NO01G05830.1, NO01G05830.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G05830.1
Unique Name	NO01G05830.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2352
Alignment location	chr1:1635628..1640457 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:1635628..1640457 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO01G05830.1 vs.
Match: EWM22804.1 (inositol polyphosphate phosphatase-like isoform cra_a [Nannochloropsis gaditana])

HSP 1 Score: 456.4 bits (1173), Expect = 1.700e-124
Identity = 340/757 (44.91%), Postives = 416/757 (54.95%), Query Frame = 0

Query:    1 MASAPPQLGAEEDEEEDEADGREEEEESGGEGTEVQNEEDKEEEEGKEAMGTGHPSCVSLTSRNTGGGGGRWTRPSNRRSISFGPGRPRSPSSPGGGGGPPQLFTATGASSHLGEKEGGKKRQQREIGEIEVSSGSMEKEQAHVVEGEEVCVVEGTGPADVSAGLREAWAWVPHMDELIRSMRDRLVFWHFREGMITFPPSYRWHKVAPPTPSPLNPPPPPPPRLALSSSSPSVPSLPLQDCKREARDEGGRGGGGGNMLYSKTISVGACEEDSRSGGRNGMGSGNIGSATAMRMLGRSSSSSSSGISSKKSSEPKNPFEGPRRSL-ESVAESEGGRGRGDEEEGLLAGDYTDLDRLKSSYTTSVQ-KRPARPPLMSMLSRGEAGYSGENQSQDRVVLAP-KRSSLRTPSYTDRILTHSLPGKNHCLRWRHYDMADHVALSDHRPVCAALELNVDRSIRGFGIL-PPPSLPHSHPESTHEREPEATAIADDLVLFHIFLGRPRLEGRLATSILS----GRSSGSGIGCTRGSSSTVASSLSSPTLLFKSPPYEVTVLFPLVSEDPLVDQRQFCTLGDAFPGFGPLREDGEEMGGVERGAGGPKTANNANLNSRQRAVSQ---------GAALSEHQQRQQ------QQMGGKDDKEVPLGGVKHVPWALFPQTMHVVASRRFSEHILIKIKDSHNRDLGQAVIPVALGFPPGATDFKASSALPAFPEVKERVRVALSSGGVFKGTLVLDMSVIVQAL 735
            MASAPP+LG EE+E                        E++EEEE +E                  GGG +  R + +  +   P       +      P         S  LG     +  + REI E+++ +   + E+     G      E    A+V   L++AW WVP +DELIRSM+DRLVFWHF+EG I FPPSYRW KVA           PPP         PS+  LP +      R    R   GG      T+ V   ++D+ S   +                 R S     G +  K    K P E  R  L + VA  +GG G G     LLAGD+TD  RL SSYTTSVQ K+ ARP L  MLS+G    +G     D  +  P KRSSLRTPSYTDRILTHSLPGK+H LRWRHYDMAD+VALSDHRPVCAAL+L VDR +RGF ++ PPPSLP S P S   RE + +++ADDLVLFHI+LGRPRLEGRLA+S+L      R   S     + S +      +S TL +   PYEVTVLFPLVSEDPLV+QRQ C+LG+A P F          GG  RG+ G    N A+L + +  +SQ         GA L    + Q          GGK  +EVP+G VKHVPW  FPQ MHVVASRRFSEH+L+KI+DS  +DLGQAVIP+ALGF PGA +F ASS +P FP +KERVRVALSSGGVFKG L LD+SV VQAL
Sbjct:  784 MASAPPKLGDEEEE------------------------EEEEEEEEEE---------------EEEGGGEKEGRGAQQGGVCAPPVSDSQTRTIPASLRP---------SRSLGNVRN-RAEEGREIVELKLLTPLQKGEEGKWENGVPESAQED---AEVLKQLQQAWEWVPRLDELIRSMKDRLVFWHFKEGGIAFPPSYRWRKVA-----------PPP-------LPPSL--LPSRTSSLRPR----RSSAGG------TVDV---DQDAESRASD---------------CARKSLEGREGRTGGKEEGRKRPVESEREVLGQGVAGGDGG-GEGGAANDLLAGDFTDTGRLSSSYTTSVQKKKKARPSLFKMLSKGAGSSAG-----DATLSGPVKRSSLRTPSYTDRILTHSLPGKSHYLRWRHYDMADNVALSDHRPVCAALDLTVDRRVRGFQVVSPPPSLPLSLP-SYGSRETDKSSLADDLVLFHIYLGRPRLEGRLASSLLPALGVSRDPASAGEGNKTSKNKSRFGGASSTLKWAGGPYEVTVLFPLVSEDPLVEQRQLCSLGEAIPAF----------GGSSRGSQG----NTADLQNSRTGLSQQGTCSRSSSGAPLHSGGKSQSPVEGSLSHQGGKGGEEVPMGEVKHVPWESFPQIMHVVASRRFSEHVLVKIQDSRLQDLGQAVIPIALGFSPGAKEFAASSIIPPFPVMKERVRVALSSGGVFKGMLTLDLSVTVQAL 1419

The following BLAST results are available for this feature:

BLAST of NO01G05830.1 vs.

BLAST of NO01G05830.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22804.1	1.700e-124	44.91	inositol polyphosphate phosphatase-like isoform cr...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO01G05830	NO01G05830	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO01G05830.1	NO01G05830.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO01G05830.1.cds1	NO01G05830.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G05830.1.cds2	NO01G05830.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G05830.1.cds3	NO01G05830.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G05830.1.cds4	NO01G05830.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G05830.1.cds5	NO01G05830.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G05830.1.cds6	NO01G05830.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G05830.1.cds7	NO01G05830.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G05830.1.cds8	NO01G05830.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G05830.1.cds9	NO01G05830.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G05830.1.cds10	NO01G05830.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G05830.1.cds11	NO01G05830.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G05830.1.cds12	NO01G05830.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G05830.1.cds13	NO01G05830.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr1:1635628..1640457+
coding sequence from alignment at chr1:1635628..1640457+

mRNA sequence

>NO01G05830.1 ID=NO01G05830.1|Name=NO01G05830.1|organism=Nannochloropsis oceanica|type=mRNA|length=2352bp
ATGGCCTCGGCACCACCACAGCTGGGCGCAGAGGAGGACGAGGAAGAGGA
CGAGGCGGATGGAAGGGAGGAGGAGGAGGAAAGTGGAGGGGAAGGGACGG
AGGTCCAAAATGAGGAGGACAAGGAGGAGGAGGAAGGGAAGGAGGCGATG
GGAACCGGCCATCCGTCGTGCGTCTCCCTAACGTCGAGAAACACGGGAGG
TGGAGGCGGGCGGTGGACGAGACCCAGCAACAGGCGATCCATCTCCTTTG
GCCCGGGCCGCCCTCGCTCCCCTTCCTCTCCAGGCGGTGGTGGAGGACCG
CCCCAGCTTTTCACCGCCACTGGCGCGTCCTCGCATTTGGGGGAGAAGGA
GGGGGGGAAGAAGAGGCAGCAGCGGGAGATCGGCGAGATCGAGGTATCGA
GTGGATCGATGGAGAAGGAACAAGCGCATGTGGTGGAGGGGGAGGAAGTC
TGTGTGGTGGAGGGCACTGGCCCCGCGGACGTCTCGGCCGGGCTGCGGGA
GGCCTGGGCGTGGGTCCCGCATATGGACGAGCTCATCCGCTCCATGCGAG
ACCGGCTGGTTTTCTGGCACTTTCGAGAAGGAATGATCACCTTCCCTCCC
TCCTACCGCTGGCACAAGGTCGCGCCTCCCACTCCTTCCCCTCTAAATCC
CCCTCCTCCTCCTCCACCCCGTCTGGCTTTATCGTCTTCTTCTCCCTCTG
TGCCTTCTTTGCCCTTGCAGGACTGCAAGCGGGAGGCAAGAGATGAAGGG
GGAAGAGGGGGAGGTGGCGGAAATATGCTGTACAGCAAGACGATTTCTGT
AGGGGCCTGCGAGGAGGACAGCAGGAGCGGAGGCAGAAATGGGATGGGGA
GTGGCAACATCGGGAGTGCGACGGCGATGAGAATGTTGGGCAGAAGCAGC
AGCAGCAGCAGCAGCGGCATCAGCAGTAAGAAGAGCAGCGAACCGAAGAA
CCCGTTTGAAGGGCCGCGACGATCCTTGGAGAGTGTGGCCGAGTCGGAAG
GAGGAAGAGGAAGAGGGGATGAGGAGGAGGGGCTGCTGGCGGGCGATTAC
ACGGATTTGGATCGGCTAAAGTCCTCTTACACGACCTCCGTGCAGAAACG
GCCCGCCCGTCCGCCCCTGATGAGCATGCTCTCTCGAGGAGAAGCAGGTT
ACTCCGGCGAGAATCAATCCCAAGACAGGGTGGTCCTCGCGCCCAAGCGC
TCCAGTCTTCGCACTCCCTCCTACACCGATCGCATTCTCACCCACTCCCT
CCCCGGCAAGAATCACTGTCTCCGTTGGCGTCATTACGACATGGCCGACC
ACGTCGCCTTGAGTGACCATCGACCCGTTTGTGCCGCCCTCGAGCTCAAC
GTCGACCGGAGCATCCGTGGCTTCGGAATCTTGCCCCCTCCTTCCCTCCC
TCACTCCCACCCTGAGTCCACGCACGAGCGTGAGCCAGAGGCGACCGCGA
TTGCTGACGATCTAGTCCTTTTTCACATCTTCCTTGGCCGGCCTCGCCTG
GAAGGCCGCCTGGCCACTAGTATCCTTTCGGGGCGGAGCTCCGGAAGCGG
GATTGGCTGCACCCGCGGCAGCAGCAGCACCGTTGCCTCCTCATTGTCTT
CTCCCACCTTATTATTTAAATCGCCTCCTTATGAAGTGACCGTCCTCTTC
CCCCTCGTCTCGGAGGATCCTCTGGTGGATCAACGTCAGTTCTGCACTCT
TGGCGACGCTTTCCCTGGCTTCGGCCCTCTTCGCGAGGATGGAGAGGAGA
TGGGCGGCGTCGAGCGTGGAGCGGGGGGGCCTAAAACGGCCAATAACGCC
AATTTAAACTCCCGCCAGCGGGCAGTCTCCCAGGGGGCTGCATTGTCAGA
GCATCAACAGCGGCAGCAGCAGCAGATGGGGGGTAAAGATGACAAGGAAG
TTCCATTGGGAGGGGTCAAACATGTGCCTTGGGCCCTGTTCCCTCAGACC
ATGCATGTCGTCGCTTCGCGCCGTTTCTCTGAGCACATCTTAATCAAGAT
CAAGGACAGTCACAACCGAGATTTGGGTCAGGCCGTTATACCCGTTGCAC
TCGGCTTTCCGCCAGGCGCGACAGATTTTAAGGCCTCCTCGGCTCTTCCC
GCTTTTCCCGAGGTTAAAGAGCGCGTGCGCGTTGCATTGTCGAGCGGGGG
CGTCTTTAAGGGTACGCTCGTCTTAGATATGAGTGTCATAGTGCAAGCCC
TCCCTTCCAAGCTCGCAAAGCATAATTCTACAATCAAAAAAGCCACGAAC
AACGCACCTGCTAGCGTCCCCACCGTCGCACACACATTAACAAATAAGAG
TTCTGCTCCCATGGTTCCCACGTTGGCGCCTTCTTCAGCAGAGAGGCGCT
AA

protein sequence of NO01G05830.1

>NO01G05830.1-protein ID=NO01G05830.1-protein|Name=NO01G05830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=784bp
MASAPPQLGAEEDEEEDEADGREEEEESGGEGTEVQNEEDKEEEEGKEAM
GTGHPSCVSLTSRNTGGGGGRWTRPSNRRSISFGPGRPRSPSSPGGGGGP
PQLFTATGASSHLGEKEGGKKRQQREIGEIEVSSGSMEKEQAHVVEGEEV
CVVEGTGPADVSAGLREAWAWVPHMDELIRSMRDRLVFWHFREGMITFPP
SYRWHKVAPPTPSPLNPPPPPPPRLALSSSSPSVPSLPLQDCKREARDEG
GRGGGGGNMLYSKTISVGACEEDSRSGGRNGMGSGNIGSATAMRMLGRSS
SSSSSGISSKKSSEPKNPFEGPRRSLESVAESEGGRGRGDEEEGLLAGDY
TDLDRLKSSYTTSVQKRPARPPLMSMLSRGEAGYSGENQSQDRVVLAPKR
SSLRTPSYTDRILTHSLPGKNHCLRWRHYDMADHVALSDHRPVCAALELN
VDRSIRGFGILPPPSLPHSHPESTHEREPEATAIADDLVLFHIFLGRPRL
EGRLATSILSGRSSGSGIGCTRGSSSTVASSLSSPTLLFKSPPYEVTVLF
PLVSEDPLVDQRQFCTLGDAFPGFGPLREDGEEMGGVERGAGGPKTANNA
NLNSRQRAVSQGAALSEHQQRQQQQMGGKDDKEVPLGGVKHVPWALFPQT
MHVVASRRFSEHILIKIKDSHNRDLGQAVIPVALGFPPGATDFKASSALP
AFPEVKERVRVALSSGGVFKGTLVLDMSVIVQALPSKLAKHNSTIKKATN
NAPASVPTVAHTLTNKSSAPMVPTLAPSSAERR*

mRNA from alignment at chr1:1635628..1640457+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO01G05830.1 ID=NO01G05830.1|Name=NO01G05830.1|organism=Nannochloropsis oceanica|type=mRNA|length=4830bp|location=Sequence derived from alignment at chr1:1635628..1640457+ (Nannochloropsis oceanica)
ATGGCCTCGGCACCACCACAGCTGGGCGCAGAGGAGGACGAGGAAGAGGA
CGAGGCGGATGGAAGGGAGGAGGAGGAGGAAAGTGGAGGGGAAGGGACGG
AGGTCCAAAATGAGGAGGACAAGGAGGAGGAGGAAGGGAAGGAGGCGATG
GGAACCGGCCATCCGTCGTGCGTCTCCCTAACGTCGAGAAACACGGGAGG
TGGAGGCGGGCGGTGGACGAGACCCAGCAACAGGCGATCCATCTCCTTTG
GCCCGGGCCGCCCTCGCTCCCCTTCCTCTCCAGGCGGTGGTGGAGGACCG
CCCCAGCTTTTCACCGCCACTGGCGCGTCCTCGCATTTGGGGGAGAAGGA
GGGGGGGAAGAAGAGGCAGCAGCGGGAGATCGGCGAGATCGAGGTAGGGA
GGGAGGGAGGGACGGGAGTAGAGCTGACTGACAGTAGATTGAGAGTAGGA
AAAGCGAATTGGTGGAATGAAAAGTTGGGGGATTTCTGGGTGTATAGCGG
TCCGTTATATATATATATACATATATATATATTCTGTGTCTGTGTCTGTG
TCTCTGTCTCTGTCTCTGACTCTGTCTGTGTGTCTGCCTGTCTCTGTCTC
TGTCTCTGTCTCTGTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTC
TCTGTCTCTGTCTGTGTGTCTGTGTCTGTGTCTGTGTCTGTGTCTGTGTC
TGTCTGTGTCTGTGTCCGTGTCGGTGTGTGCGTGTGTGTCGGTGTGTGCG
TGTGTGTCTGTGTGCGTCTGTGTCTGTGTCTGTGTGCGTCTGTGTCTGTG
TCTGTGTCTGTGTCTGTGTCTTTGTCTCTGTCTGTCTGTGTCTGTGTCTG
TGTATGTGTGCGTGTGTGTCTGTGTGTGTCCGTGTGTCCGTGTGTGTGTG
TGTGTGTGTGTGTGTGTCCGTGTGTCCGTGTGTCCGTGTGTGTGTGTGTG
TGTGTGTGTGTTTTTGTGTGTCCTTTTTTTCCTAATGTTCCTCGCTTTGT
TTACCCTTACACATGACAGGTATCGAGTGGATCGATGGAGAAGGAACAAG
CGCATGTGGTGGAGGGGGAGGAAGTCTGTGTGGTGGAGGGCACTGGCCCC
GCGGACGGTAAGACGAGAGAAACGGAGGGAGAGAGACAGACACATAGACA
CACAGATACAGACACATAGACACACAGACACACAGACACAGAAAGACTGC
CTGGTTGCTGCCTGCTTGCTCTCCTTCCCTTCGCTCACATATCCGTAGCA
ACCCCTCTCCATCCCTCTCCCCCTTCCTCCCTTCCTCCTTCCGTCTCTGC
ACATCTGCCACTCACTGGCCCTCCCTCTTTCCCTCCCTCCCCTCCTCTCA
CCCTCCCTCCCTCATCCTTCTTCCCTAGTCTCGGCCGGGCTGCGGGAGGC
CTGGGCGTGGGTCCCGCATATGGACGAGCTCATCCGGTACGTGGGAGAGA
AGGAGGCAGGGGATAGAGAAGAGGCTGAGAGAAAGGAAGAGAGTGCATTT
TCTCATCCCTTCTGATCTCCTGTCCATTCCTCCCTCTCCCCCTCCCTCTC
TTTTTTCCTTCATTCCCAGCTCCATGCGAGACCGGCTGGTTTTCTGGCAC
TTTCGAGAAGGAATGATCACCTTCCCTCCCTCCTACCGCTGGCACAAGGT
CGCGCCTCCCACTCCTTCCCCTCTAAATCCCCCTCCTCCTCCTCCACCCC
GTCTGGCTTTATCGTCTTCTTCTCCCTCTGTGCCTTCTTTGCCCTTGCAG
GACTGCAAGCGGGAGGCAAGAGATGAAGGGGGAAGAGGGGGAGGTGGCGG
AAATATGCTGTACAGCAAGACGATTTCTGTAGGGGCCTGCGAGGAGGACA
GCAGGAGCGGAGGCAGAAATGGGATGGGGAGTGGCAACATCGGGAGTGCG
ACGGCGATGAGAATGTTGGGCAGAAGCAGCAGCAGCAGCAGCAGCGGCAT
CAGCAGTAAGAAGAGCAGCGAACCGAAGAACCCGTTTGAAGGGCCGCGAC
GATCCTTGGAGAGTGTGGCCGAGTCGGAAGGAGGAAGAGGAAGAGGGGAT
GAGGAGGAGGGGCTGCTGGCGGGCGATTACACGGATTTGGATCGGCTAAA
GTTAGTGTATGGGGAGGAGGTCGGGGAGGAGAGACGGACGGACGGGCTGA
CGGACGACGGACGGAAGGACATAGATTGCTGGACGACGTGCGTAAAGCGA
AGACATGCAGAGAGCTTCATTCTTACCTCTTGCAATGCCCCTCCGTCCCT
CCCTTCCTCCCTCCCCCCTCAGGTCCTCTTACACGACCTCCGTGCAGAAA
CGGCCCGCCCGTCCGCCCCTGATGAGCATGCTCTCTCGAGGAGAAGCAGG
TAAGTCTATCCAATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCACCGTCATCATTCTTCG
CCTTCCTCCCACCAATATCCTCACACCCCTCCCTCCCTCCCACACTCCAC
CCTCCCTCCTGGTCCAGGTTACTCCGGCGAGAATCAATCCCAAGACAGGG
TGGTCCTCGCGCCCAAGCGCTCCAGTCTTCGCACTCCCTCCTACACCGAT
CGCATTCTCACCCACTCCCTCCCCGGTACGTGGCAAAAAAAGAAAAAGGA
CAAGGAGACTGAAGGGAATGGAGGTGGGGGCTCCTGGATGAAGCCTCAGG
TGTTGGTGGCCTTGTCCTCTTCTGCCTCTTATTGTCTTATGAGTGGTCGG
GCCTTCCCTAATTTTCTATACTTCCTACACCTAACCCTCGCCTATCCTTC
CTCCTTCCCCTCCCTGCAGGCAAGAATCACTGTCTCCGTTGGCGTCATTA
CGACATGGCCGACCACGTCGCCTTGAGTGTACGTTTCGAGGGAGGGAGGG
AGGGAGGGAGGGACGAGAGATGCCCGTGGCTTCTTAAATTTTCTAGGGAA
TGGCTCCTGTGTTACTTCATTCGTCTATCTAACCCCCCTCCCTTCCTATC
CCTGTCCTCCCACAGGACCATCGACCCGTTTGTGCCGCCCTCGAGCTCAA
CGTCGACCGGAGCATCCGTGGCTTCGGAATCTTGCCCCCTCCTTCCCTCC
CTCACTCCCACCCTGAGTCCACGCACGAGCGTGAGCCAGAGGCGACCGCG
ATTGCTGACGATCTAGTCCTTTTTCACATCTTCCTTGGCCGGCCTCGCCT
GGAAGGTAGGAAATGACAAAGGGAGGGAGAAAGGGAGAGAGGGAGGGGGG
AACAGGAAGTTGGGCGCTGGCCCTCGACAACATCCGCCACCCTTCTTTTG
GGGAACTGTACTTTAGCGTGTACTCTCAATCTTCCATTTTTAAGACCTCT
CAACCTCCTTCCATCCATCCCTCCCTCTCGTCCTCCTCCCGCAGGCCGCC
TGGCCACTAGTATCCTTTCGGGGCGGAGCTCCGGAAGCGGGATTGGCTGC
ACCCGCGGCAGCAGCAGCACCGTTGCCTCCTCATTGTCTTCTCCCACCTT
ATTATTTAAATCGCCTCCTTATGAAGTGACCGTCCTCTTCCCCCTCGTCT
CGGAGGATCCTCTGGTGGATCAACGTCAGTTCTGCACTCTTGGCGACGTA
CGTTTTTCCGTCCTCCCTTTTTCTTGCCGGCCAGACTTCCATTCCCTCCC
CCCCGGGTACTGGTAGTTTGCAAACGCGACGTTTTGTCTTTCCTCACTCG
TGTTTGATTCATACGTATACACACACACAACACACTTTTCAGGCTTTCCC
TGGCTTCGGCCCTCTTCGCGAGGATGGAGAGGAGATGGGCGGCGTCGAGC
GTGGAGCGGGGGGGCCTAAAACGGCCAATAACGCCAATTTAAACTCCCGC
CAGCGGGCAGTCTCCCAGGGGGCTGCATTGTCAGAGCATCAACAGCGGCA
GCAGCAGCAGATGGGGGGTAAAGATGACAAGGAAGTTCCATTGGGAGGGG
TCAAACATGTGCCTTGGGCCCTGTTCCCTCAGACCATGCATGTCGTCGCT
TCGCGCCGTTTCTCTGAGCACATCTTAATCAAGGTAGGGAGGGGTGGAAG
AGGGAAGCGACTGGTCAAGCAAGCGAGTCGATGGGCTTATGCAAGCTTCC
TTAAATTGGAAACCAAAAACCTTTCAGTTGAAAGACTTAAGATTGAAGAC
TTGAGAATTGAAAAACTTGAGAACCAAAGCTTTCAGATTGCGAAGATGCC
TTCATGTTCATGAATTTAGGCGTATAATCTCACTTCCGTCTCCTCACATT
TCCCATCTAACCATAAATAGATCAAGGACAGTCACAACCGAGATTTGGGT
CAGGCCGTTATACCCGTTGCACTCGGCTTTCCGCCAGGTAGAAAATGGAG
GGACCGGAGGTGTGGGAAGAATATGGCAGAGATACGAGTATATGCCCTTG
ATCCTTTTCCGTTTTTCACACACTTTGGTAACGCGCACACACTTGCAAAC
ATTTGGAAACAGGCGCGACAGATTTTAAGGCCTCCTCGGCTCTTCCCGCT
TTTCCCGAGGTTAAAGAGCGCGTGCGCGTTGCATTGTCGAGCGGGGGCGT
CTTTAAGTAAGTGTTTTATATCGTCGGTGTACATCATTTTAATGCATGAT
CCTCATCTCTTCGCTTTTTCATTTTTTCCACTTTCAGGGGTACGCTCGTC
TTAGATATGAGTGTCATAGTGCAAGCCCTCCCTTCCAAGCTCGCAAAGCA
TAATTCTACAATCAAAAAAGCCACGAACAACGCACCTGCTAGCGTCCCCA
CCGTCGCACACACATTAACAAATAAGAGTTCTGCTCCCATGGTTCCCACG
TTGGCGCCTTCTTCAGCAGAGAGGCGCTAA

Coding sequence (CDS) from alignment at chr1:1635628..1640457+

>NO01G05830.1 ID=NO01G05830.1|Name=NO01G05830.1|organism=Nannochloropsis oceanica|type=CDS|length=2352bp|location=Sequence derived from alignment at chr1:1635628..1640457+ (Nannochloropsis oceanica)
ATGGCCTCGGCACCACCACAGCTGGGCGCAGAGGAGGACGAGGAAGAGGA
CGAGGCGGATGGAAGGGAGGAGGAGGAGGAAAGTGGAGGGGAAGGGACGG
AGGTCCAAAATGAGGAGGACAAGGAGGAGGAGGAAGGGAAGGAGGCGATG
GGAACCGGCCATCCGTCGTGCGTCTCCCTAACGTCGAGAAACACGGGAGG
TGGAGGCGGGCGGTGGACGAGACCCAGCAACAGGCGATCCATCTCCTTTG
GCCCGGGCCGCCCTCGCTCCCCTTCCTCTCCAGGCGGTGGTGGAGGACCG
CCCCAGCTTTTCACCGCCACTGGCGCGTCCTCGCATTTGGGGGAGAAGGA
GGGGGGGAAGAAGAGGCAGCAGCGGGAGATCGGCGAGATCGAGGTATCGA
GTGGATCGATGGAGAAGGAACAAGCGCATGTGGTGGAGGGGGAGGAAGTC
TGTGTGGTGGAGGGCACTGGCCCCGCGGACGTCTCGGCCGGGCTGCGGGA
GGCCTGGGCGTGGGTCCCGCATATGGACGAGCTCATCCGCTCCATGCGAG
ACCGGCTGGTTTTCTGGCACTTTCGAGAAGGAATGATCACCTTCCCTCCC
TCCTACCGCTGGCACAAGGTCGCGCCTCCCACTCCTTCCCCTCTAAATCC
CCCTCCTCCTCCTCCACCCCGTCTGGCTTTATCGTCTTCTTCTCCCTCTG
TGCCTTCTTTGCCCTTGCAGGACTGCAAGCGGGAGGCAAGAGATGAAGGG
GGAAGAGGGGGAGGTGGCGGAAATATGCTGTACAGCAAGACGATTTCTGT
AGGGGCCTGCGAGGAGGACAGCAGGAGCGGAGGCAGAAATGGGATGGGGA
GTGGCAACATCGGGAGTGCGACGGCGATGAGAATGTTGGGCAGAAGCAGC
AGCAGCAGCAGCAGCGGCATCAGCAGTAAGAAGAGCAGCGAACCGAAGAA
CCCGTTTGAAGGGCCGCGACGATCCTTGGAGAGTGTGGCCGAGTCGGAAG
GAGGAAGAGGAAGAGGGGATGAGGAGGAGGGGCTGCTGGCGGGCGATTAC
ACGGATTTGGATCGGCTAAAGTCCTCTTACACGACCTCCGTGCAGAAACG
GCCCGCCCGTCCGCCCCTGATGAGCATGCTCTCTCGAGGAGAAGCAGGTT
ACTCCGGCGAGAATCAATCCCAAGACAGGGTGGTCCTCGCGCCCAAGCGC
TCCAGTCTTCGCACTCCCTCCTACACCGATCGCATTCTCACCCACTCCCT
CCCCGGCAAGAATCACTGTCTCCGTTGGCGTCATTACGACATGGCCGACC
ACGTCGCCTTGAGTGACCATCGACCCGTTTGTGCCGCCCTCGAGCTCAAC
GTCGACCGGAGCATCCGTGGCTTCGGAATCTTGCCCCCTCCTTCCCTCCC
TCACTCCCACCCTGAGTCCACGCACGAGCGTGAGCCAGAGGCGACCGCGA
TTGCTGACGATCTAGTCCTTTTTCACATCTTCCTTGGCCGGCCTCGCCTG
GAAGGCCGCCTGGCCACTAGTATCCTTTCGGGGCGGAGCTCCGGAAGCGG
GATTGGCTGCACCCGCGGCAGCAGCAGCACCGTTGCCTCCTCATTGTCTT
CTCCCACCTTATTATTTAAATCGCCTCCTTATGAAGTGACCGTCCTCTTC
CCCCTCGTCTCGGAGGATCCTCTGGTGGATCAACGTCAGTTCTGCACTCT
TGGCGACGCTTTCCCTGGCTTCGGCCCTCTTCGCGAGGATGGAGAGGAGA
TGGGCGGCGTCGAGCGTGGAGCGGGGGGGCCTAAAACGGCCAATAACGCC
AATTTAAACTCCCGCCAGCGGGCAGTCTCCCAGGGGGCTGCATTGTCAGA
GCATCAACAGCGGCAGCAGCAGCAGATGGGGGGTAAAGATGACAAGGAAG
TTCCATTGGGAGGGGTCAAACATGTGCCTTGGGCCCTGTTCCCTCAGACC
ATGCATGTCGTCGCTTCGCGCCGTTTCTCTGAGCACATCTTAATCAAGAT
CAAGGACAGTCACAACCGAGATTTGGGTCAGGCCGTTATACCCGTTGCAC
TCGGCTTTCCGCCAGGCGCGACAGATTTTAAGGCCTCCTCGGCTCTTCCC
GCTTTTCCCGAGGTTAAAGAGCGCGTGCGCGTTGCATTGTCGAGCGGGGG
CGTCTTTAAGGGTACGCTCGTCTTAGATATGAGTGTCATAGTGCAAGCCC
TCCCTTCCAAGCTCGCAAAGCATAATTCTACAATCAAAAAAGCCACGAAC
AACGCACCTGCTAGCGTCCCCACCGTCGCACACACATTAACAAATAAGAG
TTCTGCTCCCATGGTTCCCACGTTGGCGCCTTCTTCAGCAGAGAGGCGCT
AA

Synonyms

Publications