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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr2 | genome | chr2:53252..56977 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO02G00140.1 ID=NO02G00140.1|Name=NO02G00140.1|organism=Nannochloropsis oceanica|type=mRNA|length=2942bp CTCATATATATAGAAGACGCAGCTGAATTTGAAAATCGCCGACTCTCCGA CCTCCGCTTCGGCCTCATAACGGCTCCAAACCTGAAGGCGTAGAGGTAGG CCCGGCATGCATCCCTTTCTCTCTTCCTCCCCGCTATGGCACAGCGCATA GTTAGCTATCCTACCCGCGACGCTGCAACGCTCACGACACCACACAAGTA CAGGTGTAGCACGGAAACATGAGCCGTGTGATGAAAGATGATGCCGATTA CCAAGGGAGCATTTGATTGGCTATCCACAAGCAAGTATTTCGTTATCGGT CAAATGGCTTGATCAAAGCGAGATCTGTACGTTGTTCTTGTCTCACTCCT TCGATAAACGTGTTTTGACCCGATCTGGCACGCGGACGGCATCGACGCGT GTCGTGCTGCTGACTTCCACACTGTAGAAAGAATCCCGCCTAGTGCGCGA AGCCTCAGGCAATGTCCAAAGAATGTATTCTATGGTGCTGGGAGGCGCGA TTCAGGACGACAGTGGAATAGTAAAGCGCAATGGCTGGGGTCTGTGCGTG ATTTGCAGTAAACTTACGGCAACATAGTTGACATCACTAATAACTACTAT CCCCCCACGATCATATCGCATGTCCCATAACATAGCAGCTAGGAGGACGC AAGAGACGGTACGGGCATCATGCTGAACACTTCTGAGCTGCGGCCGCGAC GGAAATTGGGGGAGGGAGCGCACGGGGGGGGGAAGAATGTCTTTGAGATG GCACTGTCTGGGATGGACCAGATGATGATCGGGTGGATGATGGTGGCGGT CGTTTTCAGCCAGCTCGTCCTTGACGAGGTACTAAGGCGGGCAGAGGCCT CAGTCGGGACGAATGCGCGTGCATGCCTGCGAGAGGTGTATAAGGAATTG TCCACGTTGGGTCTGATCTCTTTCACGCTATTTATGGTCCAGAGCTTCGA GACTCAGGTGAACGAGGCCACGCTACTGGCGTTTGAGTACTCCCACATCT TCGTCTTCTCATTTGCCATCGTCTACGTGATTCAGTCTGCGGTTGTTATC GCCTGTATCAACCCCATCAAGCGACGCCTCATCCGCCTGCACGCGTACGG AGATGCCGTAGTCGCCGCCGTCGCTGCCACCGTCCCCCAACCCTCTCAAT ATCCTCCCACTGGTGATCGGAATAGTGATCTCTCCGTGCTAGACCGGCTA TATGCCTTAATTTGTTGTGCATTTGGCGGTGCATCGGGGGCGTCGCCGAC ACTGAGCCGCAGCAAGGAGGCCGTACGCGCCTTCGACGGGTTCCGGGCTT TTCGTCGGAAGTTTCTGAGGAAACATAGCTTGCCCGCATGTTTTCTATTC GACCACTACCTTATCGAAGTTTATGACCGCTGGGTAATATTGAAGCTGGA TATTGCTACCTGGTGCTGGGCGCTTATGTGCGTCATATTCGGTATTCACG CCCTAGTGGCGCGCTTTCCCCACTTTGCAGCCTTCTGCCTCAACCGCTGG ACATTCTTGTGCTATGGCTGGCTCCTTCTTCTCGCGGATTACACACTCTT CATCCTTGTCCATAGGGTGCACGAACGTGTCCTCAAACAGGTCCGATCAA GTAACAGCGACAGTCTCAGCGTCAGCACCACCTCTTCCACGTGTTCCATA GCCAACGGGAGCATGCGCTCGAGCTCTGCCGCGAGCGTCGATGCGGCTGG TGGTAGCGGTGGGTCAGTTGGGCAGATGGGAGAGGAGGATGTCATGGAGG AGCTGCGACAGCGGCGGGCGGCGCTGCATGCCCAGTATTTCCGTGAACAG AAAGAAAAAGATGGGGCTCATGAGATAATAGACGCCGGAATCGGAGAGAA CGGAAATGAGCATGCGGATGTGGGTGTCCTGCGGCACCCTCCCCGGCACT GGCACTGGGGCGTCGCCAACCTGCTGAATGCTGGTGGCATCACTAACAAC ACCCCTACGAACAACGTCGTTGCCGACGGGGCCCTAGGATTTACCCTGTG GGAAAGTTTTGCTTTTAACTACGGCACCGAGGCACTCAGCATAATTAGGT GCCTGTATCTGGCCGCGTGGCCATGCACATATACTGTGCCCGCTTTCGGG GAGTGGTTCTCCACCGGCTGGGCGCTCTTATACATCCTCGTTATTCCCAT CCCGGCCATCATCACCGGTACCGTCCTCATTCCGCGTATGGCCACGCGAT TCCTCCTTGTGGGATCTCTTTCCGTCCTAAATCTCGAGGCGTTCGATGCG GTCGTCGAGTACATGGAGGATGCCGAGGCCGCGCTTAAAGACATCGCGCA TCTCCTGCAACGCCTCACCAACATAAATGACACGGGAGCTAGCAGCGTGG AGCAGCTCTTCGCTTCTCTGGCCCAGCACCATCGTCACCATCGCCTTTCT CCCTCCGATCTCACCCATGCCACCAACGCACGCGTCGCCCGTGCCCTTTC CCAGACCAACCCCCCCGAAAGCAGTAGCTTCATCACATATGCCGAGCTCC GCGACTTCTTACGGCACCACGGAGTGCACCTCCCTCTTCGCCGCTTCCGC GCGCTGGTCCGCTTCATCGACTTGGACCTAGGTGGCCACGTGAATTTGGA GGATTTCAGAGCCCTACTCCGGGCCGATCACCTCTTTGAAGCCCAGAGGC CTCATCAGTGCCCGTCGTCGGCTCGTGTTGCACGACTCCTCAGCCAGGAT ACCCTGAACTATCATCCCCAAAATAGTTTGCATGGGCAGGACGCGGTGTT TGCAGACGTGGGGCAATTGCTTCGGCGAGGGAGCAGAGCCTTTTTAAGTC GAGTTACGCGGTCTATGGAACAAAGGGATAGTAGTGATCGAGCAGGGGGT GTAACTGCGGCTTCGGGGGTGTAATTTAATCGGTTGTTGTACATAATTAA TGCTATAAAGTAGAAAAATCTCGACCTTTTCAACGCGTCTAC back to topprotein sequence of NO02G00140.1 >NO02G00140.1-protein ID=NO02G00140.1-protein|Name=NO02G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=735bp MLNTSELRPRRKLGEGAHGGGKNVFEMALSGMDQMMIGWMMVAVVFSQLV LDEVLRRAEASVGTNARACLREVYKELSTLGLISFTLFMVQSFETQVNEA TLLAFEYSHIFVFSFAIVYVIQSAVVIACINPIKRRLIRLHAYGDAVVAA VAATVPQPSQYPPTGDRNSDLSVLDRLYALICCAFGGASGASPTLSRSKE AVRAFDGFRAFRRKFLRKHSLPACFLFDHYLIEVYDRWVILKLDIATWCW ALMCVIFGIHALVARFPHFAAFCLNRWTFLCYGWLLLLADYTLFILVHRV HERVLKQVRSSNSDSLSVSTTSSTCSIANGSMRSSSAASVDAAGGSGGSV GQMGEEDVMEELRQRRAALHAQYFREQKEKDGAHEIIDAGIGENGNEHAD VGVLRHPPRHWHWGVANLLNAGGITNNTPTNNVVADGALGFTLWESFAFN YGTEALSIIRCLYLAAWPCTYTVPAFGEWFSTGWALLYILVIPIPAIITG TVLIPRMATRFLLVGSLSVLNLEAFDAVVEYMEDAEAALKDIAHLLQRLT NINDTGASSVEQLFASLAQHHRHHRLSPSDLTHATNARVARALSQTNPPE SSSFITYAELRDFLRHHGVHLPLRRFRALVRFIDLDLGGHVNLEDFRALL RADHLFEAQRPHQCPSSARVARLLSQDTLNYHPQNSLHGQDAVFADVGQL LRRGSRAFLSRVTRSMEQRDSSDRAGGVTAASGV* back to topmRNA from alignment at chr2:53252..56977+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO02G00140.1 ID=NO02G00140.1|Name=NO02G00140.1|organism=Nannochloropsis oceanica|type=mRNA|length=3726bp|location=Sequence derived from alignment at chr2:53252..56977+ (Nannochloropsis oceanica) CTCATATATATAGAAGACGCAGCTGAATTTGAAAATCGCCGACTCTCCGA
CCTCCGCTTCGGCCTCATAACGGCTCCAAACCTGAAGGCGTAGAGGTAGG
CCCGGCATGCATCCCTTTCTCTCTTCCTCCCCGCTATGGCACAGCGCATA
GTTAGCTATCCTACCCGCGACGCTGCAACGCTCACGACACCACACAAGTA
CAGGTGTAGCACGGAAACATGAGCCGTGTGATGAAAGATGATGCCGATTA
CCAAGGGAGCATTTGATTGGCTATCCACAAGCAAGTATTTCGTTATCGGT
CAAATGGCTTGATCAAAGCGAGATCTGTACGTTGTTCTTGTCTCACTCCT
TCGATAAACGTGTTTTGACCCGATCTGGCACGCGGACGGCATCGACGCGT
GTCGTGCTGCTGACTTCCACACTGTAGAAAGAATCCCGCCTAGTGCGCGA
AGCCTCAGGCAATGTCCAAAGAATGTATTCTATGGTGCTGGGAGGCGCGA
TTCAGGACGACAGTGGAATAGTAAAGCGCAATGGCTGGGGTCTGTGCGTG
ATTTGCAGTAAACTTACGGCAACATAGTTGACATCACTAATAACTACTAT
CCCCCCACGATCATATCGCATGTCCCATAACATAGCAGCTAGGAGGACGC
AAGAGACGGTACGGGCATCATGCTGAACACTTCTGAGCTGCGGCCGCGAC
GGAAATTGGGGGAGGGAGCGCACGGGGGGGGGAAGAATGTCTTTGAGATG
GCACTGTCTGGGATGGACCAGATGATGATCGGGTGGATGATGGTGGCGGT
CGTTTTCAGCCAGCTCGTCCTTGACGAGGTACTAAGGCGGGCAGAGGCCT
CAGTCGGGACGAATGCGCGTGCATGCCTGCGAGAGGTGTATAAGGAATTG
TCCACGGTCAGTACAGTACTACTTATGCCTGCCCGTCCGTCTTCCTCCCA
CTTCCTCTCCCCCGCCTTTGCTTCCTCCCCTTTCCTCCTCATCCAAGCCC
TTCCTCCACACTCTATCTTCACTACTTTTGCCAATCTCCTACGCCATATG
ATGATGCACCATGCCAGGAATGCCACGGAAGTTGTCGAGGCCGGATAAGG
GTCAGCGCGCCACGACAATAGCCCCTTCCATCCATTCGTGGATTTCTCTC
TCAATCACTTACTAAACTCCTCTCTCCCGCCCTCTCTGCCTACCCCTCCC
CCTCCCTCCCTTTCCTCTGCATATCCACAGTTGGGTCTGATCTCTTTCAC
GCTATTTATGGTCCAGAGCTTCGAGACTCAGGTGAACGAGGCCACGCTAC
TGGCGTTTGAGGTACGGAAATAATAACGGCACCTCATGCCACCTTTCTCC
CAAATGCATCACCGCCATCTCTCGTCACCACATCCACAGTACTCCCACAT
CTTCGTCTTCTCATTTGCCATCGTCTACGTGATTCAGTCTGCGGTTGTTA
TCGCCTGTATCAACCCCATCAAGCGACGCCTCATCCGCCTGCACGCGTAC
GGAGATGCCGTAGTCGCCGCCGTCGCTGCCACCGTCCCCCAACCCTCTCA
ATATCCTCCCACTGGTGATCGGAATAGTGATCTCTCCGTGCTAGACCGGC
TATATGCCTTAATTTGTTGTGCATTTGGCGGTGCATCGGGGGCGTCGCCG
ACACTGAGCCGCAGCAAGGAGGCCGTACGCGCCTTCGACGGGTTCCGGGC
TTTTCGTCGGAAGTTTCTGAGGAAACATAGCTTGCCCGCATGTTTTCTAT
TCGACCACTACCTTATCGAAGTTTATGACCGCTGGGTAATATTGAAGCTG
GATATTGCTACCTGGTGCTGGGCGCTTATGTGCGTCATATTCGGTATTCA
CGCCCTAGTGGCGCGCTTTCCCCACTTTGCAGCCTTCTGCCTCAACCGCT
GGACATTCTTGTGCTATGGCTGGCTCCTTCTTCTCGCGGATTACACACTC
TTCATCCTTGTCCATAGGGTGCGTGGGGATGGGGTAGGCTGCTCTGCTTG
CATGACAGGCAAATCTGAACTCACCTCACCCACCACCATACTCTACCGAT
CCCATCCATCAGGTGCACGAACGTGTCCTCAAACAGGTCCGATCAAGTAA
CAGCGACAGTCTCAGCGTCAGCACCACCTCTTCCACGTGTTCCATAGCCA
ACGGGAGCATGCGCTCGAGCTCTGCCGCGAGCGTCGATGCGGCTGGTGGT
AGCGGTGGGTCAGTTGGGCAGATGGGAGAGGAGGATGTCATGGAGGAGCT
GCGACAGCGGCGGGCGGCGCTGCATGCCCAGTATTTCCGTGAACAGAAAG
AAAAAGATGGGGCTCATGAGATAATAGACGCCGGAATCGGAGAGAACGGA
AATGAGCATGCGGATGTGGGTGTCCTGCGGCACCCTCCCCGGCACTGGCA
CTGGGGCGTCGCCAACCTGCTGAATGCTGGTGGCATCACTAACAACACCC
CTACGAACAACGTCGTTGCCGACGGGGCCCTAGGATTTACCCTGTGGGAA
AGTTTTGCTTTTAACTACGGCACCGAGGCACTCAGCATAATTAGGTGCCT
GTATCTGGCCGCGTGGCCATGCACATATACTGTGCCCGCTTTCGGGGAGT
GGTTCTCCACCGGCTGGGCGCTCTTATACATCCTCGTTATTCCCATCCCG
GTATGTCTTTGTGTTTTTGGTCGCACTCCAATCTTTTCCAAGCAGTGATA
GGAATGCCAATGCCACGCCTATTATCTTAATTTGTCTCTTCTAACATCAA
ATACGTGTAAATAATCTGCAGGCCATCATCACCGGTACCGTCCTCATTCC
GCGTATGGCCACGCGATTCCTCCTTGTGGGATCTCTTTCCGTCCTAAATC
TCGAGGCGTTCGATGCGGTCGTCGAGGTGAGACCATAGACTTATCTTGCG
TGTATGTTTGTGAGCGTGAGTGTACCGGTACTTAAAGACGAAGTCCGGTT
GGTGGTTTGAGTGTACTCTTGATTTTTTTCCGCGTCTTGCTGCCCAGTTC
GTTCAATTTTCTCCCCTATCCCACTTAATTACGACACGAAAAGTACATGG
AGGATGCCGAGGCCGCGCTTAAAGACATCGCGCATCTCCTGCAACGCCTC
ACCAACATAAATGACACGGGAGCTAGCAGCGTGGAGCAGCTCTTCGCTTC
TCTGGCCCAGCACCATCGTCACCATCGCCTTTCTCCCTCCGATCTCACCC
ATGCCACCAACGCACGCGTCGCCCGTGCCCTTTCCCAGACCAACCCCCCC
GAAAGCAGTAGCTTCATCACATATGCCGAGCTCCGCGACTTCTTACGGCA
CCACGGAGTGCACCTCCCTCTTCGCCGCTTCCGCGCGCTGGTCCGCTTCA
TCGACTTGGACCTAGGTGGCCACGTGAATTTGGAGGATTTCAGAGCCCTA
CTCCGGGCCGATCACCTCTTTGAAGCCCAGAGGCCTCATCAGTGCCCGTC
GTCGGCTCGTGTTGCACGACTCCTCAGCCAGGATACCCTGAACTATCATC
CCCAAAATAGTTTGCATGGGCAGGACGCGGTGTTTGCAGACGTGGGGCAA
TTGCTTCGGCGAGGGAGCAGAGCCTTTTTAAGTCGAGTTACGCGGTCTAT
GGAACAAAGGGATAGTAGTGATCGAGCAGGGGGTGTAACTGCGGCTTCGG
GGGTGTAATTTAATCGGTTGTTGTACATAATTAATGCTATAAAGTAGAAA
AATCTCGACCTTTTCAACGCGTCTAC back to topCoding sequence (CDS) from alignment at chr2:53252..56977+ >NO02G00140.1 ID=NO02G00140.1|Name=NO02G00140.1|organism=Nannochloropsis oceanica|type=CDS|length=2205bp|location=Sequence derived from alignment at chr2:53252..56977+ (Nannochloropsis oceanica) ATGCTGAACACTTCTGAGCTGCGGCCGCGACGGAAATTGGGGGAGGGAGC GCACGGGGGGGGGAAGAATGTCTTTGAGATGGCACTGTCTGGGATGGACC AGATGATGATCGGGTGGATGATGGTGGCGGTCGTTTTCAGCCAGCTCGTC CTTGACGAGGTACTAAGGCGGGCAGAGGCCTCAGTCGGGACGAATGCGCG TGCATGCCTGCGAGAGGTGTATAAGGAATTGTCCACGTTGGGTCTGATCT CTTTCACGCTATTTATGGTCCAGAGCTTCGAGACTCAGGTGAACGAGGCC ACGCTACTGGCGTTTGAGTACTCCCACATCTTCGTCTTCTCATTTGCCAT CGTCTACGTGATTCAGTCTGCGGTTGTTATCGCCTGTATCAACCCCATCA AGCGACGCCTCATCCGCCTGCACGCGTACGGAGATGCCGTAGTCGCCGCC GTCGCTGCCACCGTCCCCCAACCCTCTCAATATCCTCCCACTGGTGATCG GAATAGTGATCTCTCCGTGCTAGACCGGCTATATGCCTTAATTTGTTGTG CATTTGGCGGTGCATCGGGGGCGTCGCCGACACTGAGCCGCAGCAAGGAG GCCGTACGCGCCTTCGACGGGTTCCGGGCTTTTCGTCGGAAGTTTCTGAG GAAACATAGCTTGCCCGCATGTTTTCTATTCGACCACTACCTTATCGAAG TTTATGACCGCTGGGTAATATTGAAGCTGGATATTGCTACCTGGTGCTGG GCGCTTATGTGCGTCATATTCGGTATTCACGCCCTAGTGGCGCGCTTTCC CCACTTTGCAGCCTTCTGCCTCAACCGCTGGACATTCTTGTGCTATGGCT GGCTCCTTCTTCTCGCGGATTACACACTCTTCATCCTTGTCCATAGGGTG CACGAACGTGTCCTCAAACAGGTCCGATCAAGTAACAGCGACAGTCTCAG CGTCAGCACCACCTCTTCCACGTGTTCCATAGCCAACGGGAGCATGCGCT CGAGCTCTGCCGCGAGCGTCGATGCGGCTGGTGGTAGCGGTGGGTCAGTT GGGCAGATGGGAGAGGAGGATGTCATGGAGGAGCTGCGACAGCGGCGGGC GGCGCTGCATGCCCAGTATTTCCGTGAACAGAAAGAAAAAGATGGGGCTC ATGAGATAATAGACGCCGGAATCGGAGAGAACGGAAATGAGCATGCGGAT GTGGGTGTCCTGCGGCACCCTCCCCGGCACTGGCACTGGGGCGTCGCCAA CCTGCTGAATGCTGGTGGCATCACTAACAACACCCCTACGAACAACGTCG TTGCCGACGGGGCCCTAGGATTTACCCTGTGGGAAAGTTTTGCTTTTAAC TACGGCACCGAGGCACTCAGCATAATTAGGTGCCTGTATCTGGCCGCGTG GCCATGCACATATACTGTGCCCGCTTTCGGGGAGTGGTTCTCCACCGGCT GGGCGCTCTTATACATCCTCGTTATTCCCATCCCGGCCATCATCACCGGT ACCGTCCTCATTCCGCGTATGGCCACGCGATTCCTCCTTGTGGGATCTCT TTCCGTCCTAAATCTCGAGGCGTTCGATGCGGTCGTCGAGTACATGGAGG ATGCCGAGGCCGCGCTTAAAGACATCGCGCATCTCCTGCAACGCCTCACC AACATAAATGACACGGGAGCTAGCAGCGTGGAGCAGCTCTTCGCTTCTCT GGCCCAGCACCATCGTCACCATCGCCTTTCTCCCTCCGATCTCACCCATG CCACCAACGCACGCGTCGCCCGTGCCCTTTCCCAGACCAACCCCCCCGAA AGCAGTAGCTTCATCACATATGCCGAGCTCCGCGACTTCTTACGGCACCA CGGAGTGCACCTCCCTCTTCGCCGCTTCCGCGCGCTGGTCCGCTTCATCG ACTTGGACCTAGGTGGCCACGTGAATTTGGAGGATTTCAGAGCCCTACTC CGGGCCGATCACCTCTTTGAAGCCCAGAGGCCTCATCAGTGCCCGTCGTC GGCTCGTGTTGCACGACTCCTCAGCCAGGATACCCTGAACTATCATCCCC AAAATAGTTTGCATGGGCAGGACGCGGTGTTTGCAGACGTGGGGCAATTG CTTCGGCGAGGGAGCAGAGCCTTTTTAAGTCGAGTTACGCGGTCTATGGA ACAAAGGGATAGTAGTGATCGAGCAGGGGGTGTAACTGCGGCTTCGGGGG TGTAA back to top
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