NO03G02930.1, NO03G02930.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO03G02930.1
Unique NameNO03G02930.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3833
Alignment locationchr3:880584..885003 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:880584..885003 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO03G02930.1 vs.
Match: XP_008612915.1 (hypothetical protein SDRG_08796 [Saprolegnia diclina VS20]; EQC33692.1 hypothetical protein SDRG_08796 [Saprolegnia diclina VS20])

HSP 1 Score: 819.3 bits (2115), Expect = 1.400e-233
Identity = 521/1098 (47.45%), Postives = 664/1098 (60.47%), Query Frame = 0
Query:   13 SSMRGDFFELVKAIGECRSKQEEDRIILDEIAVLKSKIGMQATFS---------KKMKEYLVRLIYCEMLGHDASFGYIKAVELSASSNLLQKRVGYLTASLCLAPEHEFRFMLVNQFTRDMASINYLEVCAALNAVCRLATVDTIPALLPEVTNKLRHEQEAVRKKAVMALQKFHSLQPNSIAHLDDRIRRALCDKDPSVMAAVLCLLLDLIRASPAPYRDLVPSFVSILKQIADHRLPRDYDYHRVPAPWIQLHLLRILALLGASDQRSSEGMYEVLVDVMRRADTGINVGYAIVYECVRTVTSIYPNTVLLDAAAGSIARFIGSDNHNLKYLGVKGLAAIVKDHPRYAAQHQLAVIDCLEDPDETLKRKTLDLLHRMTNPVNVEFITAKLLEFLEKATDPFLRSDLVHRISNSAERYAPSTSWYIQTMTRIFLLAGDLVKPEAAHTLMQLIAEGTGEDDVADEQLRKDAVENYVSLLLDDTSIATGGGALLPDILVQTMSWTLGEYGYLSERLPQTEIMTRLAADIAHRPF-HDPCTRGFVVASVVKLVAQT-GTCPAAVSSLLKLYGQSWNLDLQQRCLEFSALLRMPEVMVNVLPMDASCEDLGVDESLHFLDSYVEAAVAQGAPRYCPPPKHADVLALAEGRELKEPGLKLTPYAKPEMPSPAPAIPGG------AGSGNLLAGLSLNSASLSSGGGGVGLQKPAAGPRQGPRQGLRPVAQVWSRQGAMVGSKVSAASSGTPPGVAPSPIAQTLVSSGPAQEAIEGQA-ASNVEKKRSTGSGSRQEASTPRE--MTEKEKMAQALFGGMGASSSTGVGRAPWGVNGSGGGGGAAETTASRSAGQSGKQQLSSTCADGGVDLLDMDGTAINGSTKGSRASAPAFPLSSSPHASTKVSTAATPSLLDFSDEKIVSKPKSAPASVPTPTFSAASTSSSSSSSLSSTPAQ---VDPF--ASLSSVIPHDPQPSLSSGARFSHNGRGLQPLAINTQEFGALWTQMCFQAPAQGTQTSIRDLDALAAALQQEVGLHVVESIPRTAEVIAAGRLGPDGGTTLLVHAKLHAQSGSADCLIKCNDSVLAQHLGKHLVKALR 1086
            S +  DFFELVK+IGE +SKQEEDRII+ E+A LK K+   +  S         KK KE+L+RL+Y EMLGHDASFGYIKAVE++A++NL+QKRVGYLT SL L+P HEFRFM++NQ  RD+ S N+LEVC+AL AVC+L TV+ IPA+ P +   LRHE E VRKKAVMAL +FH L P+S+A + D +RR LCD+DPSVM A LCLL D+   +PA Y+DLVPS+VSILKQI +HRLPR++DYHR+PAPWIQ+ LL+ILALLG +DQ +SEGMYEVL DVMRRADTGINVGYAI+YECVRTVT+IYPN+ LLDAAA SI+RFI SDNHNLKYLGV GLAAIVKDHPRYAA HQ+AVIDCLEDPDETLKRKTLDLL+RMTNPVNVEFI AKL  FL +ATD FLR++LV RI+  AERYAP+ +WYIQTMT +F L G+LVK E AH LM+LIAEG+G+D+  D +LR+DAV+ Y+ LL            +LPDILV TM+W LGEYGYLSE +   EI  RL  ++  RPF ++  TRG++V +V KL AQ  G    A  ++++ Y  S ++DLQQRCLE+ A+   P +M    P+DASCEDL VD +L FL ++V+ A+AQGAPRY PP  H D    A  R   E  L  T Y KP++P     +P         G G   A         ++  GG   +KP+             V  VW   G  + +  +   +  P G  P+       + G   ++  GQ+ A       ST      E   P E  + ++ +MA ALFGG+                    G G     A R++   G     ST          + G +   +    R++ P  P+   P        A  P  +D  D         APA+   P++ A  TS+      +S PA     DPF    L S +P       S+   F +NGR L+P  I T EFG  W     +   + + +SI  LD   A L+Q   ++ VESI +T EVIAAGRL        L+H K+  +SG  D  ++  D      L   L   L+
Sbjct:    4 SHLSKDFFELVKSIGESKSKQEEDRIIVQEVAQLKRKMSELSVASNSNQLQANKKKQKEFLIRLMYVEMLGHDASFGYIKAVEMTAATNLIQKRVGYLTCSLTLSPAHEFRFMIINQLQRDLQSPNHLEVCSALMAVCKLVTVEMIPAVQPMIMEALRHEIELVRKKAVMALHRFHQLNPDSVADMGDTLRRTLCDRDPSVMGAALCLLHDVAVVNPAAYKDLVPSYVSILKQITEHRLPREFDYHRIPAPWIQIRLLKILALLGQADQTTSEGMYEVLHDVMRRADTGINVGYAIIYECVRTVTTIYPNSTLLDAAAASISRFISSDNHNLKYLGVTGLAAIVKDHPRYAAAHQMAVIDCLEDPDETLKRKTLDLLYRMTNPVNVEFIVAKLTSFLREATDVFLRTELVSRITQCAERYAPNNAWYIQTMTDVFELGGELVKVEVAHNLMRLIAEGSGDDEEQDMELRRDAVDTYLELL---------ERPVLPDILVCTMAWVLGEYGYLSEAMDLDEIAERL-CELVDRPFENEDVTRGYIVTAVTKLTAQMHGREIDAARAMMEKYKTSRSIDLQQRCLEYLAMHAHPALMATTYPVDASCEDLEVDSTLSFLQAFVDQALAQGAPRYDPP--HDDE-EEAYSRH-NESRLNFTAYEKPDLPYAGHKLPPNDPAAMLGGYGGAAAPAPWGGTPNATDAGGFNARKPS-------------VKNVWGPSG--MNAPAAPEPTPAPYGGQPNNPYYNNNNQGHHHQSQYGQSPAPAYSPDHSTHYNESDEDQEPDEPVIDKRAEMANALFGGL-------------------PGAGVPLPAAKRTSTNRGTLSRKST----------VKGASAVSAPPKRRSTKPEQPVQPQP----SYQAAPAPVHMDLLDMSF-----DAPAA---PSY-APQTSAPMLDPFASAPAPAPVADPFQMGGLGSSLP-------SATPVFQYNGRPLEPWQITTPEFGGRWGSCPAEIKTKVSPSSIVTLDDFCARLRQ-FDINAVESIAQTNEVIAAGRL-LSSDVVCLIHCKV--RSGGLDLTVRTPDMAFTNALSGFLGHVLQ 1019          
The following BLAST results are available for this feature:
BLAST of NO03G02930.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
XP_008612915.11.400e-23347.45hypothetical protein SDRG_08796 [Saprolegnia dicli... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G02930NO03G02930Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO03G02930.1NO03G02930.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO03G02930.1.cds1NO03G02930.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO03G02930.1.cds2NO03G02930.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO03G02930.1.cds3NO03G02930.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO03G02930.1 ID=NO03G02930.1|Name=NO03G02930.1|organism=Nannochloropsis oceanica|type=mRNA|length=3833bp
GCTGCTGCTGCTGCTGCTGCTGCTAACGAGAGGCCGTGCTAGGGAGAGGC
TGGGGATGAGTTGGGATGAGTACTACTAAAGTATGTGTTTGCCTCTGTGA
AATCGGCCACCCCTCTGCCTCTCTGTCTACCACCAGCCACTCCGTGATAG
ACAGCCCCCAACTGTGCTGCGCATGCGTATTGTTGTGCCGACAGGGGTTT
TGGGGGCGGACGATGACAGGATGACACGCCTTCAAGGAGTCCTCGCTAAA
GGAAAGGAGAAGCTTGCATAATGTCTCAAGGACAACACAAGCAACTCAAT
CGCACCAATCCACGCCCACCCTCCTCGCAACACACAATACAGGACAGTCG
CCGCGTCCGTGTTGGTCCTTAAGGCTCGGCGTGTAGGGCCAAGTAGCGAA
GACCGGCCACTTGACTCCCTTGCTTTGGCCCGTCCCCCACATCATCACCC
TCTTCCCGCCCCGCTTATCTACTGGAAGTGCTCCAACCCCGCATGAGCTA
TGGCGGATTTAGCCAGCAGCATCATGAACATGAGTAGCAGTATGCGCGGA
GACTTCTTCGAGCTGGTCAAGGCCATCGGGGAGTGTCGGTCCAAGCAAGA
AGAGGATAGAATCATTCTAGACGAGATCGCTGTCCTGAAGTCGAAGATAG
GGATGCAGGCCACATTCAGTAAGAAGATGAAGGAGTACCTGGTGCGCCTC
ATCTACTGCGAGATGTTGGGCCACGATGCCTCCTTCGGCTACATCAAGGC
CGTGGAACTCAGCGCCTCAAGCAACCTCCTGCAGAAGCGCGTGGGCTACC
TGACGGCCAGCTTGTGCCTGGCACCCGAGCATGAGTTTCGCTTCATGCTG
GTGAACCAGTTCACGCGTGACATGGCCTCAATCAACTACCTGGAGGTCTG
CGCCGCCCTCAACGCCGTCTGCCGCCTTGCCACTGTCGACACCATTCCCG
CCCTGCTCCCCGAGGTCACCAACAAGCTCCGGCACGAGCAGGAAGCCGTG
CGCAAGAAGGCCGTCATGGCTCTCCAAAAGTTTCATAGCCTTCAACCCAA
TTCCATCGCCCACCTCGACGATCGCATCCGCCGCGCCCTCTGCGACAAGG
ACCCCTCCGTCATGGCCGCCGTGCTCTGCCTCCTTCTCGACCTGATCCGG
GCCTCCCCTGCGCCATACCGGGACCTGGTTCCGAGTTTTGTCAGTATTCT
CAAACAGATTGCGGACCACAGGCTGCCACGCGACTACGACTACCACCGCG
TGCCCGCCCCTTGGATCCAATTGCATTTGCTCCGCATTTTGGCCTTGCTG
GGGGCCTCGGACCAGCGCAGCAGCGAGGGCATGTACGAGGTGCTGGTGGA
CGTGATGCGGCGCGCAGATACAGGCATCAACGTAGGATACGCCATAGTCT
ACGAGTGCGTGCGGACGGTGACCAGCATTTACCCCAACACGGTGTTGCTA
GATGCAGCAGCGGGCAGCATTGCGCGCTTTATCGGCTCGGACAACCACAA
CCTGAAGTACCTTGGCGTGAAGGGACTGGCTGCCATCGTCAAAGACCATC
CGCGCTACGCAGCACAGCATCAGCTGGCCGTCATCGACTGCCTGGAGGAT
CCGGACGAGACCCTCAAGCGCAAGACGCTGGATCTGCTGCACCGCATGAC
CAACCCCGTGAATGTCGAGTTCATCACGGCAAAGCTTCTTGAGTTCCTGG
AGAAGGCCACCGATCCTTTTCTACGCTCGGACCTCGTGCACCGCATCTCC
AACTCCGCCGAGCGCTACGCCCCCTCGACCTCCTGGTACATACAGACCAT
GACACGGATATTTCTCCTGGCGGGCGATTTGGTCAAACCCGAAGCAGCCC
ACACCTTGATGCAGCTCATCGCCGAGGGCACAGGGGAAGACGACGTGGCC
GACGAGCAACTCCGCAAGGACGCTGTGGAGAATTATGTATCTCTCCTTCT
GGACGACACTTCCATCGCCACTGGCGGCGGTGCTCTTCTGCCCGACATCC
TGGTGCAAACCATGTCCTGGACTCTAGGTGAGTACGGCTACCTTTCCGAG
CGCCTTCCGCAAACCGAGATCATGACACGCCTGGCTGCTGACATCGCCCA
CCGGCCTTTCCATGACCCCTGCACTCGGGGTTTTGTGGTGGCAAGCGTCG
TCAAGCTTGTGGCCCAGACAGGCACTTGCCCCGCCGCCGTCTCCTCCCTT
CTCAAGCTTTACGGCCAGTCTTGGAACCTGGACCTGCAACAGCGCTGCCT
GGAGTTCTCCGCCCTGCTCCGGATGCCGGAGGTCATGGTAAATGTACTGC
CCATGGACGCTAGCTGCGAGGATCTGGGGGTTGACGAGAGTCTCCATTTC
TTGGACTCCTACGTAGAGGCTGCCGTCGCTCAAGGCGCGCCGAGATATTG
TCCTCCTCCAAAGCACGCCGACGTCCTCGCCCTGGCGGAGGGGCGGGAAT
TGAAGGAGCCAGGTTTGAAGCTGACACCCTACGCCAAACCTGAGATGCCA
TCCCCAGCCCCCGCCATACCAGGTGGCGCTGGCAGTGGCAACCTGCTTGC
TGGTCTTTCTCTTAATTCTGCTTCGCTCTCGTCTGGTGGTGGAGGAGTAG
GGCTCCAGAAGCCTGCTGCTGGGCCAAGACAAGGTCCACGACAAGGCTTG
CGGCCAGTAGCCCAAGTTTGGAGCCGACAAGGAGCAATGGTGGGGTCCAA
AGTCTCGGCAGCCTCCAGCGGTACTCCTCCGGGAGTGGCGCCTTCACCTA
TTGCACAAACGCTTGTGTCCTCAGGTCCAGCACAGGAAGCGATCGAAGGC
CAGGCAGCGTCGAACGTGGAGAAAAAGAGGTCGACTGGCAGTGGAAGCCG
GCAGGAAGCTTCCACTCCACGTGAGATGACGGAGAAGGAGAAGATGGCTC
AAGCACTATTTGGTGGCATGGGAGCATCATCTTCTACAGGCGTTGGACGC
GCACCCTGGGGTGTGAACGGGTCTGGAGGTGGTGGCGGCGCTGCGGAGAC
AACAGCGTCCAGATCTGCAGGACAAAGCGGGAAGCAGCAGCTATCTTCCA
CTTGTGCTGACGGCGGCGTTGACCTGTTAGATATGGACGGCACAGCCATC
AACGGCAGTACAAAAGGCTCCCGCGCATCGGCCCCTGCTTTTCCTTTGTC
CTCGTCTCCCCATGCATCAACAAAAGTCAGCACAGCCGCCACACCTTCGT
TGCTCGACTTCAGCGACGAGAAGATCGTCTCGAAACCTAAATCAGCGCCT
GCCTCGGTACCCACTCCCACTTTCTCCGCTGCTTCCACGTCCTCGTCCTC
GTCCTCCTCCCTGTCCTCCACCCCTGCCCAAGTGGACCCTTTTGCTTCCT
TGTCCAGTGTTATACCTCATGACCCGCAGCCCAGCCTGTCGAGTGGAGCA
CGTTTTTCGCACAATGGACGCGGACTGCAACCACTTGCCATCAATACACA
AGAATTTGGCGCCCTCTGGACGCAGATGTGCTTTCAAGCGCCGGCGCAGG
GCACTCAAACCTCTATCCGAGACCTGGATGCGCTGGCGGCAGCTTTGCAA
CAGGAAGTAGGATTACATGTGGTTGAGTCGATTCCCCGTACGGCCGAGGT
CATCGCTGCGGGCCGGCTGGGTCCGGACGGAGGAACCACTCTTTTGGTGC
ACGCGAAGCTGCATGCCCAGAGCGGGTCGGCAGACTGCCTGATCAAATGC
AACGACAGCGTCCTGGCTCAACACCTCGGCAAGCATCTAGTCAAAGCCTT
GCGTCGATAGACCCAAGCAGCCCGAAGAACAGTAAACTTTAGTCCAACGA
GAAAGGAAGTAGCGTATGAGAGGTGAAAATTTG
back to top

protein sequence of NO03G02930.1

>NO03G02930.1-protein ID=NO03G02930.1-protein|Name=NO03G02930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1087bp
MADLASSIMNMSSSMRGDFFELVKAIGECRSKQEEDRIILDEIAVLKSKI
GMQATFSKKMKEYLVRLIYCEMLGHDASFGYIKAVELSASSNLLQKRVGY
LTASLCLAPEHEFRFMLVNQFTRDMASINYLEVCAALNAVCRLATVDTIP
ALLPEVTNKLRHEQEAVRKKAVMALQKFHSLQPNSIAHLDDRIRRALCDK
DPSVMAAVLCLLLDLIRASPAPYRDLVPSFVSILKQIADHRLPRDYDYHR
VPAPWIQLHLLRILALLGASDQRSSEGMYEVLVDVMRRADTGINVGYAIV
YECVRTVTSIYPNTVLLDAAAGSIARFIGSDNHNLKYLGVKGLAAIVKDH
PRYAAQHQLAVIDCLEDPDETLKRKTLDLLHRMTNPVNVEFITAKLLEFL
EKATDPFLRSDLVHRISNSAERYAPSTSWYIQTMTRIFLLAGDLVKPEAA
HTLMQLIAEGTGEDDVADEQLRKDAVENYVSLLLDDTSIATGGGALLPDI
LVQTMSWTLGEYGYLSERLPQTEIMTRLAADIAHRPFHDPCTRGFVVASV
VKLVAQTGTCPAAVSSLLKLYGQSWNLDLQQRCLEFSALLRMPEVMVNVL
PMDASCEDLGVDESLHFLDSYVEAAVAQGAPRYCPPPKHADVLALAEGRE
LKEPGLKLTPYAKPEMPSPAPAIPGGAGSGNLLAGLSLNSASLSSGGGGV
GLQKPAAGPRQGPRQGLRPVAQVWSRQGAMVGSKVSAASSGTPPGVAPSP
IAQTLVSSGPAQEAIEGQAASNVEKKRSTGSGSRQEASTPREMTEKEKMA
QALFGGMGASSSTGVGRAPWGVNGSGGGGGAAETTASRSAGQSGKQQLSS
TCADGGVDLLDMDGTAINGSTKGSRASAPAFPLSSSPHASTKVSTAATPS
LLDFSDEKIVSKPKSAPASVPTPTFSAASTSSSSSSSLSSTPAQVDPFAS
LSSVIPHDPQPSLSSGARFSHNGRGLQPLAINTQEFGALWTQMCFQAPAQ
GTQTSIRDLDALAAALQQEVGLHVVESIPRTAEVIAAGRLGPDGGTTLLV
HAKLHAQSGSADCLIKCNDSVLAQHLGKHLVKALRR*
back to top

mRNA from alignment at chr3:880584..885003-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO03G02930.1 ID=NO03G02930.1|Name=NO03G02930.1|organism=Nannochloropsis oceanica|type=mRNA|length=4420bp|location=Sequence derived from alignment at chr3:880584..885003- (Nannochloropsis oceanica)
GCTGCTGCTGCTGCTGCTGCTGCTAACGAGAGGCCGTGCTAGGGAGAGGC TGGGGATGAGTTGGGATGAGTACTACTAAAGTATGTGTTTGCCTCTGTGA AATCGGCCACCCCTCTGCCTCTCTGTCTACCACCAGCCACTCCGTGATAG ACAGCCCCCAACTGTGCTGCGCATGCGTATTGTTGTGCCGACAGGGGTTT TGGGGGCGGACGATGACAGGATGACACGCCTTCAAGGAGTCCTCGCTAAA GGAAAGGAGAAGCTTGCATAATGTCTCAAGGACAACACAAGCAACTCAAT CGCACCAATCCACGCCCACCCTCCTCGCAACACACAATACAGGACAGTCG CCGCGTCCGTGTTGGTCCTTAAGGCTCGGCGTGTAGGGCCAAGTAGCGAA GACCGGCCACTTGACTCCCTTGCTTTGGCCCGTCCCCCACATCATCACCC TCTTCCCGCCCCGCTTATCTACTGGAAGTGCTCCAACCCCGCATGAGCTA TGGCGGATTTAGCCAGCAGCATCATGAACATGAGTAGCAGGTGAGAATAT ATTCAAGGGTGGTATGTACACTTCATCTTCCATCCTTCTACTATCGCAAC GAGTGGCGAGGACCTAGGTCTTCGGCTTCCACTTCCTCGCGTGTCTGTCC GACTCTGTCTCTTCTAGTCTTGCCCAACCAGAAGAAGTTAGAGAGATGGG GAAGGATAAATGCTACCTGATTATATGTGTAGGTAAGGGTCTTAACGCCT GTGCTGATGATGCCCCCGTCTCTGCCTTTTTGTTGCTCGGAATTCTAGGG TTAGGGCGGAATTAGTACCTGCTGTCTGCACGATAGCTTGGTCTCTAGTT CTACTCAATTCACCCATCTCGTGTTCGATCTCCCCTTCTCCCATTCAGCT CGTTCAACTTTTCGTGTACAAATCACCCACTCTCTCATCATCTCCGGCCC CCGCCCACCCCACAGTATGCGCGGAGACTTCTTCGAGCTGGTCAAGGCCA TCGGGGAGTGTCGGTCCAAGCAAGAAGAGGATAGAATCATTCTAGACGAG ATCGCTGTCCTGAAGTCGAAGATAGGGATGCAGGCCACATTCAGTAAGAA GATGAAGGAGTACCTGGTGCGCCTCATCTACTGCGAGATGTTGGGCCACG ATGCCTCCTTCGGCTACATCAAGGCCGTGGAACTCAGCGCCTCAAGCAAC CTCCTGCAGAAGCGCGTGGGCTACCTGACGGCCAGCTTGTGCCTGGCACC CGAGCATGAGTTTCGCTTCATGCTGGTGAACCAGTTCACGCGTGACATGG CCTCAATCAACTACCTGGAGGTCTGCGCCGCCCTCAACGCCGTCTGCCGC CTTGCCACTGTCGACACCATTCCCGCCCTGCTCCCCGAGGTCACCAACAA GCTCCGGCACGAGCAGGAAGCCGTGCGCAAGAAGGCCGTCATGGCTCTCC AAAAGTTTCATAGCCTTCAACCCAATTCCATCGCCCACCTCGACGATCGC ATCCGCCGCGCCCTCTGCGACAAGGACCCCTCCGTCATGGCCGCCGTGCT CTGCCTCCTTCTCGACCTGATCCGGGCCTCCCCTGCGCCATACCGGGACC TGGTTCCGAGTTTTGTCAGTATTCTCAAACAGATTGCGGACCACAGGCTG CCACGCGACTACGACTACCACCGCGTGCCCGCCCCTTGGATCCAATTGCA TTTGCTCCGCATTTTGGCCTTGCTGGGGGCCTCGGACCAGCGCAGCAGCG AGGGCATGTACGAGGTGCTGGTGGACGTGATGCGGCGCGCAGATACAGGC ATCAACGTAGGATACGCCATAGTCTACGAGTGCGTGCGGACGGTGACCAG CATTTACCCCAACACGGTGTTGCTAGATGCAGCAGCGGGCAGCATTGCGC GCTTTATCGGCTCGGACAACCACAACCTGAAGTACCTTGGCGTGAAGGGA CTGGCTGCCATCGTCAAAGACCATCCGCGCTACGCAGCACAGCATCAGCT GGCCGTCATCGACTGCCTGGAGGATCCGGACGAGACCCTCAAGCGCAAGA CGCTGGATCTGCTGCACCGCATGACCAACCCCGTGAATGTCGAGTTCATC ACGGCAAAGCTTCTTGAGTTCCTGGAGAAGGCCACCGATCCTTTTCTACG CTCGGACCTCGTGCACCGCATCTCCAACTCCGCCGAGCGCTACGCCCCCT CGACCTCCTGGTACATACAGACCATGACACGGGTAAGTGCTCGCTGAGCG TACGACGAGGGCATGGAAGTGCTTTTTGTGTGCATTACGAAGGAAGAAAC ACTGACAGATTGCCTGTCCTGACATTTTCTCCTTACCACATCATTTGTAA TATATACTCCATTTTCCCGTTCCTTCGTTCTCTTTTCCCTACAGATATTT CTCCTGGCGGGCGATTTGGTCAAACCCGAAGCAGCCCACACCTTGATGCA GCTCATCGCCGAGGGCACAGGGGAAGACGACGTGGCCGACGAGCAACTCC GCAAGGACGCTGTGGAGAATTATGTATCTCTCCTTCTGGACGACACTTCC ATCGCCACTGGCGGCGGTGCTCTTCTGCCCGACATCCTGGTGCAAACCAT GTCCTGGACTCTAGGTGAGTACGGCTACCTTTCCGAGCGCCTTCCGCAAA CCGAGATCATGACACGCCTGGCTGCTGACATCGCCCACCGGCCTTTCCAT GACCCCTGCACTCGGGGTTTTGTGGTGGCAAGCGTCGTCAAGCTTGTGGC CCAGACAGGCACTTGCCCCGCCGCCGTCTCCTCCCTTCTCAAGCTTTACG GCCAGTCTTGGAACCTGGACCTGCAACAGCGCTGCCTGGAGTTCTCCGCC CTGCTCCGGATGCCGGAGGTCATGGTAAATGTACTGCCCATGGACGCTAG CTGCGAGGATCTGGGGGTTGACGAGAGTCTCCATTTCTTGGACTCCTACG TAGAGGCTGCCGTCGCTCAAGGCGCGCCGAGATATTGTCCTCCTCCAAAG CACGCCGACGTCCTCGCCCTGGCGGAGGGGCGGGAATTGAAGGAGCCAGG TTTGAAGCTGACACCCTACGCCAAACCTGAGATGCCATCCCCAGCCCCCG CCATACCAGGTGGCGCTGGCAGTGGCAACCTGCTTGCTGGTCTTTCTCTT AATTCTGCTTCGCTCTCGTCTGGTGGTGGAGGAGTAGGGCTCCAGAAGCC TGCTGCTGGGCCAAGACAAGGTCCACGACAAGGCTTGCGGCCAGTAGCCC AAGTTTGGAGCCGACAAGGAGCAATGGTGGGGTCCAAAGTCTCGGCAGCC TCCAGCGGTACTCCTCCGGGAGTGGCGCCTTCACCTATTGCACAAACGCT TGTGTCCTCAGGTCCAGCACAGGAAGCGATCGAAGGCCAGGCAGCGTCGA ACGTGGAGAAAAAGAGGTCGACTGGCAGTGGAAGCCGGCAGGAAGCTTCC ACTCCACGTGAGATGACGGAGAAGGAGAAGATGGCTCAAGCACTATTTGG TGGCATGGGAGCATCATCTTCTACAGGCGTTGGACGCGCACCCTGGGGTG TGAACGGGTCTGGAGGTGGTGGCGGCGCTGCGGAGACAACAGCGTCCAGA TCTGCAGGACAAAGCGGGAAGCAGCAGCTATCTTCCACTTGTGCTGACGG CGGCGTTGACCTGTTAGATATGGACGGCACAGCCATCAACGGCAGTACAA AAGGCTCCCGCGCATCGGCCCCTGCTTTTCCTTTGTCCTCGTCTCCCCAT GCATCAACAAAAGTCAGCACAGCCGCCACACCTTCGTTGCTCGACTTCAG CGACGAGAAGATCGTCTCGAAACCTAAATCAGCGCCTGCCTCGGTACCCA CTCCCACTTTCTCCGCTGCTTCCACGTCCTCGTCCTCGTCCTCCTCCCTG TCCTCCACCCCTGCCCAAGTGGACCCTTTTGCTTCCTTGTCCAGTGTTAT ACCTCATGACCCGCAGCCCAGCCTGTCGAGTGGAGCACGTTTTTCGCACA ATGGACGCGGACTGCAACCACTTGCCATCAATACACAAGAATTTGGCGCC CTCTGGACGCAGATGTGCTTTCAAGCGCCGGCGCAGGGCACTCAAACCTC TATCCGAGACCTGGATGCGCTGGCGGCAGCTTTGCAACAGGAAGTAGGAT TACATGTGGTTGAGTCGATTCCCCGTACGGCCGAGGTCATCGCTGCGGGC CGGCTGGGTCCGGACGGAGGAACCACTCTTTTGGTGCACGCGAAGCTGCA TGCCCAGAGCGGGTCGGCAGACTGCCTGATCAAATGCAACGACAGCGTCC TGGCTCAACACCTCGGCAAGCATCTAGTCAAAGCCTTGCGTCGATAGACC CAAGCAGCCCGAAGAACAGTAAACTTTAGTCCAACGAGAAAGGAAGTAGC GTATGAGAGGTGAAAATTTG
back to top

Coding sequence (CDS) from alignment at chr3:880584..885003-

>NO03G02930.1 ID=NO03G02930.1|Name=NO03G02930.1|organism=Nannochloropsis oceanica|type=CDS|length=3261bp|location=Sequence derived from alignment at chr3:880584..885003- (Nannochloropsis oceanica)
ATGGCGGATTTAGCCAGCAGCATCATGAACATGAGTAGCAGTATGCGCGG
AGACTTCTTCGAGCTGGTCAAGGCCATCGGGGAGTGTCGGTCCAAGCAAG
AAGAGGATAGAATCATTCTAGACGAGATCGCTGTCCTGAAGTCGAAGATA
GGGATGCAGGCCACATTCAGTAAGAAGATGAAGGAGTACCTGGTGCGCCT
CATCTACTGCGAGATGTTGGGCCACGATGCCTCCTTCGGCTACATCAAGG
CCGTGGAACTCAGCGCCTCAAGCAACCTCCTGCAGAAGCGCGTGGGCTAC
CTGACGGCCAGCTTGTGCCTGGCACCCGAGCATGAGTTTCGCTTCATGCT
GGTGAACCAGTTCACGCGTGACATGGCCTCAATCAACTACCTGGAGGTCT
GCGCCGCCCTCAACGCCGTCTGCCGCCTTGCCACTGTCGACACCATTCCC
GCCCTGCTCCCCGAGGTCACCAACAAGCTCCGGCACGAGCAGGAAGCCGT
GCGCAAGAAGGCCGTCATGGCTCTCCAAAAGTTTCATAGCCTTCAACCCA
ATTCCATCGCCCACCTCGACGATCGCATCCGCCGCGCCCTCTGCGACAAG
GACCCCTCCGTCATGGCCGCCGTGCTCTGCCTCCTTCTCGACCTGATCCG
GGCCTCCCCTGCGCCATACCGGGACCTGGTTCCGAGTTTTGTCAGTATTC
TCAAACAGATTGCGGACCACAGGCTGCCACGCGACTACGACTACCACCGC
GTGCCCGCCCCTTGGATCCAATTGCATTTGCTCCGCATTTTGGCCTTGCT
GGGGGCCTCGGACCAGCGCAGCAGCGAGGGCATGTACGAGGTGCTGGTGG
ACGTGATGCGGCGCGCAGATACAGGCATCAACGTAGGATACGCCATAGTC
TACGAGTGCGTGCGGACGGTGACCAGCATTTACCCCAACACGGTGTTGCT
AGATGCAGCAGCGGGCAGCATTGCGCGCTTTATCGGCTCGGACAACCACA
ACCTGAAGTACCTTGGCGTGAAGGGACTGGCTGCCATCGTCAAAGACCAT
CCGCGCTACGCAGCACAGCATCAGCTGGCCGTCATCGACTGCCTGGAGGA
TCCGGACGAGACCCTCAAGCGCAAGACGCTGGATCTGCTGCACCGCATGA
CCAACCCCGTGAATGTCGAGTTCATCACGGCAAAGCTTCTTGAGTTCCTG
GAGAAGGCCACCGATCCTTTTCTACGCTCGGACCTCGTGCACCGCATCTC
CAACTCCGCCGAGCGCTACGCCCCCTCGACCTCCTGGTACATACAGACCA
TGACACGGATATTTCTCCTGGCGGGCGATTTGGTCAAACCCGAAGCAGCC
CACACCTTGATGCAGCTCATCGCCGAGGGCACAGGGGAAGACGACGTGGC
CGACGAGCAACTCCGCAAGGACGCTGTGGAGAATTATGTATCTCTCCTTC
TGGACGACACTTCCATCGCCACTGGCGGCGGTGCTCTTCTGCCCGACATC
CTGGTGCAAACCATGTCCTGGACTCTAGGTGAGTACGGCTACCTTTCCGA
GCGCCTTCCGCAAACCGAGATCATGACACGCCTGGCTGCTGACATCGCCC
ACCGGCCTTTCCATGACCCCTGCACTCGGGGTTTTGTGGTGGCAAGCGTC
GTCAAGCTTGTGGCCCAGACAGGCACTTGCCCCGCCGCCGTCTCCTCCCT
TCTCAAGCTTTACGGCCAGTCTTGGAACCTGGACCTGCAACAGCGCTGCC
TGGAGTTCTCCGCCCTGCTCCGGATGCCGGAGGTCATGGTAAATGTACTG
CCCATGGACGCTAGCTGCGAGGATCTGGGGGTTGACGAGAGTCTCCATTT
CTTGGACTCCTACGTAGAGGCTGCCGTCGCTCAAGGCGCGCCGAGATATT
GTCCTCCTCCAAAGCACGCCGACGTCCTCGCCCTGGCGGAGGGGCGGGAA
TTGAAGGAGCCAGGTTTGAAGCTGACACCCTACGCCAAACCTGAGATGCC
ATCCCCAGCCCCCGCCATACCAGGTGGCGCTGGCAGTGGCAACCTGCTTG
CTGGTCTTTCTCTTAATTCTGCTTCGCTCTCGTCTGGTGGTGGAGGAGTA
GGGCTCCAGAAGCCTGCTGCTGGGCCAAGACAAGGTCCACGACAAGGCTT
GCGGCCAGTAGCCCAAGTTTGGAGCCGACAAGGAGCAATGGTGGGGTCCA
AAGTCTCGGCAGCCTCCAGCGGTACTCCTCCGGGAGTGGCGCCTTCACCT
ATTGCACAAACGCTTGTGTCCTCAGGTCCAGCACAGGAAGCGATCGAAGG
CCAGGCAGCGTCGAACGTGGAGAAAAAGAGGTCGACTGGCAGTGGAAGCC
GGCAGGAAGCTTCCACTCCACGTGAGATGACGGAGAAGGAGAAGATGGCT
CAAGCACTATTTGGTGGCATGGGAGCATCATCTTCTACAGGCGTTGGACG
CGCACCCTGGGGTGTGAACGGGTCTGGAGGTGGTGGCGGCGCTGCGGAGA
CAACAGCGTCCAGATCTGCAGGACAAAGCGGGAAGCAGCAGCTATCTTCC
ACTTGTGCTGACGGCGGCGTTGACCTGTTAGATATGGACGGCACAGCCAT
CAACGGCAGTACAAAAGGCTCCCGCGCATCGGCCCCTGCTTTTCCTTTGT
CCTCGTCTCCCCATGCATCAACAAAAGTCAGCACAGCCGCCACACCTTCG
TTGCTCGACTTCAGCGACGAGAAGATCGTCTCGAAACCTAAATCAGCGCC
TGCCTCGGTACCCACTCCCACTTTCTCCGCTGCTTCCACGTCCTCGTCCT
CGTCCTCCTCCCTGTCCTCCACCCCTGCCCAAGTGGACCCTTTTGCTTCC
TTGTCCAGTGTTATACCTCATGACCCGCAGCCCAGCCTGTCGAGTGGAGC
ACGTTTTTCGCACAATGGACGCGGACTGCAACCACTTGCCATCAATACAC
AAGAATTTGGCGCCCTCTGGACGCAGATGTGCTTTCAAGCGCCGGCGCAG
GGCACTCAAACCTCTATCCGAGACCTGGATGCGCTGGCGGCAGCTTTGCA
ACAGGAAGTAGGATTACATGTGGTTGAGTCGATTCCCCGTACGGCCGAGG
TCATCGCTGCGGGCCGGCTGGGTCCGGACGGAGGAACCACTCTTTTGGTG
CACGCGAAGCTGCATGCCCAGAGCGGGTCGGCAGACTGCCTGATCAAATG
CAACGACAGCGTCCTGGCTCAACACCTCGGCAAGCATCTAGTCAAAGCCT
TGCGTCGATAG
back to top
Synonyms
Publications