NO03G00510.1, NO03G00510.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO03G00510.1
Unique NameNO03G00510.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1089
Alignment locationchr3:160040..161234 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:160040..161234 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO03G00510.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G00510NO03G00510Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO03G00510.1NO03G00510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO03G00510.1.cds1NO03G00510.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO03G00510.1.cds2NO03G00510.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO03G00510.1 ID=NO03G00510.1|Name=NO03G00510.1|organism=Nannochloropsis oceanica|type=mRNA|length=1089bp
ATGCCATCCCATGACAACTACCACGGTTCATTCTCAATTGAGAATAATGC
CATCCAGCACGCTGAGAACATCAAGCTCCAGCACGTGGCTGAAAGCTTAG
AACATGACAAATCTCGTGTCTCAGACCTCTACGAGCAAGCTGCCCGTTAC
AAAGCCCGCAGCACCGTGCTGGACCGGGATCTCGTGCGTTTACGTGCCCA
GGTTGAAGAGCTGTCGGTAGAGGTTTCGACGTTGTCGGGTCGCATCGCCC
AAGAATACGAAACCCTTGCGCAGCTACACAAGATGGAAGTCGAGCTAGAA
AAAGAACATAAGCAAAACACGGCGAAGCTGCAGGAGTTTGAGGCGGCCTG
TCAAGAGAGGAATTCGGAGAAAGAGAGGATGATGGCGAGGGTGGCACGGG
AGCAGCGGGCTTGGAATAAAGGGTTGATGGTAGTGGAAAAGAAGGCGCGT
GAGTTGCTAAAAAGCCCCATAGGTGTGACAAAGCTGAAGGAAAGGAAGTT
GAGAGCGTGGGGGAAGCGGGAGGAAGTCCGGGGCCGTGTTGAGACGATTC
ACCGGGAGTTGGAGGAGGTGAACCGAGCCTGGGAAGCAGAGCAGGAAACA
AAGCGGCAGGAGCAGCAGCAGGAGCAGCAGCAGTGGCGGCTGGAGGGAGA
GGATGAAGGGGAGGAGGAGGAGGAAGAGGAGGAGGAGGTTCGCACGGGTG
TTGGAGGGGGAGGGAAGGAGAGGCAGCATTGGCGAGAACTGGGTCGTTTG
CAGGAGCTCCAGCGGGTGCTGAGGGAAGAAGGAGCGGTGTTAGATCGTAA
AATTACCGTGGCACGAGGTCAGATACAGGCGGCGGAAATGGCAGAGGATG
GAAAAAATGCAAGGGAGGAGCTGTTAGAGAAGGAGTTTGGAGGAGGGGAG
GGGAAGGAGACTAGGGGCACGGGTTTTGGGGCTAGTCGCGGGCCGGAGTC
GGATGTGTCGTCGTTGGGATCTCCCTCGATTTATTCGGCGCAGGAGGTTA
AGGAGGGGGAAGAAATGGAAGAAGGGGGAGGAAACTCAGGAGGGGGGGAC
TCAGTAGAGGGGAGGGCTTCGTGCGGGCTACAGAGATAG
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protein sequence of NO03G00510.1

>NO03G00510.1-protein ID=NO03G00510.1-protein|Name=NO03G00510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=363bp
MPSHDNYHGSFSIENNAIQHAENIKLQHVAESLEHDKSRVSDLYEQAARY
KARSTVLDRDLVRLRAQVEELSVEVSTLSGRIAQEYETLAQLHKMEVELE
KEHKQNTAKLQEFEAACQERNSEKERMMARVAREQRAWNKGLMVVEKKAR
ELLKSPIGVTKLKERKLRAWGKREEVRGRVETIHRELEEVNRAWEAEQET
KRQEQQQEQQQWRLEGEDEGEEEEEEEEEVRTGVGGGGKERQHWRELGRL
QELQRVLREEGAVLDRKITVARGQIQAAEMAEDGKNAREELLEKEFGGGE
GKETRGTGFGASRGPESDVSSLGSPSIYSAQEVKEGEEMEEGGGNSGGGD
SVEGRASCGLQR*
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mRNA from alignment at chr3:160040..161234-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO03G00510.1 ID=NO03G00510.1|Name=NO03G00510.1|organism=Nannochloropsis oceanica|type=mRNA|length=1195bp|location=Sequence derived from alignment at chr3:160040..161234- (Nannochloropsis oceanica)
ATGCCATCCCATGACAACTACCACGGTTCATTCTCAATTGAGAATAATGC CATCCAGCACGCTGAGAACATCAAGCTCCAGCACGTGGCTGAAAGTAAGT AGAAGGAAAGAAAATGGGAAAGGGGGGGATGGGAAGACGACGATGCCATG GACTGACTCCGATCTTCCTCCCTTCGTTCCCTCCATATCCCCTATTTCAG GCTTAGAACATGACAAATCTCGTGTCTCAGACCTCTACGAGCAAGCTGCC CGTTACAAAGCCCGCAGCACCGTGCTGGACCGGGATCTCGTGCGTTTACG TGCCCAGGTTGAAGAGCTGTCGGTAGAGGTTTCGACGTTGTCGGGTCGCA TCGCCCAAGAATACGAAACCCTTGCGCAGCTACACAAGATGGAAGTCGAG CTAGAAAAAGAACATAAGCAAAACACGGCGAAGCTGCAGGAGTTTGAGGC GGCCTGTCAAGAGAGGAATTCGGAGAAAGAGAGGATGATGGCGAGGGTGG CACGGGAGCAGCGGGCTTGGAATAAAGGGTTGATGGTAGTGGAAAAGAAG GCGCGTGAGTTGCTAAAAAGCCCCATAGGTGTGACAAAGCTGAAGGAAAG GAAGTTGAGAGCGTGGGGGAAGCGGGAGGAAGTCCGGGGCCGTGTTGAGA CGATTCACCGGGAGTTGGAGGAGGTGAACCGAGCCTGGGAAGCAGAGCAG GAAACAAAGCGGCAGGAGCAGCAGCAGGAGCAGCAGCAGTGGCGGCTGGA GGGAGAGGATGAAGGGGAGGAGGAGGAGGAAGAGGAGGAGGAGGTTCGCA CGGGTGTTGGAGGGGGAGGGAAGGAGAGGCAGCATTGGCGAGAACTGGGT CGTTTGCAGGAGCTCCAGCGGGTGCTGAGGGAAGAAGGAGCGGTGTTAGA TCGTAAAATTACCGTGGCACGAGGTCAGATACAGGCGGCGGAAATGGCAG AGGATGGAAAAAATGCAAGGGAGGAGCTGTTAGAGAAGGAGTTTGGAGGA GGGGAGGGGAAGGAGACTAGGGGCACGGGTTTTGGGGCTAGTCGCGGGCC GGAGTCGGATGTGTCGTCGTTGGGATCTCCCTCGATTTATTCGGCGCAGG AGGTTAAGGAGGGGGAAGAAATGGAAGAAGGGGGAGGAAACTCAGGAGGG GGGGACTCAGTAGAGGGGAGGGCTTCGTGCGGGCTACAGAGATAG
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Coding sequence (CDS) from alignment at chr3:160040..161234-

>NO03G00510.1 ID=NO03G00510.1|Name=NO03G00510.1|organism=Nannochloropsis oceanica|type=CDS|length=1089bp|location=Sequence derived from alignment at chr3:160040..161234- (Nannochloropsis oceanica)
ATGCCATCCCATGACAACTACCACGGTTCATTCTCAATTGAGAATAATGC
CATCCAGCACGCTGAGAACATCAAGCTCCAGCACGTGGCTGAAAGCTTAG
AACATGACAAATCTCGTGTCTCAGACCTCTACGAGCAAGCTGCCCGTTAC
AAAGCCCGCAGCACCGTGCTGGACCGGGATCTCGTGCGTTTACGTGCCCA
GGTTGAAGAGCTGTCGGTAGAGGTTTCGACGTTGTCGGGTCGCATCGCCC
AAGAATACGAAACCCTTGCGCAGCTACACAAGATGGAAGTCGAGCTAGAA
AAAGAACATAAGCAAAACACGGCGAAGCTGCAGGAGTTTGAGGCGGCCTG
TCAAGAGAGGAATTCGGAGAAAGAGAGGATGATGGCGAGGGTGGCACGGG
AGCAGCGGGCTTGGAATAAAGGGTTGATGGTAGTGGAAAAGAAGGCGCGT
GAGTTGCTAAAAAGCCCCATAGGTGTGACAAAGCTGAAGGAAAGGAAGTT
GAGAGCGTGGGGGAAGCGGGAGGAAGTCCGGGGCCGTGTTGAGACGATTC
ACCGGGAGTTGGAGGAGGTGAACCGAGCCTGGGAAGCAGAGCAGGAAACA
AAGCGGCAGGAGCAGCAGCAGGAGCAGCAGCAGTGGCGGCTGGAGGGAGA
GGATGAAGGGGAGGAGGAGGAGGAAGAGGAGGAGGAGGTTCGCACGGGTG
TTGGAGGGGGAGGGAAGGAGAGGCAGCATTGGCGAGAACTGGGTCGTTTG
CAGGAGCTCCAGCGGGTGCTGAGGGAAGAAGGAGCGGTGTTAGATCGTAA
AATTACCGTGGCACGAGGTCAGATACAGGCGGCGGAAATGGCAGAGGATG
GAAAAAATGCAAGGGAGGAGCTGTTAGAGAAGGAGTTTGGAGGAGGGGAG
GGGAAGGAGACTAGGGGCACGGGTTTTGGGGCTAGTCGCGGGCCGGAGTC
GGATGTGTCGTCGTTGGGATCTCCCTCGATTTATTCGGCGCAGGAGGTTA
AGGAGGGGGAAGAAATGGAAGAAGGGGGAGGAAACTCAGGAGGGGGGGAC
TCAGTAGAGGGGAGGGCTTCGTGCGGGCTACAGAGATAG
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Synonyms
Publications