NO01G02170.1, NO01G02170.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G02170.1
Unique Name	NO01G02170.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4902
Alignment location	chr1:547744..553281 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:547744..553281 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO01G02170.1 vs.
Match: EWM29196.1 (mitogen-activated protein kinase [Nannochloropsis gaditana])

HSP 1 Score: 820.5 bits (2118), Expect = 2.800e-234
Identity = 401/488 (82.17%), Postives = 436/488 (89.34%), Query Frame = 0

Query:    1 MALVEGFLLKKSYISYRVRYFQLEGSNLLYKASKEDMKERNYMTLTGESQVTEFRAKRAFQVTTGNKTWFVKAVDEDKEENLTNWVAAIRGTIARLKQETSLPQASQLPEFIHHSVGGRDFVVDSRYTDLKHLGSGAYGMVVSAFDTQTGQKIAIKRCANLFVDPIDARKIGREIRIMSQLAHPNIIKIVDVLPPQTADFDDVYMVGELMDVDLHRAIYYGRPLSAEHVQFFLYQLLCGIKYIHSVGIVHRDLKPSNILVNSNCDLKITDFGLARRITDQTRDLTEYVVTRWYRAPEVMLSSCQYNKSVDIWSAGCIFAEMLQRKPLFPGDNYRHVLRLITKVTGSVSEADLWFVSNANAKAYMLQRLPAYRKIDFRNHLSGASASACELLSKMLEFNFVNRISVDEALAHPYFADIRDPTWEIEAGSDVLEWGDIDTVEPARLAMQRIIMEDGARLNIRNAEVLKEIQRKIQELSREAGTTTGMRAA 489
            MA +EG LLKKSYISYR RYF+L+GSNLLYK SKED KER+ M+LTG+SQ+ EFRAKRAFQ+TTG KTWF+K  D+DK+E L NWV+AI+G IA LKQ T  P  ++  E  HHS+ GRDFV+DSRYT+LK LGSGAYGMVVSA DTQTG++IAIK+CANLFVDP+DARKIGRE+RIMSQLAHPNIIKIVDVLPP TADFDDVYMVGELMDVDLHRAIYYGRPLS EHVQFFLYQ+LCGIKYIHSVGIVHRDLKPSNILVNSNCDLKITDFGLARRITDQTRDLTEYVVTRWYRAPEVMLSSCQYNKSVD+WSAGCIFAEMLQRKPLFPGDNYRHVLRLITKVTGS +EADLWFVSNANAKAYMLQRLP Y+++D R  L  ASA AC LLS+MLEFNF NRIS+DEALAHPYFA+IRDPTWE+EAG D LEWGDIDTVEP RLAMQRIIMEDGARLN  N  +L+EIQRK   LS   G TTGMRAA
Sbjct:    1 MARIEGVLLKKSYISYRPRYFELDGSNLLYKTSKEDAKERSLMSLTGDSQLIEFRAKRAFQITTGTKTWFIKIADDDKDEILFNWVSAIQGAIAHLKQGTLSPPIARSLELKHHSIAGRDFVMDSRYTELKQLGSGAYGMVVSALDTQTGKRIAIKKCANLFVDPVDARKIGREVRIMSQLAHPNIIKIVDVLPPTTADFDDVYMVGELMDVDLHRAIYYGRPLSPEHVQFFLYQILCGIKYIHSVGIVHRDLKPSNILVNSNCDLKITDFGLARRITDQTRDLTEYVVTRWYRAPEVMLSSCQYNKSVDVWSAGCIFAEMLQRKPLFPGDNYRHVLRLITKVTGSATEADLWFVSNANAKAYMLQRLPTYQRMDLRALLPNASADACTLLSRMLEFNFANRISIDEALAHPYFAEIRDPTWEMEAGPDALEWGDIDTVEPTRLAMQRIIMEDGARLNSANLSILEEIQRKCHGLS--GGATTGMRAA 486

The following BLAST results are available for this feature:

BLAST of NO01G02170.1 vs.

BLAST of NO01G02170.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM29196.1	2.800e-234	82.17	mitogen-activated protein kinase [Nannochloropsis ...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO01G02170	NO01G02170	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO01G02170.1	NO01G02170.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO01G02170.1.cds1	NO01G02170.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G02170.1.cds2	NO01G02170.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G02170.1.cds3	NO01G02170.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G02170.1.cds4	NO01G02170.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr1:547744..553281+
coding sequence from alignment at chr1:547744..553281+

mRNA sequence

>NO01G02170.1 ID=NO01G02170.1|Name=NO01G02170.1|organism=Nannochloropsis oceanica|type=mRNA|length=4902bp
ATTCCAAGTGATTTGAATTACTTTTTATCCCTTTTGAAGGCATGTTATAC
TGCATATACATATTCTGAATTTGACCAGTCATCTTTCCTCCCCGCTCACC
CCTATCCGTCCACTTCTACATGGTGCTTTGCGCCGAGGAGGCAGACGGAA
CATGCTGAAGCAAACCCTGCCTTATCAATCCTTCCACGTCCGCGCGACGC
AAGAAATGGTTCGTACCCTTCTTCAAATTGACGGGCCCTTGGTCGGTCAT
AACTTCGCCGCAGTCTGCCAGCACGCGCACTTCGATGCACATTTCCTTGG
GCGGCTGAGGAGGGGGAGGTTGAAGGATGACGGGAAATGAGATTTCTGAC
AAAGCAATAATGAAATTATTGAAGATTTACGAAATATATACTTTCCGTCT
CCACCTTTTTACGTACGTACCAAGATAGAGCCCGTAAGATCGAGCAAAGG
GTAATGGCCCATGTATTCAGACAGGAGCTTGTCGTAAGAGGCAAAGAACT
CGGTTTCTTTCGCAGACAGCTTCCGTTGCAGGTGCGTGGGAATCACAGCT
CCACCCGTATCCCATCTCAATTCCCGCACCTTGTCTAAGCGATGCTAGTG
TGGTGGGGTATGGAAGGGAAGGGCGTAATGGAGGTACGAGGGGACGGAAA
AAAGGGGAGTGGATAACATTATATACAAATGTATGCATCCGCAGTTATTT
CTCTTTTTTCTCAATTAAGATACCATAGCATTTAGAAATGTTGTAACAAT
AATCGTGCCGCACTGGTTGGCCTTCTTGTACACGAAATTTGCGCGTGTGT
CTGCCTGCACTCTGAAACAGAATTATAATGGTTGTTTCTCGTGTGTGTCA
TTCCCTTCCCAACGGAGAAAACCAGCATATCTTCCGAACACCCAAGTTCA
TCCAACTATACAAACCCCAACTATCTCTTACTTCCCACTATCCTCCTTTT
GTACCTGCATGTAGGCCAAGAGACAGCGCTTGTTCCGTAGAATGTTTTGC
AGGTGCACCGACAACGCCACCAAATACTCAGGGGGCACCTCCGTCTGTGA
CGATTGGTATGGATATGAATCAAATTAAAAGTATACACACTTGAATCGTT
CGTGAAGTGGCGGGCCAGAGAAAGAGCTGCCCACGTTATTACAGGTCAAC
CCCATCCATCTGGTACGCTCTGCGCCCATACACATTCTTTTGGCATGATC
CGGGCGACTGATGAAGGCAGCAGCCGACCTTGTCCATACCCATTTCCCGC
CATCATCGCACACTGAGATGTGCCCGGATACATTCTCCATCATATCCCAC
CGGCATTCACTCACCATTTCCTGCGCCAAGGCTGGTCGGATCTGCGCCAT
GTGCCCCTGGCATTCCAGCAGGCACCGGCTCACGGCATCCTCGCTGTACA
ATGGCAACCAGTCACTCCGCTTCAATTCTTGCAAGAGCTCGCGGCCCTTT
TGTCCAAAGTTCATGGATCCTTTTGTTTTGTTATAATTTGTTTTGTCGGG
AGTGAAGTGGTGCAGGCGCGCGGCGAAGAAGACGAGGGAACAACGAGGCG
GGAGGGAGATAACGTTCTGTGGGGTTTGGGACGAGAGGAATGGGCTACAG
TAAGTGACGTTCGAGACATGAGGCTAATTTAGCTAGGAAACACCACGAAA
GGTGGGCACACACAGAATAAAGGAAGCAGGTGGGAGTCGGAGCGTCGAAT
TGCGCGAGGAGGGCGGGAGGGTATTTGGGTCAAGCCTTGAATCAGAATTT
AAATGATCGAACGTCATGCGCGTTGACGTCTGGCCCTGTGTCGCGCATCC
CTCGCCCGCGTTTACCTGCTGCTTGAGACTGTTTCTCAGCGGCGCGGCCC
AAAGACCGGTACCATCTTACGGCTTGTTGGCAAGTACGCTGGAAGCAGGT
TGGCGGCACGCCAAAGCATGCAAGCGCATCGATGTGTGACTGCCTCTTTC
CCAGAGCTGCGTTGAGTCCCTGGCATTCGCCACCCTTGAAAGCTTCGATA
TTCATGACCGCTCCCCCCATAATACTGTCATTTCAAGGTGCATGTTAATG
CCTTCGCATTCATACCCTTGCCTTGGAATGATGCATACTCGCTCTCATAG
CAAATACGCATTGCCGCGACAAGCAGCCACTCCTCTCTCACTCCAAAGCG
GGCCTCGCTCCCCGTCTTTTTTGCCAAGCCCGAAGTTCGACTGTTTCTCG
CGACAAATGCATCTAATTAAAGATGTGGCACGGATGATAGTACAGGTCAC
TGAAAGTTGTCATCGAACCAGACTATTGAGCCAACGATTGATTTCATACC
CCACATACACACGCACAGGGCTTCTCGTCCCCCTTGGTCTCCTTCTTCAA
GTCCTAGGAGTGCCACGGCGGCTCCGCCCACACAACGGTGTTCGACTAAT
CTGGCAGATTTCTGTAAGGTCGTCTACCTTCACAAGCCTCGTCTCTCTCT
CCTCCCTTCCCACCGATCGAGATGGCCCTCGTCGAGGGTTTTTTGCTCAA
AAAGTCCTATATTTCCTACCGGGTCCGGTATTTCCAGCTGGAAGGGTCCA
ATCTGTTGTACAAAGCGTCCAAGGAAGATATGAAGGAAAGGAATTATATG
ACCTTGACGGGGGAGAGTCAGGTGACAGAGTTCAGGGCGAAACGAGCCTT
TCAAGTCACCACAGGGAACAAGACATGGTTCGTCAAGGCCGTCGACGAAG
ACAAGGAGGAGAATCTGACCAACTGGGTGGCGGCCATCCGCGGGACCATC
GCCCGGCTTAAGCAAGAGACGAGCTTACCTCAGGCGTCACAGCTGCCAGA
ATTTATACACCATTCTGTTGGGGGTCGGGATTTTGTGGTCGATTCGCGGT
ATACTGATCTCAAGCATCTCGGCAGTGGAGCCTACGGTATGGTCGTCTCC
GCCTTCGACACGCAAACTGGCCAAAAAATCGCCATTAAAAGATGCGCCAA
CCTCTTCGTTGACCCCATTGATGCCCGAAAAATCGGGCGAGAAATTCGGA
TCATGTCTCAACTCGCCCACCCCAACATCATCAAGATCGTGGATGTCCTA
CCTCCTCAAACGGCGGATTTCGACGACGTGTACATGGTCGGTGAATTGAT
GGATGTGGACCTGCACAGAGCGATTTACTATGGCCGGCCCTTGTCAGCGG
AGCATGTGCAGTTTTTCCTGTATCAACTTCTGTGTGGAATCAAGTACATT
CATTCTGTTGGGATCGTGCATCGGGATTTGAAGCCCTCCAACATCCTCGT
CAACTCCAACTGTGACCTAAAAATAACCGACTTCGGGCTTGCGCGTCGTA
TCACGGACCAAACCCGAGACCTGACCGAGTACGTCGTCACCCGGTGGTAT
CGTGCGCCGGAAGTCATGCTTTCTTCTTGTCAGTACAACAAGAGCGTGGA
TATTTGGTCGGCCGGATGTATTTTCGCCGAGATGTTACAACGGAAACCTC
TCTTTCCCGGCGATAACTATCGACATGTCCTGCGTTTGATCACCAAGGTG
ACAGGCTCGGTCTCGGAGGCAGATCTGTGGTTTGTAAGCAATGCGAATGC
CAAGGCCTACATGCTCCAGCGTTTGCCTGCGTATCGTAAGATAGACTTTC
GCAATCACTTGTCGGGGGCCTCAGCGTCTGCATGCGAGTTGCTCTCCAAG
ATGCTAGAGTTCAATTTCGTGAATCGAATATCTGTGGATGAGGCGTTAGC
ACATCCATATTTTGCTGACATTCGGGATCCGACTTGGGAGATTGAGGCGG
GGTCAGACGTGTTGGAGTGGGGGGATATCGACACGGTGGAGCCCGCGCGC
CTAGCGATGCAGCGGATTATCATGGAGGATGGCGCCAGGTTGAATATAAG
GAATGCCGAGGTGCTAAAGGAGATCCAGAGAAAGATCCAGGAGTTGAGTA
GGGAGGCGGGGACAACGACGGGGATGAGGGCGGCTTGACGCTGGAGGAAG
AAGAGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGAAGAACAA
GCTTGCTTCCTTGTCAGTGGTGCTGGGAAGGAAAGAAGGCAACAATGACT
TGTAAAAATCCATGATAAATATGAAGATATGAAACGAATGAAAGGCAGGC
AAACAAGAGGTAGTGACAAATTGTTGGATAGGAAGAAATGTAATTTGAAA
TGAGGAGGAGGGAAGATGCGTATGAGATTCATATGATCTTTTGAGAGAAA
GGAACCATAGACCCTCATATTTCAGTGAAAGTAATGAGACAGCAAGGTAA
CGACAAGCGATAATGGCAAGATGCCCTGCCGTGTGAGACATAGAATTCAA
ACAAAAGGAAGGGATGCACAGTGCGTGCATGTACATAACAAAAGAACAAG
TGAACGGTGTGACGAGTTCAAAATAAATTTAACAGGACATGGCTCATCTG
CGCCTCCCTCGTGCTCATAGAGAATGGGTCTTCGCTTGTTCGTGGTGCTG
CATATTCTGCTACGTTTGTGGTGTTGCGGGAGTAGAAATGATAACGGAAG
TATGTTAAGGCGAAGGCGATGGGACTGTGCGAAGGCAGAGCCTATCGAGG
CATGTGCCTTTTGATGAACCTGTGCCCCATTACCAGCGGCTTAATTCCAT
AATGCTTCTTCCACATGCGGCATGGCAAGGTGATGGTGCTGATACAAGAA
CAACACGGCGCCCATTGACGTAGCCTGGCCCCGTCCCCTTCAATCAGCTT
CATTTGGCTATGAGTGTGTATTTTCTTAGTCAGATAAGTGAAATGAGTGG
GATGGAGATGTGCGGGCTTGCCAAGGGTACCACACGTGATGAGAGCTAGA
GATATAGAGGGGCTCGATGCTTGGCCCATAAAAAATAAATTTTGTTTTTT
CCGTTTCGCGATTATGATGCCCGTCCCCAATTTGTGCGCCTCGTTTCACT
CA

protein sequence of NO01G02170.1

>NO01G02170.1-protein ID=NO01G02170.1-protein|Name=NO01G02170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=489bp
MALVEGFLLKKSYISYRVRYFQLEGSNLLYKASKEDMKERNYMTLTGESQ
VTEFRAKRAFQVTTGNKTWFVKAVDEDKEENLTNWVAAIRGTIARLKQET
SLPQASQLPEFIHHSVGGRDFVVDSRYTDLKHLGSGAYGMVVSAFDTQTG
QKIAIKRCANLFVDPIDARKIGREIRIMSQLAHPNIIKIVDVLPPQTADF
DDVYMVGELMDVDLHRAIYYGRPLSAEHVQFFLYQLLCGIKYIHSVGIVH
RDLKPSNILVNSNCDLKITDFGLARRITDQTRDLTEYVVTRWYRAPEVML
SSCQYNKSVDIWSAGCIFAEMLQRKPLFPGDNYRHVLRLITKVTGSVSEA
DLWFVSNANAKAYMLQRLPAYRKIDFRNHLSGASASACELLSKMLEFNFV
NRISVDEALAHPYFADIRDPTWEIEAGSDVLEWGDIDTVEPARLAMQRII
MEDGARLNIRNAEVLKEIQRKIQELSREAGTTTGMRAA*

mRNA from alignment at chr1:547744..553281+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO01G02170.1 ID=NO01G02170.1|Name=NO01G02170.1|organism=Nannochloropsis oceanica|type=mRNA|length=5538bp|location=Sequence derived from alignment at chr1:547744..553281+ (Nannochloropsis oceanica)
ATTCCAAGTGATTTGAATTACTTTTTATCCCTTTTGAAGGCATGTTATAC
TGCATATACATATTCTGAATTTGACCAGTCATCTTTCCTCCCCGCTCACC
CCTATCCGTCCACTTCTACATGGTGCTTTGCGCCGAGGAGGCAGACGGAA
CATGCTGAAGCAAACCCTGCCTTATCAATCCTTCCACGTCCGCGCGACGC
AAGAAATGGTTCGTACCCTTCTTCAAATTGACGGGCCCTTGGTCGGTCAT
AACTTCGCCGCAGTCTGCCAGCACGCGCACTTCGATGCACATTTCCTTGG
GCGGCTGAGGAGGGGGAGGTTGAAGGATGACGGGAAATGAGATTTCTGAC
AAAGCAATAATGAAATTATTGAAGATTTACGAAATATATACTTTCCGTCT
CCACCTTTTTACGTACGTACCAAGATAGAGCCCGTAAGATCGAGCAAAGG
GTAATGGCCCATGTATTCAGACAGGAGCTTGTCGTAAGAGGCAAAGAACT
CGGTTTCTTTCGCAGACAGCTTCCGTTGCAGGTGCGTGGGAATCACAGCT
CCACCCGTATCCCATCTCAATTCCCGCACCTTGTCTAAGCGATGCTAGTG
TGGTGGGGTATGGAAGGGAAGGGCGTAATGGAGGTACGAGGGGACGGAAA
AAAGGGGAGTGGATAACATTATATACAAATGTATGCATCCGCAGTTATTT
CTCTTTTTTCTCAATTAAGATACCATAGCATTTAGAAATGTTGTAACAAT
AATCGTGCCGCACTGGTTGGCCTTCTTGTACACGAAATTTGCGCGTGTGT
CTGCCTGCACTCTGAAACAGAATTATAATGGTTGTTTCTCGTGTGTGTCA
TTCCCTTCCCAACGGAGAAAACCAGCATATCTTCCGAACACCCAAGTTCA
TCCAACTATACAAACCCCAACTATCTCTTACTTCCCACTATCCTCCTTTT
GTACCTGCATGTAGGCCAAGAGACAGCGCTTGTTCCGTAGAATGTTTTGC
AGGTGCACCGACAACGCCACCAAATACTCAGGGGGCACCTCCGTCTGTGA
CGATTGGTATGGATATGAATCAAATTAAAAGTATACACACTTGAATCGTT
CGTGAAGTGGCGGGCCAGAGAAAGAGCTGCCCACGTTATTACAGGTCAAC
CCCATCCATCTGGTACGCTCTGCGCCCATACACATTCTTTTGGCATGATC
CGGGCGACTGATGAAGGCAGCAGCCGACCTTGTCCATACCCATTTCCCGC
CATCATCGCACACTGAGATGTGCCCGGATACATTCTCCATCATATCCCAC
CGGCATTCACTCACCATTTCCTGCGCCAAGGCTGGTCGGATCTGCGCCAT
GTGCCCCTGGCATTCCAGCAGGCACCGGCTCACGGCATCCTCGCTGTACA
ATGGCAACCAGTCACTCCGCTTCAATTCTTGCAAGAGCTCGCGGCCCTTT
TGTCCAAAGTTCATGGATCCTTTTGTTTTGTTATAATTTGTTTTGTCGGG
AGTGAAGTGGTGCAGGCGCGCGGCGAAGAAGACGAGGGAACAACGAGGCG
GGAGGGAGATAACGTTCTGTGGGGTTTGGGACGAGAGGAATGGGCTACAG
TAAGTGACGTTCGAGACATGAGGCTAATTTAGCTAGGAAACACCACGAAA
GGTGGGCACACACAGAATAAAGGAAGCAGGTGGGAGTCGGAGCGTCGAAT
TGCGCGAGGAGGGCGGGAGGGTATTTGGGTCAAGCCTTGAATCAGAATTT
AAATGATCGAACGTCATGCGCGTTGACGTCTGGCCCTGTGTCGCGCATCC
CTCGCCCGCGTTTACCTGCTGCTTGAGACTGTTTCTCAGCGGCGCGGCCC
AAAGACCGGTACCATCTTACGGCTTGTTGGCAAGTACGCTGGAAGCAGGT
TGGCGGCACGCCAAAGCATGCAAGCGCATCGATGTGTGACTGCCTCTTTC
CCAGAGCTGCGTTGAGTCCCTGGCATTCGCCACCCTTGAAAGCTTCGATA
TTCATGACCGCTCCCCCCATAATACTGTCATTTCAAGGTGCATGTTAATG
CCTTCGCATTCATACCCTTGCCTTGGAATGATGCATACTCGCTCTCATAG
CAAATACGCATTGCCGCGACAAGCAGCCACTCCTCTCTCACTCCAAAGCG
GGCCTCGCTCCCCGTCTTTTTTGCCAAGCCCGAAGTTCGACTGTTTCTCG
CGACAAATGCATCTAATTAAAGATGTGGCACGGATGATAGTACAGGTCAC
TGAAAGTTGTCATCGAACCAGACTATTGAGCCAACGATTGATTTCATACC
CCACATACACACGCACAGGGCTTCTCGTCCCCCTTGGTCTCCTTCTTCAA
GTCCTAGGAGTGCCACGGCGGCTCCGCCCACACAACGGTGTTCGACTAAT
CTGGCAGATTTCTGTAAGGTCGTCTACCTTCACAAGCCTCGTCTCTCTCT
CCTCCCTTCCCACCGATCGAGATGGCCCTCGTCGAGGGTTTTTTGCTCAA
AAAGTCCTATATTTCCTACCGGGTCCGGTATTTCCAGCTGGAAGGGTCCA
ATCTGTTGTACAAAGCGTCCAAGGAAGATATGAAGGAAAGGAATTATATG
ACCTTGACGGGGGAGAGTCAGGTGACAGAGTTCAGGGCGAAACGAGGTGA
GTGATTGCTCCTCCTTGACAGACAGGGAGGGACGGAAGGATAAAGAGCGG
CGTTGGAGACACGCAAATGCATGATTTAAGCTGCCTTCGTCCAAGCAGCT
GGATTTAAAAAAGGGAAGAGACAAACAGACTGAATGTGGACTGAAGATGC
ATGCCTACTGATTCACTGGCGAGAAGAATACTGCACCCTTTTCCCACTTC
TCACAGTTCTGCACGTGACAAACAAATCCACAGACACCTCTTCTCTCAAA
ACCCGTCGAAGCGTACTCACATGTCCGATATAATCGACTCTCCCATTTCC
CTTGCCCCGCACCCAGCCTTTCAAGTCACCACAGGGAACAAGACATGGTT
CGTCAAGGCCGTCGACGAAGACAAGGAGGAGAATCTGACCAACTGGGTGG
CGGCCATCCGCGGGACCATCGCCCGGCTTAAGCAAGAGACGAGCTTACCT
CAGGCGTCACAGCTGCCAGAATTTATACACCATTCTGTTGGGGGTCGGGA
TTTTGTGGTCGATTCGCGGTATACTGATCTCAAGTACGTTTTATTTGTTT
TTTTTAGAGGGGAGGGACGTGTTGCTGCTTGGGACGCCAATTTCGTGCTA
TTCATTGTTCTGCTGTGCCGGGGTAAATATCTTCAATTGTGGCCGCAACG
AAATGAAGCAGATATATCCAAGTCCCTTATCTTTCCCTCCCTCCCACCCT
CCTTCTCATCCTTTCTTTCCTCATTCCCAACCCTTCAGGCATCTCGGCAG
TGGAGCCTACGGTATGGTCGTCTCCGCCTTCGACACGCAAACTGGCCAAA
AAATCGCCATTAAAAGATGCGCCAACCTCTTCGTTGACCCCATTGATGCC
CGAAAAATCGGGCGAGAAATTCGGATCATGTCTCAACTCGCCCACCCCAA
CATCATCAAGATCGTGGATGTCCTACCTCCTCAAACGGCGGATTTCGACG
ACGTGTACATGGTCGGTGAATTGATGGATGTGGACCTGCACAGAGCGATT
TACTATGGCCGGCCCTTGTCAGCGGAGCATGTGCAGTTTTTCCTGTATCA
ACTTCTGTGTGGAATCAAGTACATTCATTCTGTTGGGATCGTGCATCGGG
ATTTGAAGGTAGGAATGCCTCTCTCTCCTCCCTTTCTCTTTCCCCGCTAT
GTGGGTGCACCGAAAAATATTTGATTGCTTCTTTCCTCTTTCCCTCTACT
CCCTCCTGCCTCCCTTTAGCCCTCCAACATCCTCGTCAACTCCAACTGTG
ACCTAAAAATAACCGACTTCGGGCTTGCGCGTCGTATCACGGACCAAACC
CGAGACCTGACCGAGTACGTCGTCACCCGGTGGTATCGTGCGCCGGAAGT
CATGCTTTCTTCTTGTCAGTACAACAAGAGCGTGGATATTTGGTCGGCCG
GATGTATTTTCGCCGAGATGTTACAACGGAAACCTCTCTTTCCCGGCGAT
AACTATCGACATGTCCTGCGTTTGATCACCAAGGTGACAGGCTCGGTCTC
GGAGGCAGATCTGTGGTTTGTAAGCAATGCGAATGCCAAGGCCTACATGC
TCCAGCGTTTGCCTGCGTATCGTAAGATAGACTTTCGCAATCACTTGTCG
GGGGCCTCAGCGTCTGCATGCGAGTTGCTCTCCAAGATGCTAGAGTTCAA
TTTCGTGAATCGAATATCTGTGGATGAGGCGTTAGCACATCCATATTTTG
CTGACATTCGGGATCCGACTTGGGAGATTGAGGCGGGGTCAGACGTGTTG
GAGTGGGGGGATATCGACACGGTGGAGCCCGCGCGCCTAGCGATGCAGCG
GATTATCATGGAGGATGGCGCCAGGTTGAATATAAGGAATGCCGAGGTGC
TAAAGGAGATCCAGAGAAAGATCCAGGAGTTGAGTAGGGAGGCGGGGACA
ACGACGGGGATGAGGGCGGCTTGACGCTGGAGGAAGAAGAGGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGAAGGAGAAGAACAAGCTTGCTTCCTTGT
CAGTGGTGCTGGGAAGGAAAGAAGGCAACAATGACTTGTAAAAATCCATG
ATAAATATGAAGATATGAAACGAATGAAAGGCAGGCAAACAAGAGGTAGT
GACAAATTGTTGGATAGGAAGAAATGTAATTTGAAATGAGGAGGAGGGAA
GATGCGTATGAGATTCATATGATCTTTTGAGAGAAAGGAACCATAGACCC
TCATATTTCAGTGAAAGTAATGAGACAGCAAGGTAACGACAAGCGATAAT
GGCAAGATGCCCTGCCGTGTGAGACATAGAATTCAAACAAAAGGAAGGGA
TGCACAGTGCGTGCATGTACATAACAAAAGAACAAGTGAACGGTGTGACG
AGTTCAAAATAAATTTAACAGGACATGGCTCATCTGCGCCTCCCTCGTGC
TCATAGAGAATGGGTCTTCGCTTGTTCGTGGTGCTGCATATTCTGCTACG
TTTGTGGTGTTGCGGGAGTAGAAATGATAACGGAAGTATGTTAAGGCGAA
GGCGATGGGACTGTGCGAAGGCAGAGCCTATCGAGGCATGTGCCTTTTGA
TGAACCTGTGCCCCATTACCAGCGGCTTAATTCCATAATGCTTCTTCCAC
ATGCGGCATGGCAAGGTGATGGTGCTGATACAAGAACAACACGGCGCCCA
TTGACGTAGCCTGGCCCCGTCCCCTTCAATCAGCTTCATTTGGCTATGAG
TGTGTATTTTCTTAGTCAGATAAGTGAAATGAGTGGGATGGAGATGTGCG
GGCTTGCCAAGGGTACCACACGTGATGAGAGCTAGAGATATAGAGGGGCT
CGATGCTTGGCCCATAAAAAATAAATTTTGTTTTTTCCGTTTCGCGATTA
TGATGCCCGTCCCCAATTTGTGCGCCTCGTTTCACTCA

Coding sequence (CDS) from alignment at chr1:547744..553281+

>NO01G02170.1 ID=NO01G02170.1|Name=NO01G02170.1|organism=Nannochloropsis oceanica|type=CDS|length=1467bp|location=Sequence derived from alignment at chr1:547744..553281+ (Nannochloropsis oceanica)
ATGGCCCTCGTCGAGGGTTTTTTGCTCAAAAAGTCCTATATTTCCTACCG
GGTCCGGTATTTCCAGCTGGAAGGGTCCAATCTGTTGTACAAAGCGTCCA
AGGAAGATATGAAGGAAAGGAATTATATGACCTTGACGGGGGAGAGTCAG
GTGACAGAGTTCAGGGCGAAACGAGCCTTTCAAGTCACCACAGGGAACAA
GACATGGTTCGTCAAGGCCGTCGACGAAGACAAGGAGGAGAATCTGACCA
ACTGGGTGGCGGCCATCCGCGGGACCATCGCCCGGCTTAAGCAAGAGACG
AGCTTACCTCAGGCGTCACAGCTGCCAGAATTTATACACCATTCTGTTGG
GGGTCGGGATTTTGTGGTCGATTCGCGGTATACTGATCTCAAGCATCTCG
GCAGTGGAGCCTACGGTATGGTCGTCTCCGCCTTCGACACGCAAACTGGC
CAAAAAATCGCCATTAAAAGATGCGCCAACCTCTTCGTTGACCCCATTGA
TGCCCGAAAAATCGGGCGAGAAATTCGGATCATGTCTCAACTCGCCCACC
CCAACATCATCAAGATCGTGGATGTCCTACCTCCTCAAACGGCGGATTTC
GACGACGTGTACATGGTCGGTGAATTGATGGATGTGGACCTGCACAGAGC
GATTTACTATGGCCGGCCCTTGTCAGCGGAGCATGTGCAGTTTTTCCTGT
ATCAACTTCTGTGTGGAATCAAGTACATTCATTCTGTTGGGATCGTGCAT
CGGGATTTGAAGCCCTCCAACATCCTCGTCAACTCCAACTGTGACCTAAA
AATAACCGACTTCGGGCTTGCGCGTCGTATCACGGACCAAACCCGAGACC
TGACCGAGTACGTCGTCACCCGGTGGTATCGTGCGCCGGAAGTCATGCTT
TCTTCTTGTCAGTACAACAAGAGCGTGGATATTTGGTCGGCCGGATGTAT
TTTCGCCGAGATGTTACAACGGAAACCTCTCTTTCCCGGCGATAACTATC
GACATGTCCTGCGTTTGATCACCAAGGTGACAGGCTCGGTCTCGGAGGCA
GATCTGTGGTTTGTAAGCAATGCGAATGCCAAGGCCTACATGCTCCAGCG
TTTGCCTGCGTATCGTAAGATAGACTTTCGCAATCACTTGTCGGGGGCCT
CAGCGTCTGCATGCGAGTTGCTCTCCAAGATGCTAGAGTTCAATTTCGTG
AATCGAATATCTGTGGATGAGGCGTTAGCACATCCATATTTTGCTGACAT
TCGGGATCCGACTTGGGAGATTGAGGCGGGGTCAGACGTGTTGGAGTGGG
GGGATATCGACACGGTGGAGCCCGCGCGCCTAGCGATGCAGCGGATTATC
ATGGAGGATGGCGCCAGGTTGAATATAAGGAATGCCGAGGTGCTAAAGGA
GATCCAGAGAAAGATCCAGGAGTTGAGTAGGGAGGCGGGGACAACGACGG
GGATGAGGGCGGCTTGA

Synonyms

Publications