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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr2 | genome | chr2:747237..750686 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO02G02730.1 vs.
Match: EWM30406.1 (adenosine 3 -phospho 5 -phosphosulfate transporter 2 [Nannochloropsis gaditana]) HSP 1 Score: 610.1 bits (1572), Expect = 6.200e-171 Identity = 346/508 (68.11%), Postives = 399/508 (78.54%), Query Frame = 0
Query: 1 MRARLTQATGAASSQTSSLGGVEDLDHDDHVVLSVLDDGVGHNSELLRRSESNAASVVPKQRSSLSFLSLGGSSSKARKHIELGNPH---------GAGIALGGMADDAALSAATAAGGKESWRDREAGSDVHHGHERPSFRVIGVQISHMSRTGQFLFCTFGVFSFLLVYGFLQEYMVIHVFQRQLGIFLTLCQFAGYSSLAALHRLIHADTPRRIPLGYYVLLATLQATMQGLTNLSMRWLNYPAKMLFKSSRVIPTMIVGVFIMKKRYKMKDYMVVALLSLGLVFFIQADVKVSPSFHPLGIIFISMALVVDAAIVNIQEYTLRRYDASHDELIFYSYGIGSFILFAYCLFSMELYDGIVFLRSQPPRSTLCLIIFCFCGYFGVTCVAALTKKFGALASTMTTTARKALTLFLSFFIFPKPATGMHVFGGVLFVLGLSVKAVPTGRNKDYASSSSASSSIPSTSSAATLLSPSCSSPSHASMKSKQTRSLLSSSA--AVPPSSSS 498
MRARL QA G L ++ + + V LS++D+ GH+ E LRRSES+A+ + PKQR S + S + RKH+ LG P +G D A++ AATAAG ++WR S HHGH+RPSFRVIGVQISH++RTGQFLFCT GVFSFLLVYGFLQEYMVIHVF+R+LGIFLTLCQF+GYSSLAALHRLIHADTPRRIP GYY+LLA+LQA MQGLTNLSMRWLNYPAKMLFKSSRVIPTM+VG+ IMKKRYK+KDY+VVALLSLGLVFF+QADVKVSPSFHPLGIIFI MAL VDAAIVNIQE+TLR+YDASHDELIFYSYG+GS ILF YCL S EL++GIVFL+S R+T CL++FC CGYFGVTCVAALTKKFGALASTMTTTARKALTLFLSFFIFPKPATGMHV GG+LFV GLSVKA+PTGRNKD S A+S +PS+S A +K++QTRSLLSSSA + P+++S
Sbjct: 1 MRARLLQAAGVG---WPPLSRNQESEPAELVNLSIMDEDTGHSYEHLRRSESSASGMPPKQRLGQSIVGGETISGRIRKHLGLGAPDVDSQNGQTSESGSTFRPPVDAASIPAATAAG--KTWRSH--ASQAHHGHDRPSFRVIGVQISHLTRTGQFLFCTLGVFSFLLVYGFLQEYMVIHVFERRLGIFLTLCQFSGYSSLAALHRLIHADTPRRIPFGYYILLASLQALMQGLTNLSMRWLNYPAKMLFKSSRVIPTMLVGILIMKKRYKVKDYVVVALLSLGLVFFVQADVKVSPSFHPLGIIFICMALAVDAAIVNIQEFTLRKYDASHDELIFYSYGLGSIILFIYCLLSWELFEGIVFLQSHGLRATCCLLVFCSCGYFGVTCVAALTKKFGALASTMTTTARKALTLFLSFFIFPKPATGMHVVGGLLFVSGLSVKAIPTGRNKD--DPSIATSYLPSSSCVA--------------LKAQQTRSLLSSSAVKTIGPTTTS 485
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO02G02730.1 ID=NO02G02730.1|Name=NO02G02730.1|organism=Nannochloropsis oceanica|type=mRNA|length=3257bp AAAGACACCAAGGTACTCTCAGACATGTCCTAGCCAGAGGCTTCGGTCCC TTTAGCTCCTTTCTGCACTTCACGGCGGTGCCTCGGCCGACTCACCTCGA ACTAGAACAACACGGCTTTCCGCATCTGCCTTCCAAGCAAGTGGCAGCAG TGGCAGCAGCAACAGCAGACAAGTGCGCGCTTATAATAGAGCCCAAAGCT TCGGAATTACACAGAGATGCGGGCAAGGCTCACCCAGGCCACGGGCGCAG CAAGCTCTCAAACATCGTCGTTAGGGGGAGTGGAAGACCTAGACCATGAC GACCATGTTGTACTCTCGGTGCTGGACGACGGTGTGGGCCACAACTCCGA GTTGTTGCGGAGAAGCGAGTCGAATGCCGCGAGTGTAGTACCTAAGCAGC GCTCGAGTCTGAGTTTCCTCAGTTTAGGCGGGAGTAGCAGCAAGGCCCGG AAGCACATAGAATTGGGAAACCCGCATGGCGCGGGCATTGCGCTCGGAGG TATGGCTGATGATGCAGCTCTCTCGGCAGCTACGGCAGCGGGAGGTAAGG AGAGTTGGAGAGATCGAGAGGCGGGCAGCGACGTTCACCATGGGCATGAA CGGCCATCTTTCCGGGTGATCGGTGTGCAGATCTCACACATGTCACGGAC GGGGCAGTTTCTGTTCTGTACTTTTGGGGTCTTTTCTTTTTTGTTGGTAT ACGGGTTCCTTCAGGAGTATATGGTTATTCACGTCTTCCAGCGGCAGTTG GGCATCTTCTTGACTTTGTGTCAATTTGCGGGTTACTCGTCATTGGCGGC TTTGCATCGGCTCATTCATGCGGATACGCCACGGAGAATCCCGTTGGGGT ACTACGTCTTGCTGGCGACGCTGCAAGCGACGATGCAGGGGTTGACGAAT TTGTCAATGCGGTGGTTGAACTACCCGGCGAAGATGTTGTTCAAGTCTTC GAGGGTGATTCCGACAATGATCGTGGGGGTTTTCATCATGAAGAAGCGGT ACAAGATGAAAGACTACATGGTCGTCGCCCTTCTATCCCTGGGCCTCGTC TTCTTCATCCAAGCCGACGTGAAAGTATCCCCCTCCTTTCATCCTCTGGG GATAATTTTCATCTCCATGGCTCTAGTCGTCGATGCGGCCATAGTGAACA TCCAGGAATACACCTTGAGGAGATACGACGCTAGCCATGACGAACTCATC TTCTACTCCTACGGCATTGGATCGTTCATCCTTTTTGCCTACTGCCTCTT CTCCATGGAGCTTTACGATGGCATCGTATTTCTCCGCTCCCAGCCCCCTC GCAGCACCCTCTGTCTCATCATTTTCTGTTTCTGCGGCTACTTCGGTGTC ACCTGCGTGGCGGCCCTGACCAAGAAATTCGGTGCTCTTGCCTCGACTAT GACGACAACCGCACGGAAAGCCTTGACACTCTTTCTTTCCTTCTTCATCT TTCCGAAACCTGCCACGGGGATGCATGTTTTTGGGGGGGTCCTTTTCGTG TTGGGGCTGTCCGTTAAAGCTGTGCCCACAGGCCGGAACAAGGATTATGC TTCCTCTTCCTCCGCCTCCTCCTCCATCCCCTCCACCTCTTCGGCCGCAA CGTTACTATCCCCTTCTTGTTCCTCCCCCTCGCATGCATCCATGAAGTCA AAACAAACACGTTCGTTGCTCTCCTCGTCCGCGGCAGTGCCACCATCATC ATCATCATCATCATCGGCAGCGGCATCAGCAGTTGCCACCTCGCATCAGG CGATGGGGAGCATCGCAAAAAGCATAGAATTAGTCTAATGCATAAAATTA GAACGAATAGAATGAGAATCTTGTCCAAATTTGCAAAAGTCGCTCCATCC ATCTCTCTTCCCTCTCCTTGCTTGTGTATATGGTTTAGAGCGAGTGAGAG AGTGAGGGGTTGCTTATCTGCCTTTCCAAAGAAATGGATGGGGGCCCGGG GAAATCATTGCTCGAAATAAATGGAGGGATCGAAGTAGAAGAAGCGGCAG CTGTTTTTATCCCTCCTATGTGCTCTGCGTCGCATGCCCGTCCAGCTTAA GCTTACCGACCGAAAAACAATAAAAGTCACTCAATCAAAGCAAAGAACAA AGTCCAAGAAACAAACTGCAATGTGGAGACTTCACTAGATTCTTGAGGGT CTTTTCTCTGGCGTGTATCTCCACTATTTTACTTGTTCAACCAGTCTTTT GAATAGTCCTAGAGTGTTTGTGGTCACACATTCCTTGTAGTATTTATTTT ATATACACTTCCCTACACCAATAGGTATTTTCCCAACACAAGCATCATCA TCATCATCAGCAGCAGCAGCAGCAGCAGCACACAGCAGCAGCAGCACACA GCAGCACTCAGCAGTAGCAGTATTGGGACCCTAATCCCTAGAGTCACCAT CAACACCACCATCAGCAGCAGCAGCAAGCTGTTCGATCTTCAGCCCGATC CTCCTCCTCGCTTCATCAATCGCATCCGGGGTCACACGCGCCGCCAATCT CGTCGTATTAAGCTTCGGAGACCGTTCCCTCCCTTCTTCACTCCCACCCT CCGTCACATAAAGATGCGCCAAATACTTCGTCATGATCAAGACATACATC CCGCAGTCATACCCGTTCACCTGCTGTGGACATCCCCGCACAGCTTCCAC CTTCCCTCCCTCCTTCCCTCCCTCCTTCCCTGCCACCATGCGCCAAAACT GAGCAGCTGTCCTTTTGGCGGCTGGTTCATTCCTACCACCGCTCGAGTCG AGGTGGAAGAATTTCCCGGGCTGAGCGCTGCTGCCGTTGCCAGCGCTGTA GACGAGAAGGCTCCTGATAGTGGATGTGTGTAATAGGTTCTGTGAGTGTC GTGGAGGAATGAAAGAGACCCTGTGAGAAACGGACGGGGTAGGAAAAGAA GCAAAGTTGTCACACGCATGCAGACCTCCGAGGAGAACGGTGACATGCTA ACATACATACCAGTGCGTGCAATCACTCCTGAAATCCTCGGCGTCGTTGA CGGGGATGAAGACCATGCTTCGTCTATCCAGCTTCAAGCCCTCCCCCACT TCCTCCAACTCGCCTTGGTCTACGATACAATTTTAAGTAATGGATTCCCA AATAAGTTTCCATAAAACAATGGATGTCACGGAGGTTACAAATTCATATG AGAGCTCCTACCAAGAGCCGTCACTTTTTGCTCTTCAAATTTTTGCAGAT CTGTCCCTGCACCGCCCGTCCTCCCTCCCTTCTTCATTCTATTCGGCCCC TCCCCCC back to topprotein sequence of NO02G02730.1 >NO02G02730.1-protein ID=NO02G02730.1-protein|Name=NO02G02730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=524bp MRARLTQATGAASSQTSSLGGVEDLDHDDHVVLSVLDDGVGHNSELLRRS ESNAASVVPKQRSSLSFLSLGGSSSKARKHIELGNPHGAGIALGGMADDA ALSAATAAGGKESWRDREAGSDVHHGHERPSFRVIGVQISHMSRTGQFLF CTFGVFSFLLVYGFLQEYMVIHVFQRQLGIFLTLCQFAGYSSLAALHRLI HADTPRRIPLGYYVLLATLQATMQGLTNLSMRWLNYPAKMLFKSSRVIPT MIVGVFIMKKRYKMKDYMVVALLSLGLVFFIQADVKVSPSFHPLGIIFIS MALVVDAAIVNIQEYTLRRYDASHDELIFYSYGIGSFILFAYCLFSMELY DGIVFLRSQPPRSTLCLIIFCFCGYFGVTCVAALTKKFGALASTMTTTAR KALTLFLSFFIFPKPATGMHVFGGVLFVLGLSVKAVPTGRNKDYASSSSA SSSIPSTSSAATLLSPSCSSPSHASMKSKQTRSLLSSSAAVPPSSSSSSS AAASAVATSHQAMGSIAKSIELV* back to topmRNA from alignment at chr2:747237..750686+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO02G02730.1 ID=NO02G02730.1|Name=NO02G02730.1|organism=Nannochloropsis oceanica|type=mRNA|length=3450bp|location=Sequence derived from alignment at chr2:747237..750686+ (Nannochloropsis oceanica) AAAGACACCAAGGTACTCTCAGACATGTCCTAGCCAGAGGCTTCGGTCCC
TTTAGCTCCTTTCTGCACTTCACGGCGGTGCCTCGGCCGACTCACCTCGA
ACTAGAACAACACGGCTTTCCGCATCTGCCTTCCAAGCAAGTGGCAGCAG
TGGCAGCAGCAACAGCAGACAAGTGCGCGCTTATAATAGAGCCCAAAGCT
TCGGAATTACACAGAGATGCGGGCAAGGCTCACCCAGGTAGGAATGCGGC
AGCCTCTATGCACCGTTCACCCTTTCTCATCATCCCACCATTACCACCCT
CAAATAATCAGGCCACGGGCGCAGCAAGCTCTCAAACATCGTCGTTAGGG
GGAGTGGAAGACCTAGACCATGACGACCATGTTGTACTCTCGGTGCTGGA
CGACGGTGTGGGCCACAACTCCGAGTTGTTGCGGAGAAGCGAGTCGAATG
CCGCGAGTGTAGTACCTAAGCAGCGCTCGAGTCTGAGTTTCCTCAGTTTA
GGCGGGAGTAGCAGCAAGGCCCGGAAGCACATAGAATTGGGAAACCCGCA
TGGCGCGGGCATTGCGCTCGGAGGTATGGCTGATGATGCAGCTCTCTCGG
CAGCTACGGCAGCGGGAGGTAAGGAGAGTTGGAGAGATCGAGAGGCGGGC
AGCGACGTTCACCATGGGCATGAACGGCCATCTTTCCGGGTGATCGGTGT
GCAGATCTCACACATGTCACGGACGGGGCAGTTTCTGTTCTGTACTTTTG
GGGTCTTTTCTTTTTTGTTGGTATACGGGTTCCTTCAGGAGTATATGGTT
ATTCACGTCTTCCAGCGGCAGTTGGGCATCTTCTTGACTTTGTGTCAATT
TGCGGGTTACTCGTCATTGGCGGCTTTGCATCGGCTCATTCATGCGGATA
CGCCACGGAGAATCCCGTTGGGGTACTACGTCTTGCTGGCGACGCTGCAA
GCGACGATGCAGGGGTTGACGAATTTGTCAATGCGGTGGTTGAACTACCC
GGCGAAGATGTTGTTCAAGTCTTCGAGGGTGATTCCGACAATGATCGTGG
GGGTTTTCATCATGAAGAAGCGGTACAAGGTACACTCGTGCTTTTGTGTT
GAGGGGGGTTGTGACGGATTTGTTGGTCGTTCATCTTAAGATTTACGTCT
CACGTACTCCCTTCCGCCCTCCCTCTCTCCCTCCCCAACCTTTCTCAGAT
GAAAGACTACATGGTCGTCGCCCTTCTATCCCTGGGCCTCGTCTTCTTCA
TCCAAGCCGACGTGAAAGTATCCCCCTCCTTTCATCCTCTGGGGATAATT
TTCATCTCCATGGCTCTAGTCGTCGATGCGGCCATAGTGAACATCCAGGA
ATACACCTTGAGGAGATACGACGCTAGCCATGACGAACTCATCTTCTACT
CCTACGGCATTGGATCGTTCATCCTTTTTGCCTACTGCCTCTTCTCCATG
GAGCTTTACGATGGCATCGTATTTCTCCGCTCCCAGCCCCCTCGCAGCAC
CCTCTGTCTCATCATTTTCTGTTTCTGCGGCTACTTCGGTGTCACCTGCG
TGGCGGCCCTGACCAAGAAATTCGGTGCTCTTGCCTCGACTATGACGACA
ACCGCACGGAAAGCCTTGACACTCTTTCTTTCCTTCTTCATCTTTCCGAA
ACCTGCCACGGGGATGCATGTTTTTGGGGGGGTCCTTTTCGTGTTGGGGC
TGTCCGTTAAAGCTGTGCCCACAGGCCGGAACAAGGATTATGCTTCCTCT
TCCTCCGCCTCCTCCTCCATCCCCTCCACCTCTTCGGCCGCAACGTTACT
ATCCCCTTCTTGTTCCTCCCCCTCGCATGCATCCATGAAGTCAAAACAAA
CACGTTCGTTGCTCTCCTCGTCCGCGGCAGTGCCACCATCATCATCATCA
TCATCATCGGCAGCGGCATCAGCAGTTGCCACCTCGCATCAGGCGATGGG
GAGCATCGCAAAAAGCATAGAATTAGTCTAATGCATAAAATTAGAACGAA
TAGAATGAGAATCTTGTCCAAATTTGCAAAAGTCGCTCCATCCATCTCTC
TTCCCTCTCCTTGCTTGTGTATATGGTTTAGAGCGAGTGAGAGAGTGAGG
GGTTGCTTATCTGCCTTTCCAAAGAAATGGATGGGGGCCCGGGGAAATCA
TTGCTCGAAATAAATGGAGGGATCGAAGTAGAAGAAGCGGCAGCTGTTTT
TATCCCTCCTATGTGCTCTGCGTCGCATGCCCGTCCAGCTTAAGCTTACC
GACCGAAAAACAATAAAAGTCACTCAATCAAAGCAAAGAACAAAGTCCAA
GAAACAAACTGCAATGTGGAGACTTCACTAGATTCTTGAGGGTCTTTTCT
CTGGCGTGTATCTCCACTATTTTACTTGTTCAACCAGTCTTTTGAATAGT
CCTAGAGTGTTTGTGGTCACACATTCCTTGTAGTATTTATTTTATATACA
CTTCCCTACACCAATAGGTATTTTCCCAACACAAGCATCATCATCATCAT
CAGCAGCAGCAGCAGCAGCAGCACACAGCAGCAGCAGCACACAGCAGCAC
TCAGCAGTAGCAGTATTGGGACCCTAATCCCTAGAGTCACCATCAACACC
ACCATCAGCAGCAGCAGCAAGCTGTTCGATCTTCAGCCCGATCCTCCTCC
TCGCTTCATCAATCGCATCCGGGGTCACACGCGCCGCCAATCTCGTCGTA
TTAAGCTTCGGAGACCGTTCCCTCCCTTCTTCACTCCCACCCTCCGTCAC
ATAAAGATGCGCCAAATACTTCGTCATGATCAAGACATACATCCCGCAGT
CATACCCGTTCACCTGCTGTGGACATCCCCGCACAGCTTCCACCTTCCCT
CCCTCCTTCCCTCCCTCCTTCCCTGCCACCATGCGCCAAAACTGAGCAGC
TGTCCTTTTGGCGGCTGGTTCATTCCTACCACCGCTCGAGTCGAGGTGGA
AGAATTTCCCGGGCTGAGCGCTGCTGCCGTTGCCAGCGCTGTAGACGAGA
AGGCTCCTGATAGTGGATGTGTGTAATAGGTTCTGTGAGTGTCGTGGAGG
AATGAAAGAGACCCTGTGAGAAACGGACGGGGTAGGAAAAGAAGCAAAGT
TGTCACACGCATGCAGACCTCCGAGGAGAACGGTGACATGCTAACATACA
TACCAGTGCGTGCAATCACTCCTGAAATCCTCGGCGTCGTTGACGGGGAT
GAAGACCATGCTTCGTCTATCCAGCTTCAAGCCCTCCCCCACTTCCTCCA
ACTCGCCTTGGTCTACGATACAATTTTAAGTAATGGATTCCCAAATAAGT
TTCCATAAAACAATGGATGTCACGGAGGTTACAAATTCATATGAGAGCTC
CTACCAAGAGCCGTCACTTTTTGCTCTTCAAATTTTTGCAGATCTGTCCC
TGCACCGCCCGTCCTCCCTCCCTTCTTCATTCTATTCGGCCCCTCCCCCC
back to topCoding sequence (CDS) from alignment at chr2:747237..750686+ >NO02G02730.1 ID=NO02G02730.1|Name=NO02G02730.1|organism=Nannochloropsis oceanica|type=CDS|length=1572bp|location=Sequence derived from alignment at chr2:747237..750686+ (Nannochloropsis oceanica) ATGCGGGCAAGGCTCACCCAGGCCACGGGCGCAGCAAGCTCTCAAACATC GTCGTTAGGGGGAGTGGAAGACCTAGACCATGACGACCATGTTGTACTCT CGGTGCTGGACGACGGTGTGGGCCACAACTCCGAGTTGTTGCGGAGAAGC GAGTCGAATGCCGCGAGTGTAGTACCTAAGCAGCGCTCGAGTCTGAGTTT CCTCAGTTTAGGCGGGAGTAGCAGCAAGGCCCGGAAGCACATAGAATTGG GAAACCCGCATGGCGCGGGCATTGCGCTCGGAGGTATGGCTGATGATGCA GCTCTCTCGGCAGCTACGGCAGCGGGAGGTAAGGAGAGTTGGAGAGATCG AGAGGCGGGCAGCGACGTTCACCATGGGCATGAACGGCCATCTTTCCGGG TGATCGGTGTGCAGATCTCACACATGTCACGGACGGGGCAGTTTCTGTTC TGTACTTTTGGGGTCTTTTCTTTTTTGTTGGTATACGGGTTCCTTCAGGA GTATATGGTTATTCACGTCTTCCAGCGGCAGTTGGGCATCTTCTTGACTT TGTGTCAATTTGCGGGTTACTCGTCATTGGCGGCTTTGCATCGGCTCATT CATGCGGATACGCCACGGAGAATCCCGTTGGGGTACTACGTCTTGCTGGC GACGCTGCAAGCGACGATGCAGGGGTTGACGAATTTGTCAATGCGGTGGT TGAACTACCCGGCGAAGATGTTGTTCAAGTCTTCGAGGGTGATTCCGACA ATGATCGTGGGGGTTTTCATCATGAAGAAGCGGTACAAGATGAAAGACTA CATGGTCGTCGCCCTTCTATCCCTGGGCCTCGTCTTCTTCATCCAAGCCG ACGTGAAAGTATCCCCCTCCTTTCATCCTCTGGGGATAATTTTCATCTCC ATGGCTCTAGTCGTCGATGCGGCCATAGTGAACATCCAGGAATACACCTT GAGGAGATACGACGCTAGCCATGACGAACTCATCTTCTACTCCTACGGCA TTGGATCGTTCATCCTTTTTGCCTACTGCCTCTTCTCCATGGAGCTTTAC GATGGCATCGTATTTCTCCGCTCCCAGCCCCCTCGCAGCACCCTCTGTCT CATCATTTTCTGTTTCTGCGGCTACTTCGGTGTCACCTGCGTGGCGGCCC TGACCAAGAAATTCGGTGCTCTTGCCTCGACTATGACGACAACCGCACGG AAAGCCTTGACACTCTTTCTTTCCTTCTTCATCTTTCCGAAACCTGCCAC GGGGATGCATGTTTTTGGGGGGGTCCTTTTCGTGTTGGGGCTGTCCGTTA AAGCTGTGCCCACAGGCCGGAACAAGGATTATGCTTCCTCTTCCTCCGCC TCCTCCTCCATCCCCTCCACCTCTTCGGCCGCAACGTTACTATCCCCTTC TTGTTCCTCCCCCTCGCATGCATCCATGAAGTCAAAACAAACACGTTCGT TGCTCTCCTCGTCCGCGGCAGTGCCACCATCATCATCATCATCATCATCG GCAGCGGCATCAGCAGTTGCCACCTCGCATCAGGCGATGGGGAGCATCGC AAAAAGCATAGAATTAGTCTAA back to top
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