochloropsis oceanica|type=CDS|length=1884bp|location=Sequence derived from alignment at chr3:1319578..1324908+ (Nannochloropsis oceanica)
ATGTGCTGGCACTGTCCTCCTCCACACGTCGTTAACCCATACCACCACAT
GGCTCAGCACACAGTAGAGGCAAATTCTACCCTCACGCACAACTTCCCAC
ACATAAAGACCTCGACCATGGCGTCGTTGTCCTCCATGTTCCCACGCGGC
CTCGGCCAAGGAGCCAGCAAACATTCGCTCAGGGCCGCTAGCACGCCGTT
GCTGGCTTCCTTGGCGGCGCGTCGCAGTCATTCCCTGTTCCAAACCCGTG
GCATCTATGCAGATGCAACGGGCAAGACGTATGAGCGGCAAGGTCTGGTC
ATGACGCGCATTGTCTGCACGATCGGCCCGGCTTCGGAGCCCCAAGATGT
GATGCAGGCATTAGCGGACGAAGGCATGAAGATCGGGCGATTAAATTTCT
CGCATGCGGTCAAGTATGAGGAGATGTCCGAGAAGCTGAAGACCTTCCGC
GGTATCAAGGGAGCACATCGTCGTGTTGGTATCAATTTCAACCTCCGTGG
CGCCCTCCTAGACACTAAAGGTCCTGAAATCCGCACCGGCTCATTTGAGG
GTGGGGTGAAGCACGTTGAGATTCCCTCAGGGGCTGAAATAATCTTGACC
ACGGACCCCGCCTGGAAGGACAAAGGGACAGCGGAGAAGGTTTACGTGGA
TTACGGTGCTCTGGGGCGGACGTGTAAGAAGGGGGGTAATATACTGTTGG
ATGATGGCATTATCAAGCTGGAAGTGATTGAGCCCTTGCATCGGACTTTT
CACACGGCGAACCCGGCCATGCCGATTACGGAGACGTTGTGCGTGGTGAA
AAATAGAAACCCCGTCACGTTGGGCGCGAGGAAGGGGACGAATATTCCGG
GGGCGATTCTGGAACTGCCGGCATTGACAGAAAGGGATAAGCAGGACTTG
CAGTGGGGGGTTGAGAATGATGTTGATTTCGTGGCGGCATCGTTTGTGCG
GAAAGCGGCCGACGTCCGCTCTGTGATTGTGCACTTGGAGCGATTGATGG
CCAAACAGAAGCCGACGGAGGCGAATCCGAGGTTGGTGAGACCAGTGGTA
ATTTCCAAAATTGAGAATGCGGAGGCAATTACTAATTTCGATGAGATTTT
GGCCGAGTCGGATGGGATCATGGTGGCGAGAGGAGACTTGGGGGTTGAAG
TCCCCTTCCAGGACGTCTTTACGGCGCAGAAAATGATGGTGAAAAAATGC
AACGATGCTGGTAAGCCCGTCATCGTCGCCACTCAAATGCTTGACTCCAT
GATGCGTAACCCCCGGCCGACCCGAGCAGAAGTGTCCGACGTGGGGAATG
CTGTCCTCGATGGCGCTGATTGTGTCATGTTGTCAGGCGAGACAGCCGCC
GGGAAGTACCCCGTGGAATCCGTACAGGCGATGCGGAACTGTGTTGTCCG
CGCGGATACCACCCTGGATCATCCCGACGAAGTCACGGACCCCCTGTCTG
TCTTGAAGAGGGCGCGGAGTTTTACGTCCCCTGTGCGGACGAGCCGACCG
GGCTTGACTTCGGAGGAGCTTGAGGCTGTGGCACTATGCACGGTAGTGGC
TGCATCGGAGCTTCAAGCTGACTTGATCATCGTTCTGACAACTCGCGGGA
ATTTTGCCCGGGCGGTGGCAAAGCATCGGCCGCAGATCCCTGTGATGGTG
TTCTGTAGTGAGTTGAAGGTGGCAAGGCAGCTCCAGCTTTTCAGGGGGCT
CTTCCCTGTACTGCCCCCCAATCTGCAGGGGGCCACGGTGGAGGATATCC
CGGAGGCCATTCGAACGGCAAAAGAAATTGGTTGGGTGAAGGCGGGAGAC
AAGGTGGTGGTCTCGAATTATGAGCTGTGGGCGGATGCAGGAATTAAGCA
GAGCATGAATTTGAGGGTGTTTCCCGTGCAATAA

Synonyms

Publications