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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr1 | genome | chr1:682533..684872 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO01G02640.2 vs.
Match: EWM29191.1 (l-asparaginase i [Nannochloropsis gaditana]) HSP 1 Score: 511.5 bits (1316), Expect = 2.100e-141 Identity = 253/310 (81.61%), Postives = 275/310 (88.71%), Query Frame = 0
Query: 22 MLTQIGEGKKAKKVLVIVTGGTLIMKPSGTGGTLDVCPGFLSELLALPEWRHENLPDIDVLEWDHLTDSACMGPEHWIKIAEEIESAYFRYEGFVVVHGTDTLAYSASALAFMFENLGKPVVFTGSQIPLAEVYSDARNNLVSSLLFACRQDFQEVCIVFGSRLLRGCRTTKVHSFDLQAFASPNFPPLATLGVNLEFASNISLPPPRKPLRVHKDMDANLVVVRLVPGFEDDALFAMINHSRHLHGIILLLYGTGNGDTSSRSGLLEAVTLAAQKGILVVVLTQCFQGGVLLDKYSVGVALCAAGVVSG 332
M ++G KAKKVLVIVTGGTLIMKP+ G LDVCPGFLSELLA EWRH NLP+IDVLEW LTDSACMGPEHWIKIA +IE AYF Y+GFVVVHGTDTLAYSASALAFM E+LGKPV+FTGSQIPLAEVY+DARNNLV+SLLFACRQDF EVCI FG+RLLRGCR TK+ SFDLQAFASPNFPPLAT+GVNLE +S+ SL PPRK +RVHK MD+NL+V+RLVPGFEDD+L AM+ HS LHGIILLLYGTGNGDTSSRSGLLEAV LA KGILVVVLTQCFQGGVLL+KYSVGVAL AAGVVSG
Sbjct: 1 MHARLGHDNKAKKVLVIVTGGTLIMKPNAGDGALDVCPGFLSELLASSEWRHRNLPEIDVLEWTILTDSACMGPEHWIKIATDIEKAYFEYDGFVVVHGTDTLAYSASALAFMLEDLGKPVIFTGSQIPLAEVYTDARNNLVTSLLFACRQDFHEVCIFFGNRLLRGCRATKIDSFDLQAFASPNFPPLATVGVNLEISSHFSL-PPRKTMRVHKKMDSNLIVIRLVPGFEDDSLIAMVIHSTQLHGIILLLYGTGNGDTSSRSGLLEAVKLATSKGILVVVLTQCFQGGVLLEKYSVGVALRAAGVVSG 309
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO01G02640.2 ID=NO01G02640.2|Name=NO01G02640.2|organism=Nannochloropsis oceanica|type=mRNA|length=2195bp TCGGAGCTTGCTATTTACCCCTGTGTTATTGAATGGTATGGTATGTGGGA TGTGATGGCGTGCATCTCCAGTATGAATAGAATATTGTGCATCTGCTCTG GACAGGGCAAGTAAGGCAAGAGCTACGTCGCTCGTCTGCAGGGTGTGTCC GGACGGAAAGGCGTTACCAGTTCAGATATGGAAAAGTTGCCTGGGTGCAT TGCCTGCGTTGTGGAGGGCTCTTGGGGGAATTTCGTGTATCTCTGCATTA AAACCTCAAAGCTTGTCGTCCCGAGAGCAGTGCTATTTTCCCTCGTACCC GACGATTTTGAATTACCCGCGTCGTGCACGGAACGATCATGATGACATCT CAAATTCGCGGCCTTCGCGCTCGCTGACTCCATCATCGCCAACCGTTGCC CTGATACCACTTGTTCACAACGCTTACAGAGCGTGGTAACGAGCTTGGTT GGGTCGGGCTTGCTGCAGGCAAAAAAGGCAAGGGCTTCACTAGGGGCTTC GTGTGCATCTCGCGCCAAAATCATGGCAGGCTTCTCTATTCAGTATCTGC AGTGCAGATTCTGCACGCACGTCAAACTCTCAAGCCTTTCTTCAAAACAA ACATAATAGTGTAGATAGTACACATAAGGCCATTTAATCCTGCTGGCACG TTAAGCCAAGCGGGTCTTTAACGCATGCCCCACCCTACACCTGCTGCTAA AACAACACTGGTCGCCCTTACTCAGGACAGTCCAAGAATGCTCACGCAAA TTGGGGAGGGCAAAAAAGCCAAAAAAGTCCTGGTCATCGTAACAGGCGGG ACGCTAATCATGAAGCCCAGCGGCACAGGAGGTACATTGGATGTTTGCCC GGGATTTCTCTCGGAGCTCTTGGCTTTGCCGGAATGGCGGCATGAGAATC TACCCGATATAGACGTTTTGGAATGGGATCACCTCACCGATAGTGCCTGT ATGGGGCCGGAGCATTGGATCAAGATTGCGGAGGAAATTGAGAGTGCCTA TTTTCGGTACGAAGGCTTCGTAGTCGTGCACGGTACAGACACACTTGCCT ACTCGGCGAGTGCATTGGCCTTCATGTTTGAGAACCTTGGAAAGCCAGTC GTGTTCACCGGGAGTCAAATTCCGCTGGCTGAGGTGTACTCAGACGCGCG AAACAATCTTGTGAGCTCGCTGCTCTTTGCATGCCGACAAGATTTTCAGG AAGTGTGCATTGTTTTCGGTTCCCGGCTGTTACGGGGCTGTCGGACCACC AAGGTTCACTCTTTTGACTTGCAAGCCTTTGCCTCGCCCAACTTTCCCCC CTTGGCCACCCTCGGCGTCAACTTGGAGTTTGCATCAAATATTTCGCTTC CACCACCGCGCAAGCCATTGCGGGTACACAAAGATATGGATGCCAATTTG GTCGTTGTGCGGCTCGTGCCGGGCTTTGAGGACGACGCGTTATTTGCCAT GATCAACCACAGCCGGCACTTGCATGGGATTATTCTGCTTTTATACGGTA CGGGCAACGGCGACACATCCAGTCGCTCGGGTTTGCTGGAGGCTGTTACG CTTGCCGCGCAAAAGGGTATACTTGTGGTCGTCCTAACTCAATGCTTCCA AGGTGGAGTCTTGCTTGACAAGTACAGTGTGGGGGTGGCTTTGTGCGCCG CTGGGGTTGTCAGTGGTACGTTGGGATTGAGGGGAAGGAGGAAGGGACTT AAGCTATATGCTTCTCTAATTGTCTTCTACCGTACTCAGTAGTTCCTCCC TTCCCTTCCTCCATCAGGCCATGACATGACAGTCGAGGCCTGCGTCACGA AGATTTCTTATCTCTTTTCTCGGACGGGCGGGGACATCGATAAGGTGAAG AGCCTGCTTAGTGTCGACTTGCGCGGTGAGCTTTCGAATGATTCCCGTTA TCGCAGTGCCATCAAGGATGTGGTACCGCTGGCCAAGCTGTAAAGCAAAA AGTAATATCATGACATACATGCTTTTCGTGGCGTTGTCGTTATCTCATGT CCATGCCGTTCAGCCCCCAAAAAACATAGTGTCTGGGGACGGAGGAAAGT CAATGGGTGCAAATCGAGGGATTCTCAGACACGAAAAATCTTGGGATATT TTTGTACATCAGGGTAATTGAGATGAGAGTTTATGTCTGTGTACATTATT ATTCCTCTGTATGATGAAAGTAAACAAGCAGAGTACGCGTGCACA back to topprotein sequence of NO01G02640.2 >NO01G02640.2-protein ID=NO01G02640.2-protein|Name=NO01G02640.2|organism=Nannochloropsis oceanica|type=polypeptide|length=356bp MPHPTPAAKTTLVALTQDSPRMLTQIGEGKKAKKVLVIVTGGTLIMKPSG TGGTLDVCPGFLSELLALPEWRHENLPDIDVLEWDHLTDSACMGPEHWIK IAEEIESAYFRYEGFVVVHGTDTLAYSASALAFMFENLGKPVVFTGSQIP LAEVYSDARNNLVSSLLFACRQDFQEVCIVFGSRLLRGCRTTKVHSFDLQ AFASPNFPPLATLGVNLEFASNISLPPPRKPLRVHKDMDANLVVVRLVPG FEDDALFAMINHSRHLHGIILLLYGTGNGDTSSRSGLLEAVTLAAQKGIL VVVLTQCFQGGVLLDKYSVGVALCAAGVVSGTLGLRGRRKGLKLYASLIV FYRTQ* back to topmRNA from alignment at chr1:682533..684872+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO01G02640.2 ID=NO01G02640.2|Name=NO01G02640.2|organism=Nannochloropsis oceanica|type=mRNA|length=2340bp|location=Sequence derived from alignment at chr1:682533..684872+ (Nannochloropsis oceanica) TCGGAGCTTGCTATTTACCCCTGTGTTATTGAATGGTATGGTATGTGGGA
TGTGATGGCGTGCATCTCCAGTATGAATAGAATATTGTGCATCTGCTCTG
GACAGGGCAAGTAAGGCAAGAGCTACGTCGCTCGTCTGCAGGGTGTGTCC
GGACGGAAAGGCGTTACCAGTTCAGATATGGAAAAGTTGCCTGGGTGCAT
TGCCTGCGTTGTGGAGGGCTCTTGGGGGAATTTCGTGTATCTCTGCATTA
AAACCTCAAAGCTTGTCGTCCCGAGAGCAGTGCTATTTTCCCTCGTACCC
GACGATTTTGAATTACCCGCGTCGTGCACGGAACGATCATGATGACATCT
CAAATTCGCGGCCTTCGCGCTCGCTGACTCCATCATCGCCAACCGTTGCC
CTGATACCACTTGTTCACAACGCTTACAGAGCGTGGTAACGAGCTTGGTT
GGGTCGGGCTTGCTGCAGGCAAAAAAGGCAAGGGCTTCACTAGGGGCTTC
GTGTGCATCTCGCGCCAAAATCATGGCAGGCTTCTCTATTCAGTATCTGC
AGTGCAGATTCTGCACGCACGTCAAACTCTCAAGCCTTTCTTCAAAACAA
ACATAATAGTGTAGATAGTACACATAAGGCCATTTAATCCTGCTGGCACG
TTAAGCCAAGCGGGTCTTTAACGCATGCCCCACCCTACACCTGCTGCTAA
AACAACACTGGTCGCCCTTACTCAGGACAGTCCAAGAATGCTCACGCAAA
TTGGGGAGGGCAAAAAAGCCAAAAAAGTCCTGGTCATCGTAACAGGCGGG
ACGCTAATCATGAAGCCCAGCGGCACAGGAGGTACATTGGATGTTTGCCC
GGGATTTCTCTCGGAGCTCTTGGCTTTGCCGGAATGGCGGCATGAGAATC
TACCCGATATAGACGTTTTGGAATGGGATCACCTCACCGATAGTGCCTGT
ATGGGGCCGGAGCATTGGATCAAGATTGCGGAGGAAATTGAGAGTGCCTA
TTTTCGGTACGAAGGCTTCGTAGTCGTGCACGGTACAGACACACTTGCCT
ACTCGGCGAGTGCATTGGCCTTCATGTTTGAGAACCTTGGAAAGCCAGTC
GTGTTCACCGGGAGTCAAATTCCGCTGGCTGAGGTGTACTCAGACGCGCG
AAACAATCTTGTGAGCTCGCTGCTCTTTGCATGCCGACAAGATTTTCAGG
AAGTGTGCATTGTTTTCGGTTCCCGGCTGTTACGGGGCTGTCGGACCACC
AAGGTTCACTCTTTTGACTTGCAAGCCTTTGCCTCGCCCAACTTTCCCCC
CTTGGCCACCCTCGGCGTCAACTTGGAGTTTGCATCAAATATTTCGCTTC
CACCACCGCGCAAGCCATTGCGGGTACACAAAGATATGGATGCCAATTTG
GTCGTTGTGCGGCTCGTGCCGGGCTTTGAGGACGACGCGTTATTTGCCAT
GATCAACCACAGCCGGCACTTGCATGGGATTATTCTGCTTTTATACGGTA
CGCAGGAAAGAAAGTTTTAAGCCATATGACGTTTGAATTGGAGGACGAGC
CGTCATAAGTATAGTAATTTGTTTTTTCCACCTCCTGTTCGCTCGAGCTC
CTTGCGCCGTCCGTCTCACCCTCCTCCGATTCGTTGCCCTAGGTACGGGC
AACGGCGACACATCCAGTCGCTCGGGTTTGCTGGAGGCTGTTACGCTTGC
CGCGCAAAAGGGTATACTTGTGGTCGTCCTAACTCAATGCTTCCAAGGTG
GAGTCTTGCTTGACAAGTACAGTGTGGGGGTGGCTTTGTGCGCCGCTGGG
GTTGTCAGTGGTACGTTGGGATTGAGGGGAAGGAGGAAGGGACTTAAGCT
ATATGCTTCTCTAATTGTCTTCTACCGTACTCAGTAGTTCCTCCCTTCCC
TTCCTCCATCAGGCCATGACATGACAGTCGAGGCCTGCGTCACGAAGATT
TCTTATCTCTTTTCTCGGACGGGCGGGGACATCGATAAGGTGAAGAGCCT
GCTTAGTGTCGACTTGCGCGGTGAGCTTTCGAATGATTCCCGTTATCGCA
GTGCCATCAAGGATGTGGTACCGCTGGCCAAGCTGTAAAGCAAAAAGTAA
TATCATGACATACATGCTTTTCGTGGCGTTGTCGTTATCTCATGTCCATG
CCGTTCAGCCCCCAAAAAACATAGTGTCTGGGGACGGAGGAAAGTCAATG
GGTGCAAATCGAGGGATTCTCAGACACGAAAAATCTTGGGATATTTTTGT
ACATCAGGGTAATTGAGATGAGAGTTTATGTCTGTGTACATTATTATTCC
TCTGTATGATGAAAGTAAACAAGCAGAGTACGCGTGCACA back to topCoding sequence (CDS) from alignment at chr1:682533..684872+ >NO01G02640.2 ID=NO01G02640.2|Name=NO01G02640.2|organism=Nannochloropsis oceanica|type=CDS|length=1068bp|location=Sequence derived from alignment at chr1:682533..684872+ (Nannochloropsis oceanica) ATGCCCCACCCTACACCTGCTGCTAAAACAACACTGGTCGCCCTTACTCA GGACAGTCCAAGAATGCTCACGCAAATTGGGGAGGGCAAAAAAGCCAAAA AAGTCCTGGTCATCGTAACAGGCGGGACGCTAATCATGAAGCCCAGCGGC ACAGGAGGTACATTGGATGTTTGCCCGGGATTTCTCTCGGAGCTCTTGGC TTTGCCGGAATGGCGGCATGAGAATCTACCCGATATAGACGTTTTGGAAT GGGATCACCTCACCGATAGTGCCTGTATGGGGCCGGAGCATTGGATCAAG ATTGCGGAGGAAATTGAGAGTGCCTATTTTCGGTACGAAGGCTTCGTAGT CGTGCACGGTACAGACACACTTGCCTACTCGGCGAGTGCATTGGCCTTCA TGTTTGAGAACCTTGGAAAGCCAGTCGTGTTCACCGGGAGTCAAATTCCG CTGGCTGAGGTGTACTCAGACGCGCGAAACAATCTTGTGAGCTCGCTGCT CTTTGCATGCCGACAAGATTTTCAGGAAGTGTGCATTGTTTTCGGTTCCC GGCTGTTACGGGGCTGTCGGACCACCAAGGTTCACTCTTTTGACTTGCAA GCCTTTGCCTCGCCCAACTTTCCCCCCTTGGCCACCCTCGGCGTCAACTT GGAGTTTGCATCAAATATTTCGCTTCCACCACCGCGCAAGCCATTGCGGG TACACAAAGATATGGATGCCAATTTGGTCGTTGTGCGGCTCGTGCCGGGC TTTGAGGACGACGCGTTATTTGCCATGATCAACCACAGCCGGCACTTGCA TGGGATTATTCTGCTTTTATACGGTACGGGCAACGGCGACACATCCAGTC GCTCGGGTTTGCTGGAGGCTGTTACGCTTGCCGCGCAAAAGGGTATACTT GTGGTCGTCCTAACTCAATGCTTCCAAGGTGGAGTCTTGCTTGACAAGTA CAGTGTGGGGGTGGCTTTGTGCGCCGCTGGGGTTGTCAGTGGTACGTTGG GATTGAGGGGAAGGAGGAAGGGACTTAAGCTATATGCTTCTCTAATTGTC TTCTACCGTACTCAGTAG back to top
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