|
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr1 | genome | chr1:853205..858068 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO01G03250.1 vs.
Match: EWM29284.1 (hypothetical protein Naga_100029g7 [Nannochloropsis gaditana]) HSP 1 Score: 1503.4 bits (3891), Expect = 0.000e+0 Identity = 865/1554 (55.66%), Postives = 1055/1554 (67.89%), Query Frame = 0
Query: 8 GMGWRTARLRLCQVCDDVLAAETARLRQKSWHL--AAKDALLSQGALFLCVVVLGIGHALGEHYHDYEGD-RIAKWVYRAVLLVNVFLNVWIVAARHVCQEREVLGSVRKTVGIYRKHVLTA-DNSTTSYGEQVAVLKQGSPMVSIYLVFREGKWERVPALLLVEDDIIALGTSDMTPARVEELDCEPGDDEGGVENGDEKSQDV----HHPYGGSPSQQLSPDQGASGAWLPAGAKVGFRPDRRISFLRKCTISPTSRRLLVLCGDMRTFRLRETPLQAFLEEMLRPLDDSQCPQHPSPDTLFAKDMRISRHAALFGILVLMGILLIAVSLRFVWQEQERLLWRHYLLEEPAYVAVLALPVARPTLSLLVEALSMARLLTVVERLQEQQREGTKTIPQKKGREDGSDGDLEPEQRIRLTSSRRDRISVRRFFRYFLLTLRARLMPPPLLPSTLRHESAKAHVAVEIEGHHSHREGKKAVPLPPSPQTRSPLLSIPLIRSRTVERLGSVTMLAVVDDELLVADAPSPEEVFLLNPKKAQEASASTVLQIMREPGSMSSHSPSSSSVAAAIMFESPTWTQHLPSLKPLGFSCLALAEMEGRQCTTQQQWAMLGSTAAATQTAATPVAALIDFVRNDSSSQSQAYLGQLARGIGFSAADDLRPYFCERGRLLVVAPHLVDARACEDVSASSLAETRARGTLQPHMTSVVWEDLRRRAATGTGV-----GDGNSGEMQLLSAGTPSLALPMCLEYFDGSVISHLTAEDRRLIVAAWNAWALEDYHVVCFSYTPIPPVLARRFARRHLSDPPFYLVDNYTEAQQLAHLDAIREQALQEREARMLARQTAATAEGHDGGMEQQAGSNREGTEEGVADAGKSAKATATVNVDPLERRKEDPPPSSFTRRGRLIHGQGYGQPSPSSSGFETPSSQGSSGSVRGEVNAGFLSGAVKSRLLASAQASTSMPDLLRRSTEP--ILGKATVRSFPMPAPSPSKNYIEENSGTYSDGGGMTGMVRHNQGHGQDDDMLWGLLRRQVFLGMVASSMLPRQEVPGLVEEMMASGVRFLFFSPRNMRRTKKLAEQMGIAMDWNAAVSLRPSVAQVPSSHLIVGRGDVYGDWATKSRLPHGTAAIREHLRNVDNVPLLVSLYTDATPPTINEMFVVFQEYHESVLCVGCGFRCTNTQLFRRADVAIAMGGVPGGLHLTGAVAPFATGAAAGL------LPRDIAFNEALVGLFCAFRLGAAADGTVASLAVLTDIVKESRRLLGCFYQCVSLGTTILITVALCVVLPHLFPLPVASTRGQWSLADTLWVLWVILPLLVLPLLVTPADAGLLGRCPRKNVFKPNEHNAFRSGRALVLRCLSTILLCLYVHARCLASLLLRLPDVVTACRLPAGRPPSIASATAEWWAVLACSEHFTLLRQGHGEVSACYWVAHDLLLVSLALCWTVQSSSFLHRTATLREESPLRNFAWVVGGVCLVVGQTLHFVIRGLNNVGSAGLGAIGWDVWLMVVGVAPWVGLASAEYAKRLDAEVWNRHARFRRLEFATRLGMHSPK 1541
G+ W TAR R+CQVCDD +AE RLRQ S + AKDALLSQGAL CV VL IG AL EH HD G+ +AKW+YR +L+VNV LNVWIVAAR +CQ+RE+LG VR++V YR+ VLTA D+ S A+LKQGSPM+SIY VFR+ +W+RVP LLLVE+DIIAL D TPA VEELD E E + S++V HHP+ S Q P+ LPAG+KVG RPDR+ SFLRK +SP S+RLLVLC DMR FRLR TP++AFLEEMLRP D + P PDTLFAKDMRISR AA +G+L LM ILL+A S+RF+WQEQE+ W H+LL EPA +A+LALPVARP LSLL EALS+ARLLTVVE L Q +G Q+KG ++ DLEPE+RIRL S+RRDR+ VRRF RY TLRARL+P PLL R +A+ HV V I G H +G K Q R LL IPLI+S+TVERLG+VTML V+DDELLV+D SPE VFLLN KK QE S STVLQ++REP ++ + FE P WTQHL SLKP+GF LAL E E R+ + + A G P AL+DFV D+ +AYL QLA GIGFSA+DDLRP+F RGRL VVA H V+ + ED ASSL ETR+RG LQP+MTS VWED+RRR TG +SG MQL S G P+ AL C++Y++G VIS+LT EDRRLI++ W AW L+ +HVVC SYTP+P FA+ + DPP YLVD+Y ++AH+DA++E+A+ E EA+M E D +E+ ++ E+ V DA + A+ P + E P S + G SP PSS+ G +++ +GA++ S SMPDLLR STEP + G + S + + I N+ GGG+ + ++D +LW LLRRQVFLG+VASS+LPR E+PG VEEMMASGVRFLFFSPRNMRR+KKLAEQMGI MDWNAA+SLRPSV VP SHLIVGRGDVYGDWA KSRLPHG AAIREHL VDNVPLLVS+YTDATPPTI+EMF+VFQ++HESVLCVGCGFR TN QLFRRADVAI++GG+PGGL + T + + P D AFNE++VGLF RL A +GT SLAVLT++VKESRRLLGCFYQC+SLGTTIL T AL ++LPHL P PV STRG+WSLADTLWVLW++LPLLVLPLLVTPADAGLL R PRKNV +P +H+ R+ RAL++RCL T+ LC+Y HARCL SLL++ DVV AC + S+++A A++ A+LAC E L R+GH EV+A Y VAHDLLL++LA QSS+FLH TA+LREESPLRN AW++GG CLV GQ HF++RGL V GL AIGWDVW++ + AP L +E K+ DA++ +HARFRRLEFATRLGMHSPK
Sbjct: 27 GLDWSTARQRICQVCDDATSAEILRLRQGSLNFIFVAKDALLSQGALLGCVTVLVIGEALEEHSHDDSGNGEVAKWIYRGILVVNVILNVWIVAARQICQQRELLGRVRESVETYRESVLTAADDEYASVRRHHAILKQGSPMLSIYPVFRDNQWQRVPGLLLVEEDIIALCAGDSTPAEVEELDLE------STEKREHHSRNVEEGPHHPFLASTPAQGKPEV------LPAGSKVGMRPDRQTSFLRKSALSPVSQRLLVLCRDMRCFRLRATPMKAFLEEMLRP-DRAGSP----PDTLFAKDMRISRSAAKYGVLALMLILLVAASVRFLWQEQEKTSWAHFLLVEPACLAILALPVARPALSLLAEALSIARLLTVVEDLHLAQWQGDWGA-QRKGE---AEADLEPERRIRLKSARRDRMPVRRFMRYASATLRARLLPVPLLQPPTRSAAAQ-HVPVTITGGH---QGAKL-------QRRRALLPIPLIQSKTVERLGAVTMLGVIDDELLVSDTSSPEAVFLLNSKKTQETSTSTVLQMVREPLLDPPPEILPATTLPTVKFEDPGWTQHLASLKPVGFCSLALVEAEARRGESLRDHARGGCPGLVD-----PGQALVDFVLEDAPCHRRAYLAQLAHGIGFSASDDLRPFFKGRGRLQVVASHRVEEQTSEDNRASSLEETRSRGMLQPYMTSAVWEDVRRRGGTGDEADFDASAVASSGGMQLFSEGAPTPALSRCVDYWNGKVISNLTTEDRRLIISTWKAWTLDGFHVVCLSYTPLPHHHRGLFAQGKVEDPPTYLVDDYHRPDEMAHVDAVQEEAMTESEAKMSPHGPTGVQE--DDEIEKDRPNS---WEDRVDDAARWAERAILSKTRPPQYTPESP--SEYI-------GASQNVQSP------LPSSKDQHGH---KIDRDTETGALRD----FPHVSISMPDLLRGSTEPTPLAGTENLSSANIKVSYGCASEIR-NASKRRKGGGVKAEATFDS-QAREDGLLWILLRRQVFLGLVASSVLPRNEMPGFVEEMMASGVRFLFFSPRNMRRSKKLAEQMGITMDWNAAISLRPSVVTVPKSHLIVGRGDVYGDWAIKSRLPHGCAAIREHLHKVDNVPLLVSVYTDATPPTIDEMFLVFQDHHESVLCVGCGFRSTNAQLFRRADVAISVGGLPGGLKGSPTACTSPTESPVDMSRKHVPAPCDAAFNESMVGLFTVLRLEATDNGTTVSLAVLTNVVKESRRLLGCFYQCISLGTTILCTSALLLILPHLLPFPVGSTRGRWSLADTLWVLWIVLPLLVLPLLVTPADAGLLERYPRKNVIRPFDHSILRTTRALLVRCLPTVALCMYAHARCLVSLLVQFSDVVNACHVKGAPHASVSTAWAQFGALLACQEQSALFREGHTEVTASYVVAHDLLLLALACSLFAQSSTFLHGTASLREESPLRNIAWIIGGTCLVAGQACHFIVRGLTLVKGKGLSAIGWDVWVVALIFAPLASLTLSEIIKKADAKILIKHARFRRLEFATRLGMHSPK 1514
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO01G03250.1 ID=NO01G03250.1|Name=NO01G03250.1|organism=Nannochloropsis oceanica|type=mRNA|length=4864bp ACAGGCCGTACGTTCGAGAATGCGTCAACCATTTCATTGGCTGCCGATGC AGTGGCTCATAATAACAGCTAAAAAGAGAGTACAAATACGTTCGAGTGGC AGCTGCAGCCGTAGTAGCAGCAGCAGTCGCCGCCGCCTTTGCGCACGATA AGCCAAGGGCAACCACAATACCACATGGTGGCATCCACTTGCACTGGCAT GGGCTGGCGGACGGCGCGTCTGCGGCTTTGCCAAGTGTGCGACGACGTGC TGGCTGCCGAGACCGCCCGGCTGCGCCAAAAGTCCTGGCATCTTGCTGCC AAGGATGCCTTGCTGTCGCAAGGGGCCTTGTTCCTGTGCGTGGTGGTGCT GGGGATCGGGCATGCGTTGGGCGAGCACTATCACGATTACGAGGGCGATC GGATCGCAAAGTGGGTCTACCGCGCCGTGCTCCTGGTCAATGTTTTCCTG AACGTGTGGATTGTCGCAGCCCGTCACGTATGTCAAGAGCGGGAGGTTTT GGGAAGCGTGCGCAAGACCGTGGGAATATACCGGAAGCACGTCCTGACGG CCGACAACAGCACCACAAGTTACGGAGAGCAGGTTGCCGTGTTGAAGCAA GGCTCGCCGATGGTGTCCATATATCTCGTTTTTCGGGAAGGCAAGTGGGA GCGGGTGCCCGCTTTGTTGCTTGTAGAGGACGATATAATTGCCTTGGGTA CGAGCGACATGACCCCCGCGCGAGTGGAGGAATTGGATTGTGAGCCCGGA GATGATGAGGGAGGGGTTGAGAATGGCGACGAGAAGTCGCAAGATGTCCA CCACCCATATGGTGGCAGTCCTTCGCAGCAGCTATCACCAGATCAAGGCG CCAGCGGTGCATGGTTGCCCGCGGGGGCTAAGGTAGGCTTCCGCCCTGAT CGTCGCATCTCTTTTTTGCGCAAGTGTACCATCTCGCCGACATCACGTCG ATTGCTTGTCTTGTGTGGGGATATGCGCACGTTCCGTTTGAGAGAGACGC CACTTCAAGCCTTCTTGGAGGAGATGCTCCGCCCTCTAGATGATAGCCAG TGCCCACAACACCCATCGCCCGACACATTGTTTGCCAAGGACATGCGAAT CTCCCGTCATGCTGCCTTGTTCGGGATCCTGGTCCTGATGGGCATTCTTC TAATTGCAGTTTCATTGCGTTTCGTGTGGCAAGAACAAGAGAGATTGTTG TGGCGGCACTATCTGTTGGAGGAGCCGGCATACGTGGCTGTGTTGGCGTT GCCCGTGGCGCGGCCCACATTGTCTCTCTTGGTTGAGGCTTTGAGTATGG CTAGACTGCTCACGGTGGTCGAGAGATTGCAAGAGCAGCAGCGCGAAGGG ACCAAGACGATTCCCCAAAAGAAAGGTCGTGAGGACGGGAGTGATGGAGA CTTGGAGCCCGAGCAGCGCATTCGTTTGACGTCCTCGCGTCGGGACCGCA TCTCCGTGCGTCGATTCTTCCGCTACTTTCTGTTGACGCTGCGTGCGCGC TTAATGCCACCTCCTCTTCTTCCCTCTACGCTTCGGCATGAATCTGCAAA GGCGCACGTGGCTGTGGAGATTGAGGGCCATCACAGCCATCGCGAGGGAA AGAAAGCAGTACCCCTCCCTCCTTCCCCGCAGACGAGAAGCCCACTTTTG TCCATCCCACTCATCCGAAGTCGGACCGTGGAGAGGCTGGGGTCTGTCAC CATGCTGGCGGTGGTGGACGACGAATTGTTGGTGGCCGATGCACCCTCCC CTGAAGAAGTGTTTCTCCTTAATCCAAAAAAGGCCCAAGAGGCATCTGCG TCTACGGTATTACAAATCATGCGCGAGCCCGGTTCCATGTCGTCTCATTC CCCTTCGTCTTCCTCAGTCGCTGCTGCCATCATGTTTGAAAGTCCTACAT GGACTCAACACCTGCCTTCCTTGAAGCCGTTAGGCTTCTCCTGTCTAGCC CTTGCAGAAATGGAGGGTCGGCAGTGTACCACCCAGCAGCAGTGGGCTAT GCTAGGTTCTACAGCAGCAGCCACACAAACAGCAGCGACACCAGTAGCAG CCCTGATTGATTTTGTCCGCAACGATTCGTCGAGCCAAAGCCAGGCGTAC CTAGGGCAGCTGGCAAGGGGCATTGGCTTCTCGGCTGCAGATGACCTGAG GCCTTATTTTTGCGAGCGAGGTCGCCTTTTGGTTGTCGCTCCACATTTGG TCGATGCCCGCGCTTGTGAAGATGTAAGTGCGTCTTCATTGGCAGAGACT CGGGCCCGCGGGACGCTACAGCCGCACATGACGTCTGTGGTGTGGGAGGA CTTGCGTCGGCGGGCCGCCACGGGTACTGGAGTTGGTGATGGCAACAGCG GAGAGATGCAGCTCTTGTCAGCAGGAACACCATCGTTGGCATTGCCGATG TGTTTGGAGTATTTTGATGGTAGCGTTATCTCTCATTTGACTGCGGAGGA TCGACGATTAATTGTTGCCGCGTGGAATGCGTGGGCCTTGGAGGATTACC ATGTCGTCTGCTTCTCCTATACACCCATTCCACCCGTACTTGCGCGTCGG TTCGCACGACGACATCTGAGCGACCCGCCTTTTTATCTCGTGGACAATTA CACAGAAGCCCAGCAGCTTGCCCACCTGGATGCCATCCGTGAACAAGCTT TGCAGGAACGTGAGGCAAGGATGCTGGCACGACAGACGGCGGCAACAGCG GAAGGACATGATGGTGGGATGGAACAGCAGGCAGGTAGTAATAGGGAAGG GACTGAAGAGGGGGTGGCAGACGCGGGAAAATCCGCAAAAGCCACGGCTA CAGTGAATGTTGACCCTTTGGAACGGAGAAAGGAGGATCCGCCGCCTTCA TCGTTCACCAGGAGGGGAAGGCTAATTCATGGTCAAGGCTATGGCCAGCC CTCTCCTTCCTCGTCAGGTTTCGAGACGCCTTCTAGTCAAGGCAGTTCTG GTAGCGTAAGGGGCGAAGTAAACGCTGGATTTTTGTCGGGGGCGGTAAAG AGCCGCTTATTAGCATCAGCACAAGCTAGCACGAGTATGCCGGACCTCCT TCGCAGAAGCACGGAGCCCATTCTTGGAAAGGCTACTGTGCGGAGCTTCC CAATGCCGGCGCCAAGCCCTAGTAAGAATTATATTGAGGAAAACAGTGGA ACTTACAGCGATGGAGGTGGGATGACTGGGATGGTCCGCCATAATCAAGG CCACGGCCAGGACGACGATATGCTTTGGGGCTTGCTGCGCCGACAGGTGT TCCTTGGGATGGTGGCATCAAGTATGCTGCCACGACAGGAGGTGCCGGGC CTGGTGGAGGAGATGATGGCCTCGGGCGTCCGCTTCCTTTTCTTTAGCCC TCGCAACATGCGTCGGACCAAAAAGCTGGCAGAGCAAATGGGGATAGCGA TGGATTGGAATGCTGCCGTTTCACTACGCCCCTCTGTCGCACAAGTGCCT TCCAGTCATTTGATCGTAGGACGTGGGGACGTATACGGTGATTGGGCGAC CAAAAGCCGCCTGCCTCATGGAACTGCGGCCATCCGCGAGCATCTGCGGA ATGTGGACAATGTTCCTCTGCTGGTGAGTCTATACACGGATGCAACGCCA CCAACTATAAATGAGATGTTTGTTGTCTTTCAGGAGTACCATGAGTCGGT GCTTTGTGTTGGGTGTGGGTTTCGATGCACCAATACGCAGCTTTTCCGAC GGGCGGACGTGGCCATTGCAATGGGAGGAGTGCCTGGTGGGTTGCACCTC ACTGGTGCTGTTGCTCCTTTTGCCACCGGAGCTGCCGCCGGCTTGTTGCC CAGGGACATTGCTTTCAATGAAGCGCTTGTAGGTTTATTTTGTGCATTCC GCTTAGGGGCTGCCGCCGATGGCACAGTAGCCTCGTTGGCCGTCTTGACG GATATTGTCAAGGAGAGCCGCCGCCTCCTTGGGTGTTTCTACCAGTGTGT GTCCCTCGGCACCACGATTCTGATCACCGTCGCATTGTGCGTGGTCTTGC CGCATCTCTTTCCGCTTCCTGTTGCCTCTACGCGTGGACAGTGGTCTTTA GCGGACACCCTTTGGGTACTGTGGGTAATTTTGCCTCTGCTTGTACTGCC TCTCCTCGTCACCCCCGCAGATGCAGGGCTCCTGGGAAGGTGCCCTCGCA AAAACGTCTTCAAACCAAATGAGCACAATGCCTTTCGGTCAGGCCGGGCA CTGGTGCTGCGTTGCCTGTCGACCATCCTTCTTTGCCTGTATGTCCACGC GCGGTGCCTGGCCTCGTTGCTCCTCCGCCTTCCCGATGTGGTCACTGCTT GCAGGCTACCCGCAGGCCGACCTCCGTCGATTGCATCAGCAACCGCAGAA TGGTGGGCCGTCCTAGCGTGCTCTGAGCACTTTACTCTTTTGCGGCAAGG CCATGGAGAGGTTTCTGCATGCTACTGGGTTGCGCACGACCTGCTGCTGG TCTCGCTGGCTTTGTGCTGGACCGTGCAGTCCTCGAGTTTTCTCCACCGG ACCGCCACCCTTCGAGAGGAATCACCGTTGCGGAATTTCGCGTGGGTTGT GGGTGGGGTGTGTTTAGTGGTAGGTCAAACTCTTCATTTTGTCATTCGCG GCCTGAACAACGTGGGCAGTGCAGGGCTTGGGGCCATCGGTTGGGACGTG TGGTTGATGGTTGTGGGGGTTGCTCCATGGGTAGGGTTAGCTTCGGCAGA GTATGCCAAGAGACTGGACGCCGAGGTTTGGAACAGGCATGCGCGATTCA GAAGGTTAGAGTTTGCGACGCGGCTTGGGATGCACTCGCCCAAGTAAAAA ATTAAAAGGAAAATAAAAGCAAATATTAAAAAAATGTGTCAAAACTGAAA ATGTGTACAACTAC back to topprotein sequence of NO01G03250.1 >NO01G03250.1-protein ID=NO01G03250.1-protein|Name=NO01G03250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1541bp MVASTCTGMGWRTARLRLCQVCDDVLAAETARLRQKSWHLAAKDALLSQG ALFLCVVVLGIGHALGEHYHDYEGDRIAKWVYRAVLLVNVFLNVWIVAAR HVCQEREVLGSVRKTVGIYRKHVLTADNSTTSYGEQVAVLKQGSPMVSIY LVFREGKWERVPALLLVEDDIIALGTSDMTPARVEELDCEPGDDEGGVEN GDEKSQDVHHPYGGSPSQQLSPDQGASGAWLPAGAKVGFRPDRRISFLRK CTISPTSRRLLVLCGDMRTFRLRETPLQAFLEEMLRPLDDSQCPQHPSPD TLFAKDMRISRHAALFGILVLMGILLIAVSLRFVWQEQERLLWRHYLLEE PAYVAVLALPVARPTLSLLVEALSMARLLTVVERLQEQQREGTKTIPQKK GREDGSDGDLEPEQRIRLTSSRRDRISVRRFFRYFLLTLRARLMPPPLLP STLRHESAKAHVAVEIEGHHSHREGKKAVPLPPSPQTRSPLLSIPLIRSR TVERLGSVTMLAVVDDELLVADAPSPEEVFLLNPKKAQEASASTVLQIMR EPGSMSSHSPSSSSVAAAIMFESPTWTQHLPSLKPLGFSCLALAEMEGRQ CTTQQQWAMLGSTAAATQTAATPVAALIDFVRNDSSSQSQAYLGQLARGI GFSAADDLRPYFCERGRLLVVAPHLVDARACEDVSASSLAETRARGTLQP HMTSVVWEDLRRRAATGTGVGDGNSGEMQLLSAGTPSLALPMCLEYFDGS VISHLTAEDRRLIVAAWNAWALEDYHVVCFSYTPIPPVLARRFARRHLSD PPFYLVDNYTEAQQLAHLDAIREQALQEREARMLARQTAATAEGHDGGME QQAGSNREGTEEGVADAGKSAKATATVNVDPLERRKEDPPPSSFTRRGRL IHGQGYGQPSPSSSGFETPSSQGSSGSVRGEVNAGFLSGAVKSRLLASAQ ASTSMPDLLRRSTEPILGKATVRSFPMPAPSPSKNYIEENSGTYSDGGGM TGMVRHNQGHGQDDDMLWGLLRRQVFLGMVASSMLPRQEVPGLVEEMMAS GVRFLFFSPRNMRRTKKLAEQMGIAMDWNAAVSLRPSVAQVPSSHLIVGR GDVYGDWATKSRLPHGTAAIREHLRNVDNVPLLVSLYTDATPPTINEMFV VFQEYHESVLCVGCGFRCTNTQLFRRADVAIAMGGVPGGLHLTGAVAPFA TGAAAGLLPRDIAFNEALVGLFCAFRLGAAADGTVASLAVLTDIVKESRR LLGCFYQCVSLGTTILITVALCVVLPHLFPLPVASTRGQWSLADTLWVLW VILPLLVLPLLVTPADAGLLGRCPRKNVFKPNEHNAFRSGRALVLRCLST ILLCLYVHARCLASLLLRLPDVVTACRLPAGRPPSIASATAEWWAVLACS EHFTLLRQGHGEVSACYWVAHDLLLVSLALCWTVQSSSFLHRTATLREES PLRNFAWVVGGVCLVVGQTLHFVIRGLNNVGSAGLGAIGWDVWLMVVGVA PWVGLASAEYAKRLDAEVWNRHARFRRLEFATRLGMHSPK* back to topmRNA from alignment at chr1:853205..858068+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO01G03250.1 ID=NO01G03250.1|Name=NO01G03250.1|organism=Nannochloropsis oceanica|type=mRNA|length=4864bp|location=Sequence derived from alignment at chr1:853205..858068+ (Nannochloropsis oceanica) ACAGGCCGTACGTTCGAGAATGCGTCAACCATTTCATTGGCTGCCGATGC
AGTGGCTCATAATAACAGCTAAAAAGAGAGTACAAATACGTTCGAGTGGC
AGCTGCAGCCGTAGTAGCAGCAGCAGTCGCCGCCGCCTTTGCGCACGATA
AGCCAAGGGCAACCACAATACCACATGGTGGCATCCACTTGCACTGGCAT
GGGCTGGCGGACGGCGCGTCTGCGGCTTTGCCAAGTGTGCGACGACGTGC
TGGCTGCCGAGACCGCCCGGCTGCGCCAAAAGTCCTGGCATCTTGCTGCC
AAGGATGCCTTGCTGTCGCAAGGGGCCTTGTTCCTGTGCGTGGTGGTGCT
GGGGATCGGGCATGCGTTGGGCGAGCACTATCACGATTACGAGGGCGATC
GGATCGCAAAGTGGGTCTACCGCGCCGTGCTCCTGGTCAATGTTTTCCTG
AACGTGTGGATTGTCGCAGCCCGTCACGTATGTCAAGAGCGGGAGGTTTT
GGGAAGCGTGCGCAAGACCGTGGGAATATACCGGAAGCACGTCCTGACGG
CCGACAACAGCACCACAAGTTACGGAGAGCAGGTTGCCGTGTTGAAGCAA
GGCTCGCCGATGGTGTCCATATATCTCGTTTTTCGGGAAGGCAAGTGGGA
GCGGGTGCCCGCTTTGTTGCTTGTAGAGGACGATATAATTGCCTTGGGTA
CGAGCGACATGACCCCCGCGCGAGTGGAGGAATTGGATTGTGAGCCCGGA
GATGATGAGGGAGGGGTTGAGAATGGCGACGAGAAGTCGCAAGATGTCCA
CCACCCATATGGTGGCAGTCCTTCGCAGCAGCTATCACCAGATCAAGGCG
CCAGCGGTGCATGGTTGCCCGCGGGGGCTAAGGTAGGCTTCCGCCCTGAT
CGTCGCATCTCTTTTTTGCGCAAGTGTACCATCTCGCCGACATCACGTCG
ATTGCTTGTCTTGTGTGGGGATATGCGCACGTTCCGTTTGAGAGAGACGC
CACTTCAAGCCTTCTTGGAGGAGATGCTCCGCCCTCTAGATGATAGCCAG
TGCCCACAACACCCATCGCCCGACACATTGTTTGCCAAGGACATGCGAAT
CTCCCGTCATGCTGCCTTGTTCGGGATCCTGGTCCTGATGGGCATTCTTC
TAATTGCAGTTTCATTGCGTTTCGTGTGGCAAGAACAAGAGAGATTGTTG
TGGCGGCACTATCTGTTGGAGGAGCCGGCATACGTGGCTGTGTTGGCGTT
GCCCGTGGCGCGGCCCACATTGTCTCTCTTGGTTGAGGCTTTGAGTATGG
CTAGACTGCTCACGGTGGTCGAGAGATTGCAAGAGCAGCAGCGCGAAGGG
ACCAAGACGATTCCCCAAAAGAAAGGTCGTGAGGACGGGAGTGATGGAGA
CTTGGAGCCCGAGCAGCGCATTCGTTTGACGTCCTCGCGTCGGGACCGCA
TCTCCGTGCGTCGATTCTTCCGCTACTTTCTGTTGACGCTGCGTGCGCGC
TTAATGCCACCTCCTCTTCTTCCCTCTACGCTTCGGCATGAATCTGCAAA
GGCGCACGTGGCTGTGGAGATTGAGGGCCATCACAGCCATCGCGAGGGAA
AGAAAGCAGTACCCCTCCCTCCTTCCCCGCAGACGAGAAGCCCACTTTTG
TCCATCCCACTCATCCGAAGTCGGACCGTGGAGAGGCTGGGGTCTGTCAC
CATGCTGGCGGTGGTGGACGACGAATTGTTGGTGGCCGATGCACCCTCCC
CTGAAGAAGTGTTTCTCCTTAATCCAAAAAAGGCCCAAGAGGCATCTGCG
TCTACGGTATTACAAATCATGCGCGAGCCCGGTTCCATGTCGTCTCATTC
CCCTTCGTCTTCCTCAGTCGCTGCTGCCATCATGTTTGAAAGTCCTACAT
GGACTCAACACCTGCCTTCCTTGAAGCCGTTAGGCTTCTCCTGTCTAGCC
CTTGCAGAAATGGAGGGTCGGCAGTGTACCACCCAGCAGCAGTGGGCTAT
GCTAGGTTCTACAGCAGCAGCCACACAAACAGCAGCGACACCAGTAGCAG
CCCTGATTGATTTTGTCCGCAACGATTCGTCGAGCCAAAGCCAGGCGTAC
CTAGGGCAGCTGGCAAGGGGCATTGGCTTCTCGGCTGCAGATGACCTGAG
GCCTTATTTTTGCGAGCGAGGTCGCCTTTTGGTTGTCGCTCCACATTTGG
TCGATGCCCGCGCTTGTGAAGATGTAAGTGCGTCTTCATTGGCAGAGACT
CGGGCCCGCGGGACGCTACAGCCGCACATGACGTCTGTGGTGTGGGAGGA
CTTGCGTCGGCGGGCCGCCACGGGTACTGGAGTTGGTGATGGCAACAGCG
GAGAGATGCAGCTCTTGTCAGCAGGAACACCATCGTTGGCATTGCCGATG
TGTTTGGAGTATTTTGATGGTAGCGTTATCTCTCATTTGACTGCGGAGGA
TCGACGATTAATTGTTGCCGCGTGGAATGCGTGGGCCTTGGAGGATTACC
ATGTCGTCTGCTTCTCCTATACACCCATTCCACCCGTACTTGCGCGTCGG
TTCGCACGACGACATCTGAGCGACCCGCCTTTTTATCTCGTGGACAATTA
CACAGAAGCCCAGCAGCTTGCCCACCTGGATGCCATCCGTGAACAAGCTT
TGCAGGAACGTGAGGCAAGGATGCTGGCACGACAGACGGCGGCAACAGCG
GAAGGACATGATGGTGGGATGGAACAGCAGGCAGGTAGTAATAGGGAAGG
GACTGAAGAGGGGGTGGCAGACGCGGGAAAATCCGCAAAAGCCACGGCTA
CAGTGAATGTTGACCCTTTGGAACGGAGAAAGGAGGATCCGCCGCCTTCA
TCGTTCACCAGGAGGGGAAGGCTAATTCATGGTCAAGGCTATGGCCAGCC
CTCTCCTTCCTCGTCAGGTTTCGAGACGCCTTCTAGTCAAGGCAGTTCTG
GTAGCGTAAGGGGCGAAGTAAACGCTGGATTTTTGTCGGGGGCGGTAAAG
AGCCGCTTATTAGCATCAGCACAAGCTAGCACGAGTATGCCGGACCTCCT
TCGCAGAAGCACGGAGCCCATTCTTGGAAAGGCTACTGTGCGGAGCTTCC
CAATGCCGGCGCCAAGCCCTAGTAAGAATTATATTGAGGAAAACAGTGGA
ACTTACAGCGATGGAGGTGGGATGACTGGGATGGTCCGCCATAATCAAGG
CCACGGCCAGGACGACGATATGCTTTGGGGCTTGCTGCGCCGACAGGTGT
TCCTTGGGATGGTGGCATCAAGTATGCTGCCACGACAGGAGGTGCCGGGC
CTGGTGGAGGAGATGATGGCCTCGGGCGTCCGCTTCCTTTTCTTTAGCCC
TCGCAACATGCGTCGGACCAAAAAGCTGGCAGAGCAAATGGGGATAGCGA
TGGATTGGAATGCTGCCGTTTCACTACGCCCCTCTGTCGCACAAGTGCCT
TCCAGTCATTTGATCGTAGGACGTGGGGACGTATACGGTGATTGGGCGAC
CAAAAGCCGCCTGCCTCATGGAACTGCGGCCATCCGCGAGCATCTGCGGA
ATGTGGACAATGTTCCTCTGCTGGTGAGTCTATACACGGATGCAACGCCA
CCAACTATAAATGAGATGTTTGTTGTCTTTCAGGAGTACCATGAGTCGGT
GCTTTGTGTTGGGTGTGGGTTTCGATGCACCAATACGCAGCTTTTCCGAC
GGGCGGACGTGGCCATTGCAATGGGAGGAGTGCCTGGTGGGTTGCACCTC
ACTGGTGCTGTTGCTCCTTTTGCCACCGGAGCTGCCGCCGGCTTGTTGCC
CAGGGACATTGCTTTCAATGAAGCGCTTGTAGGTTTATTTTGTGCATTCC
GCTTAGGGGCTGCCGCCGATGGCACAGTAGCCTCGTTGGCCGTCTTGACG
GATATTGTCAAGGAGAGCCGCCGCCTCCTTGGGTGTTTCTACCAGTGTGT
GTCCCTCGGCACCACGATTCTGATCACCGTCGCATTGTGCGTGGTCTTGC
CGCATCTCTTTCCGCTTCCTGTTGCCTCTACGCGTGGACAGTGGTCTTTA
GCGGACACCCTTTGGGTACTGTGGGTAATTTTGCCTCTGCTTGTACTGCC
TCTCCTCGTCACCCCCGCAGATGCAGGGCTCCTGGGAAGGTGCCCTCGCA
AAAACGTCTTCAAACCAAATGAGCACAATGCCTTTCGGTCAGGCCGGGCA
CTGGTGCTGCGTTGCCTGTCGACCATCCTTCTTTGCCTGTATGTCCACGC
GCGGTGCCTGGCCTCGTTGCTCCTCCGCCTTCCCGATGTGGTCACTGCTT
GCAGGCTACCCGCAGGCCGACCTCCGTCGATTGCATCAGCAACCGCAGAA
TGGTGGGCCGTCCTAGCGTGCTCTGAGCACTTTACTCTTTTGCGGCAAGG
CCATGGAGAGGTTTCTGCATGCTACTGGGTTGCGCACGACCTGCTGCTGG
TCTCGCTGGCTTTGTGCTGGACCGTGCAGTCCTCGAGTTTTCTCCACCGG
ACCGCCACCCTTCGAGAGGAATCACCGTTGCGGAATTTCGCGTGGGTTGT
GGGTGGGGTGTGTTTAGTGGTAGGTCAAACTCTTCATTTTGTCATTCGCG
GCCTGAACAACGTGGGCAGTGCAGGGCTTGGGGCCATCGGTTGGGACGTG
TGGTTGATGGTTGTGGGGGTTGCTCCATGGGTAGGGTTAGCTTCGGCAGA
GTATGCCAAGAGACTGGACGCCGAGGTTTGGAACAGGCATGCGCGATTCA
GAAGGTTAGAGTTTGCGACGCGGCTTGGGATGCACTCGCCCAAGTAAAAA
ATTAAAAGGAAAATAAAAGCAAATATTAAAAAAATGTGTCAAAACTGAAA
ATGTGTACAACTAC back to topCoding sequence (CDS) from alignment at chr1:853205..858068+ >NO01G03250.1 ID=NO01G03250.1|Name=NO01G03250.1|organism=Nannochloropsis oceanica|type=CDS|length=4623bp|location=Sequence derived from alignment at chr1:853205..858068+ (Nannochloropsis oceanica) ATGGTGGCATCCACTTGCACTGGCATGGGCTGGCGGACGGCGCGTCTGCG GCTTTGCCAAGTGTGCGACGACGTGCTGGCTGCCGAGACCGCCCGGCTGC GCCAAAAGTCCTGGCATCTTGCTGCCAAGGATGCCTTGCTGTCGCAAGGG GCCTTGTTCCTGTGCGTGGTGGTGCTGGGGATCGGGCATGCGTTGGGCGA GCACTATCACGATTACGAGGGCGATCGGATCGCAAAGTGGGTCTACCGCG CCGTGCTCCTGGTCAATGTTTTCCTGAACGTGTGGATTGTCGCAGCCCGT CACGTATGTCAAGAGCGGGAGGTTTTGGGAAGCGTGCGCAAGACCGTGGG AATATACCGGAAGCACGTCCTGACGGCCGACAACAGCACCACAAGTTACG GAGAGCAGGTTGCCGTGTTGAAGCAAGGCTCGCCGATGGTGTCCATATAT CTCGTTTTTCGGGAAGGCAAGTGGGAGCGGGTGCCCGCTTTGTTGCTTGT AGAGGACGATATAATTGCCTTGGGTACGAGCGACATGACCCCCGCGCGAG TGGAGGAATTGGATTGTGAGCCCGGAGATGATGAGGGAGGGGTTGAGAAT GGCGACGAGAAGTCGCAAGATGTCCACCACCCATATGGTGGCAGTCCTTC GCAGCAGCTATCACCAGATCAAGGCGCCAGCGGTGCATGGTTGCCCGCGG GGGCTAAGGTAGGCTTCCGCCCTGATCGTCGCATCTCTTTTTTGCGCAAG TGTACCATCTCGCCGACATCACGTCGATTGCTTGTCTTGTGTGGGGATAT GCGCACGTTCCGTTTGAGAGAGACGCCACTTCAAGCCTTCTTGGAGGAGA TGCTCCGCCCTCTAGATGATAGCCAGTGCCCACAACACCCATCGCCCGAC ACATTGTTTGCCAAGGACATGCGAATCTCCCGTCATGCTGCCTTGTTCGG GATCCTGGTCCTGATGGGCATTCTTCTAATTGCAGTTTCATTGCGTTTCG TGTGGCAAGAACAAGAGAGATTGTTGTGGCGGCACTATCTGTTGGAGGAG CCGGCATACGTGGCTGTGTTGGCGTTGCCCGTGGCGCGGCCCACATTGTC TCTCTTGGTTGAGGCTTTGAGTATGGCTAGACTGCTCACGGTGGTCGAGA GATTGCAAGAGCAGCAGCGCGAAGGGACCAAGACGATTCCCCAAAAGAAA GGTCGTGAGGACGGGAGTGATGGAGACTTGGAGCCCGAGCAGCGCATTCG TTTGACGTCCTCGCGTCGGGACCGCATCTCCGTGCGTCGATTCTTCCGCT ACTTTCTGTTGACGCTGCGTGCGCGCTTAATGCCACCTCCTCTTCTTCCC TCTACGCTTCGGCATGAATCTGCAAAGGCGCACGTGGCTGTGGAGATTGA GGGCCATCACAGCCATCGCGAGGGAAAGAAAGCAGTACCCCTCCCTCCTT CCCCGCAGACGAGAAGCCCACTTTTGTCCATCCCACTCATCCGAAGTCGG ACCGTGGAGAGGCTGGGGTCTGTCACCATGCTGGCGGTGGTGGACGACGA ATTGTTGGTGGCCGATGCACCCTCCCCTGAAGAAGTGTTTCTCCTTAATC CAAAAAAGGCCCAAGAGGCATCTGCGTCTACGGTATTACAAATCATGCGC GAGCCCGGTTCCATGTCGTCTCATTCCCCTTCGTCTTCCTCAGTCGCTGC TGCCATCATGTTTGAAAGTCCTACATGGACTCAACACCTGCCTTCCTTGA AGCCGTTAGGCTTCTCCTGTCTAGCCCTTGCAGAAATGGAGGGTCGGCAG TGTACCACCCAGCAGCAGTGGGCTATGCTAGGTTCTACAGCAGCAGCCAC ACAAACAGCAGCGACACCAGTAGCAGCCCTGATTGATTTTGTCCGCAACG ATTCGTCGAGCCAAAGCCAGGCGTACCTAGGGCAGCTGGCAAGGGGCATT GGCTTCTCGGCTGCAGATGACCTGAGGCCTTATTTTTGCGAGCGAGGTCG CCTTTTGGTTGTCGCTCCACATTTGGTCGATGCCCGCGCTTGTGAAGATG TAAGTGCGTCTTCATTGGCAGAGACTCGGGCCCGCGGGACGCTACAGCCG CACATGACGTCTGTGGTGTGGGAGGACTTGCGTCGGCGGGCCGCCACGGG TACTGGAGTTGGTGATGGCAACAGCGGAGAGATGCAGCTCTTGTCAGCAG GAACACCATCGTTGGCATTGCCGATGTGTTTGGAGTATTTTGATGGTAGC GTTATCTCTCATTTGACTGCGGAGGATCGACGATTAATTGTTGCCGCGTG GAATGCGTGGGCCTTGGAGGATTACCATGTCGTCTGCTTCTCCTATACAC CCATTCCACCCGTACTTGCGCGTCGGTTCGCACGACGACATCTGAGCGAC CCGCCTTTTTATCTCGTGGACAATTACACAGAAGCCCAGCAGCTTGCCCA CCTGGATGCCATCCGTGAACAAGCTTTGCAGGAACGTGAGGCAAGGATGC TGGCACGACAGACGGCGGCAACAGCGGAAGGACATGATGGTGGGATGGAA CAGCAGGCAGGTAGTAATAGGGAAGGGACTGAAGAGGGGGTGGCAGACGC GGGAAAATCCGCAAAAGCCACGGCTACAGTGAATGTTGACCCTTTGGAAC GGAGAAAGGAGGATCCGCCGCCTTCATCGTTCACCAGGAGGGGAAGGCTA ATTCATGGTCAAGGCTATGGCCAGCCCTCTCCTTCCTCGTCAGGTTTCGA GACGCCTTCTAGTCAAGGCAGTTCTGGTAGCGTAAGGGGCGAAGTAAACG CTGGATTTTTGTCGGGGGCGGTAAAGAGCCGCTTATTAGCATCAGCACAA GCTAGCACGAGTATGCCGGACCTCCTTCGCAGAAGCACGGAGCCCATTCT TGGAAAGGCTACTGTGCGGAGCTTCCCAATGCCGGCGCCAAGCCCTAGTA AGAATTATATTGAGGAAAACAGTGGAACTTACAGCGATGGAGGTGGGATG ACTGGGATGGTCCGCCATAATCAAGGCCACGGCCAGGACGACGATATGCT TTGGGGCTTGCTGCGCCGACAGGTGTTCCTTGGGATGGTGGCATCAAGTA TGCTGCCACGACAGGAGGTGCCGGGCCTGGTGGAGGAGATGATGGCCTCG GGCGTCCGCTTCCTTTTCTTTAGCCCTCGCAACATGCGTCGGACCAAAAA GCTGGCAGAGCAAATGGGGATAGCGATGGATTGGAATGCTGCCGTTTCAC TACGCCCCTCTGTCGCACAAGTGCCTTCCAGTCATTTGATCGTAGGACGT GGGGACGTATACGGTGATTGGGCGACCAAAAGCCGCCTGCCTCATGGAAC TGCGGCCATCCGCGAGCATCTGCGGAATGTGGACAATGTTCCTCTGCTGG TGAGTCTATACACGGATGCAACGCCACCAACTATAAATGAGATGTTTGTT GTCTTTCAGGAGTACCATGAGTCGGTGCTTTGTGTTGGGTGTGGGTTTCG ATGCACCAATACGCAGCTTTTCCGACGGGCGGACGTGGCCATTGCAATGG GAGGAGTGCCTGGTGGGTTGCACCTCACTGGTGCTGTTGCTCCTTTTGCC ACCGGAGCTGCCGCCGGCTTGTTGCCCAGGGACATTGCTTTCAATGAAGC GCTTGTAGGTTTATTTTGTGCATTCCGCTTAGGGGCTGCCGCCGATGGCA CAGTAGCCTCGTTGGCCGTCTTGACGGATATTGTCAAGGAGAGCCGCCGC CTCCTTGGGTGTTTCTACCAGTGTGTGTCCCTCGGCACCACGATTCTGAT CACCGTCGCATTGTGCGTGGTCTTGCCGCATCTCTTTCCGCTTCCTGTTG CCTCTACGCGTGGACAGTGGTCTTTAGCGGACACCCTTTGGGTACTGTGG GTAATTTTGCCTCTGCTTGTACTGCCTCTCCTCGTCACCCCCGCAGATGC AGGGCTCCTGGGAAGGTGCCCTCGCAAAAACGTCTTCAAACCAAATGAGC ACAATGCCTTTCGGTCAGGCCGGGCACTGGTGCTGCGTTGCCTGTCGACC ATCCTTCTTTGCCTGTATGTCCACGCGCGGTGCCTGGCCTCGTTGCTCCT CCGCCTTCCCGATGTGGTCACTGCTTGCAGGCTACCCGCAGGCCGACCTC CGTCGATTGCATCAGCAACCGCAGAATGGTGGGCCGTCCTAGCGTGCTCT GAGCACTTTACTCTTTTGCGGCAAGGCCATGGAGAGGTTTCTGCATGCTA CTGGGTTGCGCACGACCTGCTGCTGGTCTCGCTGGCTTTGTGCTGGACCG TGCAGTCCTCGAGTTTTCTCCACCGGACCGCCACCCTTCGAGAGGAATCA CCGTTGCGGAATTTCGCGTGGGTTGTGGGTGGGGTGTGTTTAGTGGTAGG TCAAACTCTTCATTTTGTCATTCGCGGCCTGAACAACGTGGGCAGTGCAG GGCTTGGGGCCATCGGTTGGGACGTGTGGTTGATGGTTGTGGGGGTTGCT CCATGGGTAGGGTTAGCTTCGGCAGAGTATGCCAAGAGACTGGACGCCGA GGTTTGGAACAGGCATGCGCGATTCAGAAGGTTAGAGTTTGCGACGCGGC TTGGGATGCACTCGCCCAAGTAA back to top
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