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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr1 | genome | chr1:1609762..1613523 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO01G05760.1 vs.
Match: EWM22796.1 (septin 7, partial [Nannochloropsis gaditana]) HSP 1 Score: 225.3 bits (573), Expect = 4.400e-55 Identity = 114/168 (67.86%), Postives = 129/168 (76.79%), Query Frame = 0
Query: 356 MTADETLAFRSLVHKECLNHKIRLFDFGQEAKQRVGIPPDLVVPPFAVVASNQFDEVRGSGSFWPVRDYRWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATDERYMVFRRTFYQ-AERAAAAETAATDKRRRQQWMLVSACLLGLWIVSSLVRTISGGEEGGGKGG 523
MTA+ETLAFRS V + C +H IRLFDFG EAK+RVGIP DLV PPFAVVASNQFDEV+GSGSFWPVRDY WGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQAT+ERYM +R ++YQ E A A A +K+R+ W+LV+ L L + V G EGG GG
Sbjct: 1 MTAEETLAFRSFVFEACQHHAIRLFDFGSEAKRRVGIPTDLVAPPFAVVASNQFDEVKGSGSFWPVRDYHWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATEERYMAYRCSYYQEKEEEARASRAKAEKQRQFGWLLVAVLL--LMGAAHAVFARLAGREGGRDGG 166
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO01G05760.1 ID=NO01G05760.1|Name=NO01G05760.1|organism=Nannochloropsis oceanica|type=mRNA|length=2796bp AAGGACGCCCGAAAGGCCAGGCATCAGGCACCATGACCACCTTCACTCCC TCTGACGCGCAGCATCAACTGCAGCAGCAGCAGGAAGAAGAACAGGATGG AGGCCAGGCGTCGTTTTTTGGCGTCATGTCGTACCATTCCCAGACGGTGC AAGTCACGGGAGGGGAAGAGCGAGATGGAGATGGCAAAGCTAGCGATGAA GACGACGAGAGTAAGATGTCTGCCTCCTCCTTGTCCTCGCAGTCTTTCCC TTCTCCGTCCTCCTCTGCGCTCTCGGCATTCATGCACGACCATCAGTTGC AGCAGCAACAGCAGCGTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG GGGGCAGAGGGCGACGCGTCCTCTTCCTCCACCTCTACCCCCTCCGTCCC TCTTCCTCCCCTCCCAGGCACCGCAGCCACGGCCACCGTTCCCGTCCCCC TCAAGAAGAGAATGGACGAGAGCATAGGCGACGAGTACCAGCGCATCGCG GCACAGAAGGCCCGGGGGGAACAGCGGCTGGCGGCCATGACCGCATCCAA GGAGCATGCACGCCGGAAGTTCCCACAGATGCGTCGTGTCTACACGGACT ATCACTTGAAGGTGATGGTGGCCGGGGAGGCGGGCCATGGCAAGACCACC TTCATCAACAATATGTTTTCGTCCTATACGCAAGGGCGAGATGTGAAAGA GCCGCCTTTGCCTCATGACGGGAGCCGTACAAAGACGAGCGATTTCCTCG CGGACCCTTCGGGCCTGTGCACGCGCTTCACGGTCACGAACGAGGAGGCC TTGGAACGAGTGCATTACACCATCCAGGACACGCCCGGTTTCGGAGACGA CACAGATATCTGCCGGTCGATTGACATGATCCTGAACTACATCGATGACT GCAATCAGACCTACCTGGAGGCCGAGAATGACACATCGCGCATGCAACCC TTGGGACAGTGCCCTGGAGGCGACGCGCGCGTGGACGTGTGCTTGTACTT CTTGGCGGCCCATCGCCTCAAGTGGATCGATATCAGGTTCATGCAGGCCA TCTCGGCTAAGGTGGCGCTCATTCCCCTCCTGGCCAAGGCGGACAGCATG ACAGCTGACGAGACCCTGGCCTTCCGGTCCTTAGTCCACAAGGAGTGCCT CAATCACAAGATCCGCCTCTTCGACTTCGGGCAGGAGGCGAAGCAGAGGG TGGGCATCCCTCCTGACCTGGTCGTGCCGCCCTTCGCCGTGGTGGCCTCC AATCAATTTGATGAGGTGAGGGGCAGTGGTTCCTTCTGGCCCGTGCGGGA CTACCGTTGGGGCACCTGCGAGGCTTTCTCCACCGAACACTCTGACTGCA CCTACCTTAAGAAACTACTCCTCGAGGAGGGTTTTCACGACCTTCGGCAA GCGACGGACGAGCGGTACATGGTCTTTCGTCGTACCTTCTATCAGGCGGA GCGAGCAGCAGCAGCAGAAACAGCAGCCACGGACAAGCGGCGACGACAGC AGTGGATGTTGGTGTCCGCTTGCCTCCTAGGCCTGTGGATCGTCTCCTCC CTTGTCCGGACCATCTCGGGGGGGGAGGAGGGAGGTGGGAAGGGAGGGCG GGAGGCGAAGGAGCCGTGGAAGGGATGCAGTGGAATGTGACGCAGGCAGG AGGAGAGCGAGAAGGAAGAGGAGGAGGAGGCTTCAGCATTTGGGGTGGCA AGTCGCCTGCTGATCTCCACGCCCTCTCGTCCCGCCTGGAGGAGAAGGAG GCAGCTCTGGTGTCGGCGGAGCACAAAATAGCCCTGCTCGTGAAGAGCGT CCATGAACTCGAGGAAACCACAGCCCGTCTGCTCACCCACAAGACCAAGG CCCAGCCCTCCCTCCCGTCCTCCCTCGCTTCCTCCTCGTTCCTGGAAGAG ATGAGTGCCAAGAGCCTGAGCGAGATTACCGACCTTCTCGAGGCGCTCGG CTTCACCGGCGGAGGACTGCTCCAGTCCCGAAGCCCTTCCTCCCCCGCCA CCTCCCCCCCTACCTCGGACTCGCAGAATGGGCGGGAGGGAGAGAAGGAA GGCGAGGCGACTTTACCTTCTTCTCCGGAGGCGCGCCAGCGCCACGCGTA CAAGAAGAGGCAGAAAGGGAGGGGAGGCAAAGAGGGTGGGAAGGCGGGAT GTGCGGTGATGCGGTGGTGGGAGGGCGTTGGTCAGTACCACGGAGACTAT CTGCAGGAAGGATGGAGGCGCTTTGGCCGGTGGTTTTCGTAGGGAGGGAG GGCTTTAGGGTGGGAAGAAGGGCTTTGAAGGAGGGGGGGAGGTTGTTGAT GTGGAACGAGGTGTTGATTTGAGAAGCATTTGGGATCCGGAGCGGTGTGT GTGTATGCGAGAAGATCCTACGATGAGGATTTAAGAGAAGGAGGAGGTTA AGAGAAGGAGGAGGAAGCAAAGATTTCTGCCGTTTTGTGGCGTTGGGGGA TGAGGGTCCTCGAGAGAGGGAGGGACGACGAGCCTGACGAGAAGGGGGTT GTGAGGAAAGACCCTACGGGGGAAAGAAGAAGAAGAAGAAGAAGAAGAAG AAGAAAACGATGAAGGAGAAGAGAAAGAAAGTAGATGAAAAAGAAGAAAA AATGATGACGATGAAAAAGAAGAAGGATGCATAGAAGAAGGATACATAGG ACGAGAAGAAGAAGAAGTAGAGGAAGAAGAAGAGGAGAAGGAGGAAGAAG AAGAAGAAAAAGAAGAAGAGGAAGAAGAGAAAAAAGAAGAGAAGAAGAAG ATGATGAAGAAGAAAAAGAAGAAGTAGAAGAATAAGGACCGTTCGC back to topprotein sequence of NO01G05760.1 >NO01G05760.1-protein ID=NO01G05760.1-protein|Name=NO01G05760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=536bp MTTFTPSDAQHQLQQQQEEEQDGGQASFFGVMSYHSQTVQVTGGEERDGD GKASDEDDESKMSASSLSSQSFPSPSSSALSAFMHDHQLQQQQQRQQQQQ QQQQQQGAEGDASSSSTSTPSVPLPPLPGTAATATVPVPLKKRMDESIGD EYQRIAAQKARGEQRLAAMTASKEHARRKFPQMRRVYTDYHLKVMVAGEA GHGKTTFINNMFSSYTQGRDVKEPPLPHDGSRTKTSDFLADPSGLCTRFT VTNEEALERVHYTIQDTPGFGDDTDICRSIDMILNYIDDCNQTYLEAEND TSRMQPLGQCPGGDARVDVCLYFLAAHRLKWIDIRFMQAISAKVALIPLL AKADSMTADETLAFRSLVHKECLNHKIRLFDFGQEAKQRVGIPPDLVVPP FAVVASNQFDEVRGSGSFWPVRDYRWGTCEAFSTEHSDCTYLKKLLLEEG FHDLRQATDERYMVFRRTFYQAERAAAAETAATDKRRRQQWMLVSACLLG LWIVSSLVRTISGGEEGGGKGGREAKEPWKGCSGM* back to topmRNA from alignment at chr1:1609762..1613523- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO01G05760.1 ID=NO01G05760.1|Name=NO01G05760.1|organism=Nannochloropsis oceanica|type=mRNA|length=3762bp|location=Sequence derived from alignment at chr1:1609762..1613523- (Nannochloropsis oceanica) AAGGACGCCCGAAAGGCCAGGCATCAGGCACCATGACCACCTTCACTCCC
TCTGACGCGCAGCATCAACTGCAGCAGCAGCAGGAAGAAGAACAGGATGG
AGGCCAGGCGTCGTTTTTTGGCGTCATGTCGTACCATTCCCAGACGGTGC
AAGTCACGGGAGGGGAAGAGCGAGATGGAGATGGCAAAGGTACGGCGTTT
GCTGGAGTGCGTAGACTGCTTAGGTTGTTCATGCGGGAACCAAGCGGATG
GGAATATCAAATCCCTCGCTTGTTCCTCCTAACCCTTCTGTTTTTACCAC
ACCCAAACACAGCTAGCGATGAAGACGACGAGAGTAAGATGTCTGCCTCC
TCCTTGTCCTCGCAGTCTTTCCCTTCTCCGTCCTCCTCTGCGCTCTCGGC
ATTCATGCACGACCATCAGTTGCAGCAGCAACAGCAGCGTCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGGGGGCAGAGGGCGACGCGTCCTCTTCC
TCCACCTCTACCCCCTCCGTCCCTCTTCCTCCCCTCCCAGGCACCGCAGC
CACGGCCACCGTTCCCGTCCCCCTCAAGAAGAGAATGGACGAGAGCATAG
GCGACGAGTACCAGCGCATCGCGGCACAGAAGGCCCGGGGGGAACAGCGG
CTGGCGGCCATGACCGCATCCAAGGAGCATGCACGCCGGAAGTTCCCACA
GATGCGTCGTGTCTACACGGACTATCACTTGAAGGTGATGGTGGCCGGGG
AGGCGGGCCATGGCAAGACCACGTACGTGCTGGCAAGGGAAGGAAGAAGG
GAGGGACGGAGGGAGGGAGGGAGGGCAGGTATTGTTGCCGTTATCGGGTC
GGAGTTATCGGTGAGAAACATCATTTTCCTTCTTCCTCTCCCCGCTCCCC
TCCTCCCCTCCTTTGCCAGCTTCATCAACAATATGTTTTCGTCCTATACG
CAAGGGCGAGATGTGAAAGAGCCGCCTTTGCCTCATGACGGGAGCCGTAC
AAAGACGAGCGATTTCCTCGCGGACCCTTCGGGCCTGTGCACGCGCTTCA
CGGTCACGAACGAGGAGGCCTTGGAACGAGTGCATTACACCATCCAGGAC
ACGCCCGGTTTCGGAGACGACACAGATATCTGCCGGTCGATTGACATGAT
CCTGAACTACATCGATGACTGCAATCAGGTGGGGGGGGGGGAGATGGGGA
GCTCCACGTCCCTCTCTCGTTATGCGCTTACTTCCTCGCAACACGTACTA
CTATACCCACAAGCACCCCTTCATCAAGTCCCTTCCTCCTTCCCTCCCTC
CCTCCTAGACCTACCTGGAGGCCGAGAATGACACATCGCGCATGCAACCC
TTGGGACAGTGCCCTGGAGGCGACGCGCGCGTGGACGTGTGCTTGTACTT
CTTGGCGGCCCATCGCCTCAAGTGGATCGATATCAGGTTCATGCAGGTGA
GGAGGGGGAGGGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAAAGTGAGG
GCGGGCGGGCGTATAGTGGTGGTTGTGGACGGACGGCTGGCCCATGAGGT
GTTTCTTCCTTTCGTACATCTCATCTCATGCCTAGTCCAACGCCCTCTTT
TCCCTTTTCCTCTTCCTCCTTCCCTCCCTCCCTCCCTTCCTCCCTCCTTT
CCCAGGCCATCTCGGCTAAGGTGGCGCTCATTCCCCTCCTGGCCAAGGCG
GACAGCATGACAGCTGACGAGACCCTGGCCTTCCGGTCCTTAGTCCACAA
GGAGTGCCTCAATCACAAGATCCGCCTCTTCGACTTCGGGCAGGAGGCGA
AGCAGAGGGTGGGCATCCCTCCTGACCTGGTCGTGCCGCCCTTCGCCGTG
GTGGCCTCCAATCAATTTGATGAGGTGCGTCGTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCGCCTTCCCTCCGCTCTGTCCTTCTTCCTTAGCCCGG
TACACTTACCCAGCACTCATTCGCCTTCCCTCCCTCCCTCCTTCTCTTCC
TCCTTTCTCTTTCCCAGGTGAGGGGCAGTGGTTCCTTCTGGCCCGTGCGG
GACTACCGTTGGGGCACCTGCGAGGCTTTCTCCACCGAACACTCTGACTG
CACCTACCTTAAGAAACTACTCCTCGAGGTATGCCCCCGTCCATCCCTCC
CTCTTACGAAGCCCTCAGTCCTCTCTTTTTCGCGCACAAAGACATTGTTG
AAACGTCTGATTCCTCCCTCCCGCCCTCCCGCCCTCTCTCCCTCCCGCCC
CCCCAGGAGGGTTTTCACGACCTTCGGCAAGCGACGGACGAGCGGTACAT
GGTCTTTCGTCGTACCTTCTATCAGGCGGAGCGAGCAGCAGCAGCAGAAA
CAGCAGCCACGGACAAGCGGCGACGACAGCAGTGGATGTTGGTGTCCGCT
TGCCTCCTAGGCCTGTGGATCGTCTCCTCCCTTGTCCGGACCATCTCGGG
GGGGGAGGAGGGAGGTGGGAAGGGAGGGCGGGAGGCGAAGGAGCCGTGGA
AGGGATGCAGTGGAATGTGACGCAGGCAGGAGGAGAGCGAGAAGGAAGAG
GAGGAGGAGGCTTCAGCATTTGGGGTGGCAAGTCGCCTGCTGATGTAAGT
GCGTTTTCCTACTATTCGTCCCCTTTCCCCTCTTCCTGCTCCTCGCACCC
GCTCACTTCACCCTTCCCTCCCTCCCTCAGCTCCACGCCCTCTCGTCCCG
CCTGGAGGAGAAGGAGGCAGCTCTGGTGTCGGCGGAGCACAAAATAGCCC
TGCTCGTGAAGAGCGTCCATGAACTCGAGGAAACCACAGCCCGTCTGCTC
ACCCACAAGACCAAGGCCCAGCCCTCCCTCCCGTCCTCCCTCGCTTCCTC
CTCGTTCCTGGAAGAGATGAGTGCCAAGAGCCTGAGCGAGATTACCGACC
TTCTCGAGGCGCTCGGCTTCACCGGCGGAGGACTGCTCCAGTCCCGAAGC
CCTTCCTCCCCCGCCACCTCCCCCCCTACCTCGGACTCGCAGAATGGGCG
GGAGGGAGAGAAGGAAGGCGAGGCGACTTTACCTTCTTCTCCGGAGGCGC
GCCAGCGCCACGCGTACAAGAAGAGGCAGAAAGGGAGGGGAGGCAAAGAG
GGTGGGAAGGCGGGATGTGCGGTGATGCGGTGGTGGGAGGGCGTTGGTCA
GTACCACGGAGACTATCTGCAGGAAGGATGGAGGCGCTTTGGCCGGTGGT
TTTCGTAGGGAGGGAGGGCTTTAGGGTGGGAAGAAGGGCTTTGAAGGAGG
GGGGGAGGTTGTTGATGTGGAACGAGGTGTTGATTTGAGAAGCATTTGGG
ATCCGGAGCGGTGTGTGTGTATGCGAGAAGATCCTACGATGAGGATTTAA
GAGAAGGAGGAGGTTAAGAGAAGGAGGAGGAAGCAAAGATTTCTGCCGTT
TTGTGGCGTTGGGGGATGAGGGTCCTCGAGAGAGGGAGGGACGACGAGCC
TGACGAGAAGGGGGTTGTGAGGAAAGACCCTACGGGGGAAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAAACGATGAAGGAGAAGAGAAAGAAAGTAG
ATGAAAAAGAAGAAAAAATGATGACGATGAAAAAGAAGAAGGATGCATAG
AAGAAGGATACATAGGACGAGAAGAAGAAGAAGTAGAGGAAGAAGAAGAG
GAGAAGGAGGAAGAAGAAGAAGAAAAAGAAGAAGAGGAAGAAGAGAAAAA
AGAAGAGAAGAAGAAGATGATGAAGAAGAAAAAGAAGAAGTAGAAGAATA
AGGACCGTTCGC back to topCoding sequence (CDS) from alignment at chr1:1609762..1613523- >NO01G05760.1 ID=NO01G05760.1|Name=NO01G05760.1|organism=Nannochloropsis oceanica|type=CDS|length=1608bp|location=Sequence derived from alignment at chr1:1609762..1613523- (Nannochloropsis oceanica) ATGACCACCTTCACTCCCTCTGACGCGCAGCATCAACTGCAGCAGCAGCA GGAAGAAGAACAGGATGGAGGCCAGGCGTCGTTTTTTGGCGTCATGTCGT ACCATTCCCAGACGGTGCAAGTCACGGGAGGGGAAGAGCGAGATGGAGAT GGCAAAGCTAGCGATGAAGACGACGAGAGTAAGATGTCTGCCTCCTCCTT GTCCTCGCAGTCTTTCCCTTCTCCGTCCTCCTCTGCGCTCTCGGCATTCA TGCACGACCATCAGTTGCAGCAGCAACAGCAGCGTCAGCAGCAGCAGCAG CAGCAGCAGCAGCAGCAGGGGGCAGAGGGCGACGCGTCCTCTTCCTCCAC CTCTACCCCCTCCGTCCCTCTTCCTCCCCTCCCAGGCACCGCAGCCACGG CCACCGTTCCCGTCCCCCTCAAGAAGAGAATGGACGAGAGCATAGGCGAC GAGTACCAGCGCATCGCGGCACAGAAGGCCCGGGGGGAACAGCGGCTGGC GGCCATGACCGCATCCAAGGAGCATGCACGCCGGAAGTTCCCACAGATGC GTCGTGTCTACACGGACTATCACTTGAAGGTGATGGTGGCCGGGGAGGCG GGCCATGGCAAGACCACCTTCATCAACAATATGTTTTCGTCCTATACGCA AGGGCGAGATGTGAAAGAGCCGCCTTTGCCTCATGACGGGAGCCGTACAA AGACGAGCGATTTCCTCGCGGACCCTTCGGGCCTGTGCACGCGCTTCACG GTCACGAACGAGGAGGCCTTGGAACGAGTGCATTACACCATCCAGGACAC GCCCGGTTTCGGAGACGACACAGATATCTGCCGGTCGATTGACATGATCC TGAACTACATCGATGACTGCAATCAGACCTACCTGGAGGCCGAGAATGAC ACATCGCGCATGCAACCCTTGGGACAGTGCCCTGGAGGCGACGCGCGCGT GGACGTGTGCTTGTACTTCTTGGCGGCCCATCGCCTCAAGTGGATCGATA TCAGGTTCATGCAGGCCATCTCGGCTAAGGTGGCGCTCATTCCCCTCCTG GCCAAGGCGGACAGCATGACAGCTGACGAGACCCTGGCCTTCCGGTCCTT AGTCCACAAGGAGTGCCTCAATCACAAGATCCGCCTCTTCGACTTCGGGC AGGAGGCGAAGCAGAGGGTGGGCATCCCTCCTGACCTGGTCGTGCCGCCC TTCGCCGTGGTGGCCTCCAATCAATTTGATGAGGTGAGGGGCAGTGGTTC CTTCTGGCCCGTGCGGGACTACCGTTGGGGCACCTGCGAGGCTTTCTCCA CCGAACACTCTGACTGCACCTACCTTAAGAAACTACTCCTCGAGGAGGGT TTTCACGACCTTCGGCAAGCGACGGACGAGCGGTACATGGTCTTTCGTCG TACCTTCTATCAGGCGGAGCGAGCAGCAGCAGCAGAAACAGCAGCCACGG ACAAGCGGCGACGACAGCAGTGGATGTTGGTGTCCGCTTGCCTCCTAGGC CTGTGGATCGTCTCCTCCCTTGTCCGGACCATCTCGGGGGGGGAGGAGGG AGGTGGGAAGGGAGGGCGGGAGGCGAAGGAGCCGTGGAAGGGATGCAGTG GAATGTGA back to top
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