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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr2 | genome | chr2:552468..555793 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO02G01930.2 vs.
Match: EWM30451.1 (phosphate phosphoenolpyruvate translocator precursor [Nannochloropsis gaditana]) HSP 1 Score: 629.0 bits (1621), Expect = 1.000e-176 Identity = 339/410 (82.68%), Postives = 366/410 (89.27%), Query Frame = 0
Query: 1 MRLLVLGLVSLGVTGFAHTHPRLL-KTPGAGIKARTCFAEPPSASSTTSRALALCPRNAASLPTAAPVEAAVIYNLQPTPIVSPRFLISTRGGASTAAKPATS----TLKVGSFFFLWYLFNIGYNIYNKKALNVLPLPWTVGLIQLSLGLLYVFPLWALGIRKAPKLTVQNVKNLLPVALMHAMAHISAVISLGAGAVSFTHIIKAAEPAFTSLFSALFLKQFFAPVVYASLIPVMGGVAIASLTERKFSWLAFNSAMLANTASAGRGIFAKKTMKEPQGQNMDAANLYAVLTILATLIMAPAAVLVEGSKVRGAWQAALAVTSQKQLINYIISSGLYFYLYNEVAFLALDSVHPVTHAVGNTIKRVVIIGASILVFKNPVTMQGYIGSAVAIAGVLLYSLAVEKTKKR 406
MRLLVLGLVSLGVTGFAHTHPRLL K PGA +K R CFAEPPS TSR+ +L A+L + P +YNLQPTP+V+P+ L+S RGG A + + TLKVGSFFFLWYLFNIGYNIYNKKALNVLPLPW VGL+QLSLGLLYVFPLW GIRKAPKL++QNVKN+LPVA MHAMAHI+AVISLGAGAVSFTHIIKAAEPAFTSLFSALFLKQ+F+PVVYASLIPVMGGVAIASLTERKFSWLAFNSAMLANTASAGRGIFAKKTM+EPQGQNMD ANLYAVLTILATLIMAP A LVEGSK++ AW+AALAVTSQ+QLINYI+SSGLYFYLYNEVAFLALDSVHPVTHAVGNTIKRVVIIGASILVFKNPVT+QGYIGSAVAIAGVLLYSLAVE+TKKR
Sbjct: 1 MRLLVLGLVSLGVTGFAHTHPRLLSKIPGASLKGRPCFAEPPSGP--TSRSFSLPQSRTAALTSVEPS----VYNLQPTPVVAPKLLVSRRGGEVATATGSDAGVKQTLKVGSFFFLWYLFNIGYNIYNKKALNVLPLPWMVGLVQLSLGLLYVFPLWLFGIRKAPKLSLQNVKNILPVAAMHAMAHITAVISLGAGAVSFTHIIKAAEPAFTSLFSALFLKQYFSPVVYASLIPVMGGVAIASLTERKFSWLAFNSAMLANTASAGRGIFAKKTMREPQGQNMDPANLYAVLTILATLIMAPVAFLVEGSKLKPAWEAALAVTSQRQLINYIVSSGLYFYLYNEVAFLALDSVHPVTHAVGNTIKRVVIIGASILVFKNPVTLQGYIGSAVAIAGVLLYSLAVERTKKR 404
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO02G01930.2 ID=NO02G01930.2|Name=NO02G01930.2|organism=Nannochloropsis oceanica|type=mRNA|length=2767bp
GGCCGCAAAGAAGTCCCTCGCTGTGGTGCATTTCGATAAATTTGCACGTG
GGATGGTGGATGAGTGCAACGCGAGTGAGTGGGTTGTGAAAGCTTCTACG
CATGATGCGTGTCCTCTCTTCCTCTCTCCTCCCGCGAGGCACCTTCCCCC
GCTCTATAACAATCACTGCAACCCGCGGCATCACAGCAACAAAAGCTTGA
GGGTCGATGGGAGGCTTGGGGTGGCTGCCATGTAGGTAGGTGGTTGTGGG
AGGAGCAGCACCATCACACATCAGAGAGAAGCTTGCCCTCCTCCCTCCTC
TTAAAAGTGATAGAAATAGAACAACATACAGCCTTTGCTCACAGGGAGGG
AAAAAAAAGCACGTGCAGGCCATCTTCGGATACAAGTGCTCGCATACACT
TTACAAACTTCCGCATTTTGACCCTTTTCTTTCATCCCCCTTAGTTGCGG
CCGTTCAAATCGGCGCTCCTTCTGTCATGCTTCTCCTCCGGGCCACCGAG
CCGTAAGTTGTTACGAAAAACGCGAGCCGATCTCGTATCTTTGTTTTATT
CGCCTGAGATGCTCCGTAGGTTGGGAGGCGAGGAAGGGAAGCGAACGCTG
ACTGTAGGCCCAAGTGCTCTGCTCCCACCCCATCATCAGAACTGGTTGAC
GTACCCGGCCAAACAGCAACTTGGAGGTCCGGCCACCCCCCGCCACCTAA
GAGAACGCTTGCGGCTGTCATCTTTTCCCCCCTCTTTCCCACCACCACCA
CCACCATCACCACACACACACGATGAGACTACTAGTACTCGGCCTCGTCT
CTTTGGGCGTCACGGGCTTCGCCCACACCCACCCTCGCCTTCTCAAGACA
CCTGGCGCTGGCATCAAAGCCCGCACTTGCTTCGCCGAACCCCCCTCCGC
TTCCTCCACCACCTCACGTGCTTTAGCACTCTGCCCCCGGAACGCTGCTA
GCCTCCCGACCGCTGCCCCGGTCGAGGCCGCCGTCATCTACAATCTGCAG
CCTACCCCCATCGTTTCTCCCCGCTTTCTGATTTCTACTCGTGGCGGTGC
CTCCACAGCAGCCAAGCCCGCCACCTCCACGCTTAAAGTTGGCTCTTTTT
TTTTCTTATGGTATTTGTTCAATATTGGCTACAACATCTACAACAAGAAG
GCCCTGAATGTGCTTCCCCTCCCCTGGACCGTTGGCCTCATTCAGCTTTC
CCTCGGCCTGCTGTATGTCTTTCCCTTGTGGGCACTCGGCATCCGCAAAG
CCCCTAAGCTGACGGTACAGAATGTGAAGAACCTCTTGCCCGTCGCCTTA
ATGCACGCCATGGCCCACATCAGTGCGGTCATTTCTCTTGGGGCCGGCGC
CGTCTCCTTCACCCATATAATTAAAGCTGCTGAGCCCGCGTTCACCTCCT
TGTTTTCCGCCTTGTTTCTCAAGCAATTCTTCGCACCTGTCGTGTATGCG
TCTTTGATCCCTGTGATGGGTGGGGTGGCGATTGCCTCTTTAACTGAGAG
GAAATTCAGTTGGCTGGCGTTCAACTCTGCGATGCTTGCAAATACAGCCT
CGGCTGGACGAGGGATTTTTGCCAAGAAGACCATGAAGGAGCCACAGGGC
CAGAACATGGATGCGGCGAATCTATATGCCGTCCTCACGATCCTGGCGAC
GTTGATTATGGCGCCTGCGGCGGTGTTGGTGGAGGGGAGTAAGGTGAGGG
GGGCGTGGCAGGCGGCCTTGGCAGTGACAAGCCAGAAGCAGTTGATCAAT
TATATCATCTCGAGTGGGTTATACTTTTACTTGTACAATGAAGTGGCGTT
CTTGGCCTTAGATAGCGTGCACCCTGTGACGCACGCGGTCGGGAACACGA
TCAAGCGTGTCGTGATTATAGGCGCGTCAATTCTGGTGTTTAAGAATCCG
GTGACCATGCAGGGGTATATTGGTTCTGCGGTTGCTATTGCTGGTGTGCT
TCTCTACTCCTTAGCTGTGGAAAAGACCAAGAAGCGGGCGTGAGGCAAGT
AAAGCACGAGTATTCAAAATCAGTTGAACAACTATGCGAATTAATCCCCT
CTTTATTCCTCTTCCTCCTCCATTTTCTTCTCTCCCTCCCTCAGTCGAAG
GGAGAACAGCAAAAGACAGATAGTCACATCTTCCTTTTCCCATCTCCCCC
GCGGGCAAAGCAAAAGACAGAAGGTTGCCCCCGTTCTTTGAGAGAGGTGA
TCACGTGAGACATTGTTTTGTTTCATTTTTCCTCCACCTTCTCTCTCGTT
TGTTCGAGAATTTCGGTGTGGCATATATGTTTGTGCGTGGTGTGAATGTT
GTACCGTGATAACGACGACGACAACGTCTGTGTGAGTCTTTGCGAGTCTG
TGTCTCTCTCTCTTTGTCCTAGATATGCGTGTAATTTCATGTGTACGTGT
GTGCGTCATTTATTTCGCACGTATAGGTCATATATGTGCGATCATGCATG
CGCGCGCGCGCGTGTGCCATGCATGATCTTGCTTGGTCTTATTTTGCCCG
GTGAGATGGAATATAACAAAAGGGTGGTGTCATGTGTGTTTTGGCGCCAT
TATCAAGCCAAAATAAAAAAGCAACTGCAGCAGCAGTAGCAGCAGCAATA
GGAACAGCATGAAGGGGTGAGATGGAAGAAAGGCCGGGTGTGGAGGAGTG
GGTAACGATGGTACGAAGCGAAAGGCCTTAGATAAGAGAATGAGAGCCAA
GACGCCAAGCACAATAAAAAGGAAAAGGACGACGAAAATCAAAAGCAGCT
TGAAAAGGCTTTACATA back to topprotein sequence of NO02G01930.2 >NO02G01930.2-protein ID=NO02G01930.2-protein|Name=NO02G01930.2|organism=Nannochloropsis oceanica|type=polypeptide|length=407bp
MRLLVLGLVSLGVTGFAHTHPRLLKTPGAGIKARTCFAEPPSASSTTSRA
LALCPRNAASLPTAAPVEAAVIYNLQPTPIVSPRFLISTRGGASTAAKPA
TSTLKVGSFFFLWYLFNIGYNIYNKKALNVLPLPWTVGLIQLSLGLLYVF
PLWALGIRKAPKLTVQNVKNLLPVALMHAMAHISAVISLGAGAVSFTHII
KAAEPAFTSLFSALFLKQFFAPVVYASLIPVMGGVAIASLTERKFSWLAF
NSAMLANTASAGRGIFAKKTMKEPQGQNMDAANLYAVLTILATLIMAPAA
VLVEGSKVRGAWQAALAVTSQKQLINYIISSGLYFYLYNEVAFLALDSVH
PVTHAVGNTIKRVVIIGASILVFKNPVTMQGYIGSAVAIAGVLLYSLAVE
KTKKRA* back to topmRNA from alignment at chr2:552468..555793- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO02G01930.2 ID=NO02G01930.2|Name=NO02G01930.2|organism=Nannochloropsis oceanica|type=mRNA|length=3326bp|location=Sequence derived from alignment at chr2:552468..555793- (Nannochloropsis oceanica)
GGCCGCAAAGAAGTCCCTCGCTGTGGTGCATTTCGATAAATTTGCACGTG
GGATGGTGGATGAGTGCAACGCGAGTGAGTGGGTTGTGAAAGCTTCTACG
CATGATGCGTGTCCTCTCTTCCTCTCTCCTCCCGCGAGGCACCTTCCCCC
GCTCTATAACAATCACTGCAACCCGCGGCATCACAGCAACAAAAGCTTGA
GGGTCGATGGGAGGCTTGGGGTGGCTGCCATGTAGGTAGGTGGTTGTGGG
AGGAGCAGCACCATCACACATCAGAGAGAAGCTTGCCCTCCTCCCTCCTC
TTAAAAGTGATAGAAATAGAACAACATACAGCCTTTGCTCACAGGGAGGG
AAAAAAAAGCACGTGCAGGCCATCTTCGGATACAAGTGCTCGCATACACT
TTACAAACTTCCGCATTTTGACCCTTTTCTTTCATCCCCCTTAGTTGCGG
CCGTTCAAATCGGCGCTCCTTCTGTCATGCTTCTCCTCCGGGCCACCGAG
CCGTAAGTTGTTACGAAAAACGCGAGCCGATCTCGTATCTTTGTTTTATT
CGCCTGAGATGCTCCGTAGGTTGGGAGGCGAGGAAGGGAAGCGAACGCTG
ACTGTAGGCCCAAGTGCTCTGCTCCCACCCCATCATCAGAACTGGTAATT
GCACGTGTCTATGGATTTGACTCCTGGCTTGAAACCCCGCCCTCTCCTCA
CGCACGCACTCACTCCAAACCCCTGCGTTCCCCTCCGCCCACACCACCCA
CAGGTTGACGTACCCGGCCAAACAGCAACTTGGAGGTCCGGCCACCCCCC
GCCACCTAAGAGAACGCTTGCGGCTGTCATCTTTTCCCCCCTCTTTCCCA
CCACCACCACCACCATCACCACACACACACGATGAGACTACTAGTACTCG
GCCTCGTCTCTTTGGGCGTCACGGGCTTCGCCCACACCCACCCTCGCCTT
CTCAAGACACCTGGCGCTGGCATCAAAGGTGAGGAATTCATTGACCCTCC
CTATGCTCTTTATTCGGCAACCGTAATGCTGCGGAGTTGTTGGCATCCCC
TCGATACATTTTGCTATACGTCCCTCTTCTAATGCGGTAGTTGTCAAACC
ACCTCTGCCACTGCAATGCTTCTGCTTGCCTTCCCTCCGATCCTTTGCCT
TGTGCGACGTCTCGGTCAATTTTTATCCAAACAACCCCGCAGTGTTGCCC
ATGCACCCTTTGGAGGCGAAAGTCCATCATCCCAATACTTCCATGTTAAA
TTTCATCGTCGAGTTCGTTCGTCTTTCATTTCACACCTGGTACAGTCACA
CTCACTCGTGTCTCTTTCACTGCTCTGGCGTACACTCTCCTTCTGGCCTA
GCCCTCCCAGCGCTTTCTATTGATATCGCAACTCTCTTATCCTCTCTCCT
TCCCTTCCTACCCTTTCTATCAACACAGCCCGCACTTGCTTCGCCGAACC
CCCCTCCGCTTCCTCCACCACCTCACGTGCTTTAGCACTCTGCCCCCGGA
ACGCTGCTAGCCTCCCGACCGCTGCCCCGGTCGAGGCCGCCGTCATCTAC
AATCTGCAGCCTACCCCCATCGTTTCTCCCCGCTTTCTGATTTCTACTCG
TGGCGGTGCCTCCACAGCAGCCAAGCCCGCCACCTCCACGCTTAAAGTTG
GCTCTTTTTTTTTCTTATGGTATTTGTTCAATATTGGCTACAACATCTAC
AACAAGAAGGCCCTGAATGTGCTTCCCCTCCCCTGGACCGTTGGCCTCAT
TCAGCTTTCCCTCGGCCTGCTGTATGTCTTTCCCTTGTGGGCACTCGGCA
TCCGCAAAGCCCCTAAGCTGACGGTACAGAATGTGAAGAACCTCTTGCCC
GTCGCCTTAATGCACGCCATGGCCCACATCAGTGCGGTCATTTCTCTTGG
GGCCGGCGCCGTCTCCTTCACCCATATAATTAAAGCTGCTGAGCCCGCGT
TCACCTCCTTGTTTTCCGCCTTGTTTCTCAAGCAATTCTTCGCACCTGTC
GTGTATGCGTCTTTGATCCCTGTGATGGGTGGGGTGGCGATTGCCTCTTT
AACTGAGAGGAAATTCAGTTGGCTGGCGTTCAACTCTGCGATGCTTGCAA
ATACAGCCTCGGCTGGACGAGGGATTTTTGCCAAGAAGACCATGAAGGAG
CCACAGGGCCAGAACATGGATGCGGCGAATCTATATGCCGTCCTCACGAT
CCTGGCGACGTTGATTATGGCGCCTGCGGCGGTGTTGGTGGAGGGGAGTA
AGGTGAGGGGGGCGTGGCAGGCGGCCTTGGCAGTGACAAGCCAGAAGCAG
TTGATCAATTATATCATCTCGAGTGGGTTATACTTTTACTTGTACAATGA
AGTGGCGTTCTTGGCCTTAGATAGCGTGCACCCTGTGACGCACGCGGTCG
GGAACACGATCAAGCGTGTCGTGATTATAGGCGCGTCAATTCTGGTGTTT
AAGAATCCGGTGACCATGCAGGGGTATATTGGTTCTGCGGTTGCTATTGC
TGGTGTGCTTCTCTACTCCTTAGCTGTGGAAAAGACCAAGAAGCGGGCGT
GAGGCAAGTAAAGCACGAGTATTCAAAATCAGTTGAACAACTATGCGAAT
TAATCCCCTCTTTATTCCTCTTCCTCCTCCATTTTCTTCTCTCCCTCCCT
CAGTCGAAGGGAGAACAGCAAAAGACAGATAGTCACATCTTCCTTTTCCC
ATCTCCCCCGCGGGCAAAGCAAAAGACAGAAGGTTGCCCCCGTTCTTTGA
GAGAGGTGATCACGTGAGACATTGTTTTGTTTCATTTTTCCTCCACCTTC
TCTCTCGTTTGTTCGAGAATTTCGGTGTGGCATATATGTTTGTGCGTGGT
GTGAATGTTGTACCGTGATAACGACGACGACAACGTCTGTGTGAGTCTTT
GCGAGTCTGTGTCTCTCTCTCTTTGTCCTAGATATGCGTGTAATTTCATG
TGTACGTGTGTGCGTCATTTATTTCGCACGTATAGGTCATATATGTGCGA
TCATGCATGCGCGCGCGCGCGTGTGCCATGCATGATCTTGCTTGGTCTTA
TTTTGCCCGGTGAGATGGAATATAACAAAAGGGTGGTGTCATGTGTGTTT
TGGCGCCATTATCAAGCCAAAATAAAAAAGCAACTGCAGCAGCAGTAGCA
GCAGCAATAGGAACAGCATGAAGGGGTGAGATGGAAGAAAGGCCGGGTGT
GGAGGAGTGGGTAACGATGGTACGAAGCGAAAGGCCTTAGATAAGAGAAT
GAGAGCCAAGACGCCAAGCACAATAAAAAGGAAAAGGACGACGAAAATCA
AAAGCAGCTTGAAAAGGCTTTACATA back to topCoding sequence (CDS) from alignment at chr2:552468..555793- >NO02G01930.2 ID=NO02G01930.2|Name=NO02G01930.2|organism=Nannochloropsis oceanica|type=CDS|length=1221bp|location=Sequence derived from alignment at chr2:552468..555793- (Nannochloropsis oceanica)
ATGAGACTACTAGTACTCGGCCTCGTCTCTTTGGGCGTCACGGGCTTCGC
CCACACCCACCCTCGCCTTCTCAAGACACCTGGCGCTGGCATCAAAGCCC
GCACTTGCTTCGCCGAACCCCCCTCCGCTTCCTCCACCACCTCACGTGCT
TTAGCACTCTGCCCCCGGAACGCTGCTAGCCTCCCGACCGCTGCCCCGGT
CGAGGCCGCCGTCATCTACAATCTGCAGCCTACCCCCATCGTTTCTCCCC
GCTTTCTGATTTCTACTCGTGGCGGTGCCTCCACAGCAGCCAAGCCCGCC
ACCTCCACGCTTAAAGTTGGCTCTTTTTTTTTCTTATGGTATTTGTTCAA
TATTGGCTACAACATCTACAACAAGAAGGCCCTGAATGTGCTTCCCCTCC
CCTGGACCGTTGGCCTCATTCAGCTTTCCCTCGGCCTGCTGTATGTCTTT
CCCTTGTGGGCACTCGGCATCCGCAAAGCCCCTAAGCTGACGGTACAGAA
TGTGAAGAACCTCTTGCCCGTCGCCTTAATGCACGCCATGGCCCACATCA
GTGCGGTCATTTCTCTTGGGGCCGGCGCCGTCTCCTTCACCCATATAATT
AAAGCTGCTGAGCCCGCGTTCACCTCCTTGTTTTCCGCCTTGTTTCTCAA
GCAATTCTTCGCACCTGTCGTGTATGCGTCTTTGATCCCTGTGATGGGTG
GGGTGGCGATTGCCTCTTTAACTGAGAGGAAATTCAGTTGGCTGGCGTTC
AACTCTGCGATGCTTGCAAATACAGCCTCGGCTGGACGAGGGATTTTTGC
CAAGAAGACCATGAAGGAGCCACAGGGCCAGAACATGGATGCGGCGAATC
TATATGCCGTCCTCACGATCCTGGCGACGTTGATTATGGCGCCTGCGGCG
GTGTTGGTGGAGGGGAGTAAGGTGAGGGGGGCGTGGCAGGCGGCCTTGGC
AGTGACAAGCCAGAAGCAGTTGATCAATTATATCATCTCGAGTGGGTTAT
ACTTTTACTTGTACAATGAAGTGGCGTTCTTGGCCTTAGATAGCGTGCAC
CCTGTGACGCACGCGGTCGGGAACACGATCAAGCGTGTCGTGATTATAGG
CGCGTCAATTCTGGTGTTTAAGAATCCGGTGACCATGCAGGGGTATATTG
GTTCTGCGGTTGCTATTGCTGGTGTGCTTCTCTACTCCTTAGCTGTGGAA
AAGACCAAGAAGCGGGCGTGA back to top
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