NO01G01850.1, NO01G01850.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO01G01850.1
Unique NameNO01G01850.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1371
Alignment locationchr1:467424..468794 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:467424..468794 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO01G01850.1 vs.
Match: EWM29181.1 (cell division cycle 5-like protein [Nannochloropsis gaditana])

HSP 1 Score: 728.0 bits (1878), Expect = 1.800e-206
Identity = 394/448 (87.95%), Postives = 413/448 (92.19%), Query Frame = 0 
Query:    1 MGIRIMVKGGVWKNSEDEILKAAVMKYGLNQWPRVASLLNRKSAAQCKGRWYEWLDPAIKKTEWTREEEEKLLHLAKILPAQWRTIAPIVGRTPAQCLEHYERLLDAAQQRSGDMESGEMKDDPRKLRPGEIDPAPETKPARPDPIDMDEDEKEMLSEARARLANTKGKKAKRKAREKMLMEAKRLASLQKRRELKAAGLELKMREKKRKYIDYGREIPFQRTAPAGFYATGDEKLEGQKQALDPRFEALRVDKMEAERRDEEENRMRNQDKKRHKKLVQESLPQMVQALNQLNDPASIRRRVPLSLPAPQVTDSDLEEIVKLGGAHGAGVQGGEGVGATAGLLGDYRERNTPLATPMRTPRTAPGQDVIMQEARNLLAMRAAETPLKGGEAVMGGLEEGTGFEGHEPRSVRGGGKGGKEDGGGTMTPLSSMG--GGKTPLMGGGGGG 447
            MGIRIMVKGGVWKNSEDEILKAAVMKYGLNQWPRVASLLNRKSAAQCK RWYEWLDP+IKKTEWTREEEEKLLHLAKILPAQWRTIAPIVGRTPAQCLEHYERLLDAAQQ++GDM++GE+KDDPRKLRPGEID APETKPARPDPIDMDEDEKEMLSEARARLANTKGKKAKRKAREKMLMEAKRLASLQKRRELKAAGLELKMREKKRKYIDYGREIPFQRTAPAGFYATG EKLEG+KQALDPRFEALRVDKME ERRDEEE+R+RNQDKKRHKKLVQE+LPQMVQALNQLNDPASIRRRVPLSLPAPQVTD DLEEIVK+ GA  A V GGE  GATAGLLGDYR+R TPLATPMRTP TAPGQDV+MQEARNLLAMRAAETPL+GGEAVM  LE GTGFEGHEPR + GGG       GG MTP+++    GG+TPL  G  GG
Sbjct:    1 MGIRIMVKGGVWKNSEDEILKAAVMKYGLNQWPRVASLLNRKSAAQCKARWYEWLDPSIKKTEWTREEEEKLLHLAKILPAQWRTIAPIVGRTPAQCLEHYERLLDAAQQKTGDMDAGEIKDDPRKLRPGEIDTAPETKPARPDPIDMDEDEKEMLSEARARLANTKGKKAKRKAREKMLMEAKRLASLQKRRELKAAGLELKMREKKRKYIDYGREIPFQRTAPAGFYATGAEKLEGEKQALDPRFEALRVDKMEDERRDEEESRLRNQDKKRHKKLVQENLPQMVQALNQLNDPASIRRRVPLSLPAPQVTDRDLEEIVKV-GAQAAAVGGGE--GATAGLLGDYRDRATPLATPMRTPSTAPGQDVVMQEARNLLAMRAAETPLQGGEAVMSRLEGGTGFEGHEPRGLGGGGM----TPGGGMTPMTARNEEGGRTPLSSGRVGG 441
The following BLAST results are available for this feature:
BLAST of NO01G01850.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM29181.11.800e-20687.95cell division cycle 5-like protein [Nannochloropsi... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G01850NO01G01850Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO01G01850.1NO01G01850.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO01G01850.1.cds1NO01G01850.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO01G01850.1 ID=NO01G01850.1|Name=NO01G01850.1|organism=Nannochloropsis oceanica|type=mRNA|length=1371bp
ATGGGGATTCGCATCATGGTTAAAGGCGGGGTGTGGAAGAACAGCGAGGA
TGAGATCCTCAAGGCCGCCGTCATGAAATACGGCCTCAATCAATGGCCTC
GGGTCGCCTCATTGCTCAACCGTAAGTCTGCCGCGCAATGTAAAGGACGA
TGGTACGAATGGCTGGACCCGGCCATCAAAAAGACGGAATGGACACGGGA
GGAGGAGGAGAAGTTGCTGCATTTAGCCAAGATCTTGCCAGCGCAATGGA
GGACAATTGCCCCTATCGTCGGTCGGACCCCTGCGCAGTGCCTGGAACAC
TACGAGCGGCTACTGGACGCGGCGCAACAACGGAGTGGGGACATGGAGTC
AGGAGAGATGAAGGACGATCCGCGCAAGCTTCGTCCGGGAGAGATTGACC
CTGCACCGGAGACGAAGCCCGCAAGGCCCGATCCTATCGATATGGACGAA
GATGAGAAGGAGATGCTGTCCGAGGCGAGGGCGCGTCTGGCGAACACCAA
GGGGAAGAAGGCCAAGCGCAAGGCACGGGAGAAGATGTTGATGGAAGCAA
AGCGCCTGGCGTCCTTGCAGAAGAGGAGAGAGCTGAAAGCGGCCGGCTTG
GAGTTAAAGATGAGGGAGAAGAAGAGGAAGTACATTGACTACGGGCGAGA
GATCCCCTTCCAGCGGACGGCGCCTGCTGGGTTCTACGCGACGGGCGATG
AGAAATTGGAAGGGCAAAAACAAGCCTTAGACCCTCGTTTTGAAGCCTTG
CGCGTGGATAAGATGGAGGCGGAGAGGAGGGACGAGGAGGAGAATCGGAT
GCGGAACCAGGACAAGAAGAGGCATAAGAAACTCGTCCAGGAGAGCCTCC
CGCAAATGGTCCAGGCATTGAACCAACTGAACGACCCTGCCTCGATCCGT
CGCCGGGTACCTCTTTCCCTCCCTGCACCCCAAGTGACTGATTCGGACCT
TGAGGAAATCGTGAAGCTCGGGGGTGCCCATGGTGCTGGGGTCCAGGGGG
GGGAAGGGGTAGGAGCGACGGCGGGGCTGCTGGGAGATTATCGGGAGCGA
AACACCCCGTTGGCGACACCGATGAGGACGCCGAGGACGGCTCCGGGACA
GGATGTAATCATGCAGGAGGCGAGGAATTTGTTGGCGATGCGCGCGGCGG
AGACCCCGCTGAAGGGGGGGGAGGCAGTGATGGGAGGGTTGGAGGAGGGG
ACGGGCTTTGAAGGTCATGAGCCGCGGAGTGTCAGGGGAGGCGGGAAAGG
AGGGAAGGAAGATGGAGGAGGAACGATGACCCCCTTGAGTAGTATGGGTG
GGGGGAAAACCCCGCTAATGGGAGGAGGAGGAGGAGGAGGGAGGGGGGAG
GAAGGGGGCCAGGGTCTGTAA
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protein sequence of NO01G01850.1

>NO01G01850.1-protein ID=NO01G01850.1-protein|Name=NO01G01850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=457bp
MGIRIMVKGGVWKNSEDEILKAAVMKYGLNQWPRVASLLNRKSAAQCKGR
WYEWLDPAIKKTEWTREEEEKLLHLAKILPAQWRTIAPIVGRTPAQCLEH
YERLLDAAQQRSGDMESGEMKDDPRKLRPGEIDPAPETKPARPDPIDMDE
DEKEMLSEARARLANTKGKKAKRKAREKMLMEAKRLASLQKRRELKAAGL
ELKMREKKRKYIDYGREIPFQRTAPAGFYATGDEKLEGQKQALDPRFEAL
RVDKMEAERRDEEENRMRNQDKKRHKKLVQESLPQMVQALNQLNDPASIR
RRVPLSLPAPQVTDSDLEEIVKLGGAHGAGVQGGEGVGATAGLLGDYRER
NTPLATPMRTPRTAPGQDVIMQEARNLLAMRAAETPLKGGEAVMGGLEEG
TGFEGHEPRSVRGGGKGGKEDGGGTMTPLSSMGGGKTPLMGGGGGGGRGE
EGGQGL*
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mRNA from alignment at chr1:467424..468794-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO01G01850.1 ID=NO01G01850.1|Name=NO01G01850.1|organism=Nannochloropsis oceanica|type=mRNA|length=1371bp|location=Sequence derived from alignment at chr1:467424..468794- (Nannochloropsis oceanica)
ATGGGGATTCGCATCATGGTTAAAGGCGGGGTGTGGAAGAACAGCGAGGA
TGAGATCCTCAAGGCCGCCGTCATGAAATACGGCCTCAATCAATGGCCTC
GGGTCGCCTCATTGCTCAACCGTAAGTCTGCCGCGCAATGTAAAGGACGA
TGGTACGAATGGCTGGACCCGGCCATCAAAAAGACGGAATGGACACGGGA
GGAGGAGGAGAAGTTGCTGCATTTAGCCAAGATCTTGCCAGCGCAATGGA
GGACAATTGCCCCTATCGTCGGTCGGACCCCTGCGCAGTGCCTGGAACAC
TACGAGCGGCTACTGGACGCGGCGCAACAACGGAGTGGGGACATGGAGTC
AGGAGAGATGAAGGACGATCCGCGCAAGCTTCGTCCGGGAGAGATTGACC
CTGCACCGGAGACGAAGCCCGCAAGGCCCGATCCTATCGATATGGACGAA
GATGAGAAGGAGATGCTGTCCGAGGCGAGGGCGCGTCTGGCGAACACCAA
GGGGAAGAAGGCCAAGCGCAAGGCACGGGAGAAGATGTTGATGGAAGCAA
AGCGCCTGGCGTCCTTGCAGAAGAGGAGAGAGCTGAAAGCGGCCGGCTTG
GAGTTAAAGATGAGGGAGAAGAAGAGGAAGTACATTGACTACGGGCGAGA
GATCCCCTTCCAGCGGACGGCGCCTGCTGGGTTCTACGCGACGGGCGATG
AGAAATTGGAAGGGCAAAAACAAGCCTTAGACCCTCGTTTTGAAGCCTTG
CGCGTGGATAAGATGGAGGCGGAGAGGAGGGACGAGGAGGAGAATCGGAT
GCGGAACCAGGACAAGAAGAGGCATAAGAAACTCGTCCAGGAGAGCCTCC
CGCAAATGGTCCAGGCATTGAACCAACTGAACGACCCTGCCTCGATCCGT
CGCCGGGTACCTCTTTCCCTCCCTGCACCCCAAGTGACTGATTCGGACCT
TGAGGAAATCGTGAAGCTCGGGGGTGCCCATGGTGCTGGGGTCCAGGGGG
GGGAAGGGGTAGGAGCGACGGCGGGGCTGCTGGGAGATTATCGGGAGCGA
AACACCCCGTTGGCGACACCGATGAGGACGCCGAGGACGGCTCCGGGACA
GGATGTAATCATGCAGGAGGCGAGGAATTTGTTGGCGATGCGCGCGGCGG
AGACCCCGCTGAAGGGGGGGGAGGCAGTGATGGGAGGGTTGGAGGAGGGG
ACGGGCTTTGAAGGTCATGAGCCGCGGAGTGTCAGGGGAGGCGGGAAAGG
AGGGAAGGAAGATGGAGGAGGAACGATGACCCCCTTGAGTAGTATGGGTG
GGGGGAAAACCCCGCTAATGGGAGGAGGAGGAGGAGGAGGGAGGGGGGAG
GAAGGGGGCCAGGGTCTGTAA
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Coding sequence (CDS) from alignment at chr1:467424..468794-

>NO01G01850.1 ID=NO01G01850.1|Name=NO01G01850.1|organism=Nannochloropsis oceanica|type=CDS|length=1371bp|location=Sequence derived from alignment at chr1:467424..468794- (Nannochloropsis oceanica)
ATGGGGATTCGCATCATGGTTAAAGGCGGGGTGTGGAAGAACAGCGAGGA
TGAGATCCTCAAGGCCGCCGTCATGAAATACGGCCTCAATCAATGGCCTC
GGGTCGCCTCATTGCTCAACCGTAAGTCTGCCGCGCAATGTAAAGGACGA
TGGTACGAATGGCTGGACCCGGCCATCAAAAAGACGGAATGGACACGGGA
GGAGGAGGAGAAGTTGCTGCATTTAGCCAAGATCTTGCCAGCGCAATGGA
GGACAATTGCCCCTATCGTCGGTCGGACCCCTGCGCAGTGCCTGGAACAC
TACGAGCGGCTACTGGACGCGGCGCAACAACGGAGTGGGGACATGGAGTC
AGGAGAGATGAAGGACGATCCGCGCAAGCTTCGTCCGGGAGAGATTGACC
CTGCACCGGAGACGAAGCCCGCAAGGCCCGATCCTATCGATATGGACGAA
GATGAGAAGGAGATGCTGTCCGAGGCGAGGGCGCGTCTGGCGAACACCAA
GGGGAAGAAGGCCAAGCGCAAGGCACGGGAGAAGATGTTGATGGAAGCAA
AGCGCCTGGCGTCCTTGCAGAAGAGGAGAGAGCTGAAAGCGGCCGGCTTG
GAGTTAAAGATGAGGGAGAAGAAGAGGAAGTACATTGACTACGGGCGAGA
GATCCCCTTCCAGCGGACGGCGCCTGCTGGGTTCTACGCGACGGGCGATG
AGAAATTGGAAGGGCAAAAACAAGCCTTAGACCCTCGTTTTGAAGCCTTG
CGCGTGGATAAGATGGAGGCGGAGAGGAGGGACGAGGAGGAGAATCGGAT
GCGGAACCAGGACAAGAAGAGGCATAAGAAACTCGTCCAGGAGAGCCTCC
CGCAAATGGTCCAGGCATTGAACCAACTGAACGACCCTGCCTCGATCCGT
CGCCGGGTACCTCTTTCCCTCCCTGCACCCCAAGTGACTGATTCGGACCT
TGAGGAAATCGTGAAGCTCGGGGGTGCCCATGGTGCTGGGGTCCAGGGGG
GGGAAGGGGTAGGAGCGACGGCGGGGCTGCTGGGAGATTATCGGGAGCGA
AACACCCCGTTGGCGACACCGATGAGGACGCCGAGGACGGCTCCGGGACA
GGATGTAATCATGCAGGAGGCGAGGAATTTGTTGGCGATGCGCGCGGCGG
AGACCCCGCTGAAGGGGGGGGAGGCAGTGATGGGAGGGTTGGAGGAGGGG
ACGGGCTTTGAAGGTCATGAGCCGCGGAGTGTCAGGGGAGGCGGGAAAGG
AGGGAAGGAAGATGGAGGAGGAACGATGACCCCCTTGAGTAGTATGGGTG
GGGGGAAAACCCCGCTAATGGGAGGAGGAGGAGGAGGAGGGAGGGGGGAG
GAAGGGGGCCAGGGTCTGTAA
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Synonyms
Publications