NO02G01410.1, NO02G01410.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G01410.1
Unique NameNO02G01410.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1029
Alignment locationchr2:419868..420896 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:419868..420896 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO02G01410.1 vs.
Match: EWM30506.1 (triacylglycerol lipase [Nannochloropsis gaditana])

HSP 1 Score: 521.2 bits (1341), Expect = 2.500e-144
Identity = 254/337 (75.37%), Postives = 284/337 (84.27%), Query Frame = 0 
Query:    1 MVAKAGTARVHNTVKRFAEEMLDEGVLDDVMAHLETNPNSRLVVTGYSLGGMLSQIFCLRLGEALLQRGLSTRHVLMMGFGSPRVGDEGFMARLRLLYPKQSALMNVVYPLDTLHAFPPAGEGYVDAVVKVFLRQPGQFVGRRAPSRARTPFATPLTWLRVFDSKVDEIASKHRNQERERAASESAHCGNSVRTGTKEDECGFCGSDAHTTLRHRCRICTERGSHRSADCPNKDRGCKLCGLPDHATGQHLCSVCKLHGHRGRYCHELASVGWAELAAFALFHDASYYSFATAAEDPATVQRMAEVPLTPPRASRPHNGGGKVFGVTFKEEDMEQLE 338
            +V KAGT RVH TVKRFAE+ML EG+LDDV+  LE  P+ RLV+TGYSLGGMLSQ+FCL LGEAL+QRG+ST+ VLMMGFGSPRVGD+GF ARL LLYP+QSALMN VYPLDTLHAFPPA EGY DAVVKVFLRQPGQFVGRR PSR+ TPFATPL+WLRVFD+KVDEIASKHR + R R A+     G+       EDEC  C S+AHTTLRHRCRICTERGSHRSADCPN+ +GCKLCGLPDH TGQHLCSVCKL GHRGRYCHEL SVGWAELAAFALFHDASYYS ATAAEDP +++RMA +P TPPR  R + G  K  GVTF+E+D++QLE
Sbjct:  151 LVGKAGTVRVHATVKRFAEDMLSEGLLDDVLQCLEAAPDCRLVITGYSLGGMLSQLFCLYLGEALVQRGMSTQQVLMMGFGSPRVGDDGFKARLGLLYPQQSALMNAVYPLDTLHAFPPASEGYADAVVKVFLRQPGQFVGRRTPSRS-TPFATPLSWLRVFDTKVDEIASKHRQEVRARGATGETLVGSR----GSEDECVLCASNAHTTLRHRCRICTERGSHRSADCPNRGKGCKLCGLPDHPTGQHLCSVCKLPGHRGRYCHELQSVGWAELAAFALFHDASYYSLATAAEDPVSLRRMAPLPTTPPRPPRSYAGATKALGVTFREDDLKQLE 482
The following BLAST results are available for this feature:
BLAST of NO02G01410.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM30506.12.500e-14475.37triacylglycerol lipase [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G01410NO02G01410Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G01410.1NO02G01410.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G01410.1.cds1NO02G01410.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G01410.1 ID=NO02G01410.1|Name=NO02G01410.1|organism=Nannochloropsis oceanica|type=mRNA|length=1029bp
ATGGTAGCCAAGGCCGGGACTGCCAGAGTCCACAACACCGTCAAGCGCTT
TGCGGAAGAGATGCTGGACGAAGGAGTACTGGACGATGTGATGGCCCACC
TGGAGACGAACCCCAACAGTCGTCTAGTCGTCACTGGATATTCTCTTGGG
GGAATGCTGTCGCAGATCTTTTGCTTGCGCCTGGGCGAGGCGTTGCTGCA
GCGCGGGCTGTCGACGCGGCATGTGCTGATGATGGGCTTCGGGAGCCCTC
GTGTCGGCGACGAAGGATTCATGGCCCGGCTGCGGTTACTCTACCCGAAG
CAAAGCGCGTTGATGAATGTTGTCTACCCTTTGGATACACTCCATGCCTT
TCCTCCAGCTGGGGAGGGCTACGTGGATGCCGTCGTCAAGGTTTTCTTGA
GGCAGCCTGGGCAGTTTGTCGGCCGGCGTGCCCCGTCGCGCGCCCGTACT
CCCTTTGCCACGCCTTTGACATGGCTCCGTGTGTTCGATAGCAAGGTGGA
CGAGATTGCGTCGAAGCACCGCAATCAGGAAAGGGAGCGGGCAGCAAGTG
AGTCTGCTCACTGTGGTAACAGTGTTCGCACTGGCACCAAGGAAGATGAA
TGCGGGTTTTGTGGCTCGGACGCGCACACAACCCTCCGCCACCGCTGTCG
AATATGCACGGAACGTGGCAGTCATCGCTCAGCCGACTGTCCTAACAAGG
ACCGAGGTTGTAAATTATGTGGCCTTCCTGATCACGCGACCGGGCAACAT
CTCTGTAGTGTTTGCAAGCTCCACGGGCATCGAGGTAGGTACTGCCACGA
GTTGGCCAGTGTGGGATGGGCAGAGCTAGCAGCATTTGCGCTCTTCCATG
ATGCGTCGTATTATTCTTTTGCGACCGCGGCCGAGGACCCTGCGACGGTG
CAGCGCATGGCTGAAGTTCCTCTTACCCCTCCTCGGGCGTCACGGCCGCA
TAATGGGGGGGGCAAGGTGTTTGGGGTGACATTTAAGGAGGAGGACATGG
AACAGCTTGAGGCTGTCAATTATTTGTAA
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protein sequence of NO02G01410.1

>NO02G01410.1-protein ID=NO02G01410.1-protein|Name=NO02G01410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=343bp
MVAKAGTARVHNTVKRFAEEMLDEGVLDDVMAHLETNPNSRLVVTGYSLG
GMLSQIFCLRLGEALLQRGLSTRHVLMMGFGSPRVGDEGFMARLRLLYPK
QSALMNVVYPLDTLHAFPPAGEGYVDAVVKVFLRQPGQFVGRRAPSRART
PFATPLTWLRVFDSKVDEIASKHRNQERERAASESAHCGNSVRTGTKEDE
CGFCGSDAHTTLRHRCRICTERGSHRSADCPNKDRGCKLCGLPDHATGQH
LCSVCKLHGHRGRYCHELASVGWAELAAFALFHDASYYSFATAAEDPATV
QRMAEVPLTPPRASRPHNGGGKVFGVTFKEEDMEQLEAVNYL*
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mRNA from alignment at chr2:419868..420896+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G01410.1 ID=NO02G01410.1|Name=NO02G01410.1|organism=Nannochloropsis oceanica|type=mRNA|length=1029bp|location=Sequence derived from alignment at chr2:419868..420896+ (Nannochloropsis oceanica)
ATGGTAGCCAAGGCCGGGACTGCCAGAGTCCACAACACCGTCAAGCGCTT
TGCGGAAGAGATGCTGGACGAAGGAGTACTGGACGATGTGATGGCCCACC
TGGAGACGAACCCCAACAGTCGTCTAGTCGTCACTGGATATTCTCTTGGG
GGAATGCTGTCGCAGATCTTTTGCTTGCGCCTGGGCGAGGCGTTGCTGCA
GCGCGGGCTGTCGACGCGGCATGTGCTGATGATGGGCTTCGGGAGCCCTC
GTGTCGGCGACGAAGGATTCATGGCCCGGCTGCGGTTACTCTACCCGAAG
CAAAGCGCGTTGATGAATGTTGTCTACCCTTTGGATACACTCCATGCCTT
TCCTCCAGCTGGGGAGGGCTACGTGGATGCCGTCGTCAAGGTTTTCTTGA
GGCAGCCTGGGCAGTTTGTCGGCCGGCGTGCCCCGTCGCGCGCCCGTACT
CCCTTTGCCACGCCTTTGACATGGCTCCGTGTGTTCGATAGCAAGGTGGA
CGAGATTGCGTCGAAGCACCGCAATCAGGAAAGGGAGCGGGCAGCAAGTG
AGTCTGCTCACTGTGGTAACAGTGTTCGCACTGGCACCAAGGAAGATGAA
TGCGGGTTTTGTGGCTCGGACGCGCACACAACCCTCCGCCACCGCTGTCG
AATATGCACGGAACGTGGCAGTCATCGCTCAGCCGACTGTCCTAACAAGG
ACCGAGGTTGTAAATTATGTGGCCTTCCTGATCACGCGACCGGGCAACAT
CTCTGTAGTGTTTGCAAGCTCCACGGGCATCGAGGTAGGTACTGCCACGA
GTTGGCCAGTGTGGGATGGGCAGAGCTAGCAGCATTTGCGCTCTTCCATG
ATGCGTCGTATTATTCTTTTGCGACCGCGGCCGAGGACCCTGCGACGGTG
CAGCGCATGGCTGAAGTTCCTCTTACCCCTCCTCGGGCGTCACGGCCGCA
TAATGGGGGGGGCAAGGTGTTTGGGGTGACATTTAAGGAGGAGGACATGG
AACAGCTTGAGGCTGTCAATTATTTGTAA
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Coding sequence (CDS) from alignment at chr2:419868..420896+

>NO02G01410.1 ID=NO02G01410.1|Name=NO02G01410.1|organism=Nannochloropsis oceanica|type=CDS|length=1029bp|location=Sequence derived from alignment at chr2:419868..420896+ (Nannochloropsis oceanica)
ATGGTAGCCAAGGCCGGGACTGCCAGAGTCCACAACACCGTCAAGCGCTT
TGCGGAAGAGATGCTGGACGAAGGAGTACTGGACGATGTGATGGCCCACC
TGGAGACGAACCCCAACAGTCGTCTAGTCGTCACTGGATATTCTCTTGGG
GGAATGCTGTCGCAGATCTTTTGCTTGCGCCTGGGCGAGGCGTTGCTGCA
GCGCGGGCTGTCGACGCGGCATGTGCTGATGATGGGCTTCGGGAGCCCTC
GTGTCGGCGACGAAGGATTCATGGCCCGGCTGCGGTTACTCTACCCGAAG
CAAAGCGCGTTGATGAATGTTGTCTACCCTTTGGATACACTCCATGCCTT
TCCTCCAGCTGGGGAGGGCTACGTGGATGCCGTCGTCAAGGTTTTCTTGA
GGCAGCCTGGGCAGTTTGTCGGCCGGCGTGCCCCGTCGCGCGCCCGTACT
CCCTTTGCCACGCCTTTGACATGGCTCCGTGTGTTCGATAGCAAGGTGGA
CGAGATTGCGTCGAAGCACCGCAATCAGGAAAGGGAGCGGGCAGCAAGTG
AGTCTGCTCACTGTGGTAACAGTGTTCGCACTGGCACCAAGGAAGATGAA
TGCGGGTTTTGTGGCTCGGACGCGCACACAACCCTCCGCCACCGCTGTCG
AATATGCACGGAACGTGGCAGTCATCGCTCAGCCGACTGTCCTAACAAGG
ACCGAGGTTGTAAATTATGTGGCCTTCCTGATCACGCGACCGGGCAACAT
CTCTGTAGTGTTTGCAAGCTCCACGGGCATCGAGGTAGGTACTGCCACGA
GTTGGCCAGTGTGGGATGGGCAGAGCTAGCAGCATTTGCGCTCTTCCATG
ATGCGTCGTATTATTCTTTTGCGACCGCGGCCGAGGACCCTGCGACGGTG
CAGCGCATGGCTGAAGTTCCTCTTACCCCTCCTCGGGCGTCACGGCCGCA
TAATGGGGGGGGCAAGGTGTTTGGGGTGACATTTAAGGAGGAGGACATGG
AACAGCTTGAGGCTGTCAATTATTTGTAA
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Synonyms
Publications