NO01G00520.2, NO01G00520.2 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G00520.2
Unique Name	NO01G00520.2
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2471
Alignment location	chr1:136221..141255 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:136221..141255 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO01G00520.2 vs.
Match: XP_011087733.1 (carotenoid 9,10(9',10')-cleavage dioxygenase 1-like [Sesamum indicum])

HSP 1 Score: 299.7 bits (766), Expect = 2.100e-77
Identity = 195/549 (35.52%), Postives = 279/549 (50.82%), Query Frame = 0

Query:   36 EDNRFLWGNYAPVQGDLFVPNLPVTTGKLPPEVTGLFARNGPNPAYIS-AGYHWFDGSGYIHSLRLDAATQTANYSGQFVQTPILMQERAAGRALANKFGDLRGIGALILTAVESIRKLVGIIDASDGMYTANTALLWHHHQLFALHEGDQPHLLHVSPEGKIRTQGRVHKAGEKGKWFTAHPKIDPESKKLYAFGYDLASPPFLSFYRMDATGTEEAVIPVGFSKPCMTHDFAVTHRHAVFLEGALYVAPEDLITHPRSASLFRFDPLKPTRLAVLPLDASTPEEAVWIDKMCDGSPIPASFVFHFGNAWEEEGSEKGRHGHRLIKMETHRYEHFELDFEGTIEKPNATEKHHAWTRDELDARVAHLYEYTIDLTSSCLLSSTRLFPPSADPRGWEFPQVDGRRAGRRTRYLYATAFNHAGEGEGFVKIDLEGGREGGRE----GGVGLVKVNYEEGTFGGEVIFVPREDKGGKEGGEEGGEDDGFLLTFVHSYPRNVSEFRVYDAREVEGGREGGEKGGLVASVVLPRRVPWGFHALWVGEKELKEQ 580
            + N +L GN+APV     + +LPV  G LP  + G F R G NP +   AGYHWFDG G IH LR+     T  Y  +FV+T  L QE   G     KFGD++GI  LI+  +  +R  + ++DAS G  TANTA+++HH +L ALHEGD+P+ + V  +G ++T G +         FTAHPK+DP + +++ FGY   +PP++++  +   G  E  +P+  + P M HDFAVT  +A+F++  LY  P++++   +   +F FDP K  R  VLP  A       W +       +P  F+FH  NAWEE G E        + + T R ++ +LD   +  K    E                LYE   +L +  L S  RL   + D     FP+V+    GR   Y+Y T      +  G +K DL    E G+E    GG      +   G FG E +FVPR+       G    EDDG+L+ FVH      S   V DA+ +            VA V LP+RVP+GFHAL+V E++L+EQ
Sbjct:   47 QPNHYLSGNFAPVDETPPLTDLPVK-GHLPECLNGEFVRVGSNPKFAPVAGYHWFDGDGMIHGLRIKDGKAT--YVSRFVKTSRLKQEELYGGPKFMKFGDMKGIFGLIMVNMHMLRTKLKVLDASYGFGTANTAIVYHHGKLMALHEGDKPYAIKVLEDGDLQTIGMLDYDKRLAHTFTAHPKVDPFTGEMFTFGYS-QTPPYVTYRVISKEGVMEDPVPITIADPVMMHDFAVTENYAIFMDLPLYFRPKEMVKEKKL--MFTFDPTKKARFGVLPRYAKNELLIRWFE-------LPNCFIFHNANAWEE-GDE--------VVLITCRLQNPDLDMFSSSVKEFTNE----------------LYEMRFNLKNG-LASQKRLSVSAVD-----FPRVNENYTGRNQHYVYGTILGSTAKVTGIIKFDLHAEPETGKEKLEVGGNITGIFDLGPGKFGSEAVFVPRQP------GTASDEDDGYLIFFVHDENTGKSAVNVIDAKTMSADP--------VAVVELPKRVPYGFHALFVTEEQLQEQ 537

The following BLAST results are available for this feature:

BLAST of NO01G00520.2 vs.

BLAST of NO01G00520.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_011087733.1	2.100e-77	35.52	carotenoid 9,10(9',10')-cleavage dioxygenase 1-lik...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO01G00520	NO01G00520	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO01G00520.2	NO01G00520.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO01G00520.2.cds1	NO01G00520.2.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00520.2.cds2	NO01G00520.2.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00520.2.cds3	NO01G00520.2.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00520.2.cds4	NO01G00520.2.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00520.2.cds5	NO01G00520.2.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00520.2.cds6	NO01G00520.2.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00520.2.cds7	NO01G00520.2.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00520.2.cds8	NO01G00520.2.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00520.2.cds9	NO01G00520.2.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00520.2.cds10	NO01G00520.2.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00520.2.cds11	NO01G00520.2.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr1:136221..141255+
coding sequence from alignment at chr1:136221..141255+

mRNA sequence

>NO01G00520.2 ID=NO01G00520.2|Name=NO01G00520.2|organism=Nannochloropsis oceanica|type=mRNA|length=2471bp
TCCATTGGTGTGGTGGCGTGCTGTATGTTATGGTGGCGCAAGGGAAGTGT
GCTTACATTCGTGCGTTTGTGTGTATGTGTACATGTGTGAATGTGTATAT
GAGGGGTTGGTTATGTTCCTTGTTTGGCAGTGCCGGCCTAACGGAGGCCG
TTGGAAAATAGGTCAAAGACGATTGAGCGGGGCTCTAGCATGCACAGGAT
AATCGATGGTATCACTTATCCCTATTGAGTGTGAGGGTGTGGTAAGTGAG
TGTGGGTGGACGGGCTTTGGTCCCCTGAAGGACACCCCCCGCTTCTTCGT
TCAGAACGGTGTGCGAGATGATGCGAGTCGCTGATTTTGACATGCTGAAA
AGAGCTTGGACCGCGTGCATGACGTGGCATTATTACTACCCGATGATGAG
GAGCAGAGGCGCGTGGTGCTGCATTGGTTTTCAAGTGTAATGGGCGTGTC
AACTTGTGCAAGCAAGCAAGCAAGCAAGCATCATCCGTCCGGGTAGGAGG
TCCCCCCTCATTCCCTCACCCTCGTCCTCCTCCATTCCACCTCAACGCAT
CCAGTACAGGCAAAAAGATGGGGAGTATATGGCGCCTGGTGCGGGATGGT
CTCGGGACTCTCTTGGCCCTGACGGAATCAGGTGTCTTTTGGATGCAAGG
GTCAGAGTTGAACCCACGCGGTGAGGATAATCGCTTTTTGTGGGGTAATT
ACGCACCTGTGCAAGGCGACTTGTTCGTGCCCAACCTGCCCGTGACCACC
GGAAAACTCCCTCCAGAAGTGACGGGCTTGTTCGCACGCAATGGGCCGAA
CCCAGCCTATATTTCAGCGGGCTATCATTGGTTTGACGGCTCGGGTTACA
TACACTCCTTGCGCTTGGACGCTGCCACGCAGACCGCGAATTACTCGGGT
CAGTTCGTCCAGACGCCCATCCTCATGCAAGAGCGGGCTGCCGGGCGGGC
GCTGGCAAATAAGTTCGGGGACCTGAGAGGCATCGGTGCATTAATACTCA
CGGCCGTTGAAAGCATTCGGAAACTTGTGGGGATCATCGACGCCAGCGAT
GGCATGTACACCGCCAACACAGCCCTCCTCTGGCACCATCACCAGCTTTT
CGCCCTCCACGAAGGAGACCAGCCGCACCTCCTCCACGTGTCTCCTGAGG
GGAAGATACGCACGCAGGGGCGGGTCCACAAAGCGGGAGAAAAAGGGAAG
TGGTTCACTGCCCACCCCAAGATCGACCCGGAGAGCAAGAAGCTCTATGC
CTTCGGCTATGACCTGGCCTCGCCACCCTTCCTCTCCTTCTACCGCATGG
ACGCCACAGGCACGGAGGAGGCGGTCATTCCCGTGGGATTCAGCAAGCCC
TGCATGACGCACGACTTTGCCGTTACGCATCGCCACGCCGTCTTTTTGGA
GGGGGCGTTGTACGTGGCGCCGGAGGACCTCATCACCCACCCTCGTTCCG
CTTCCCTCTTCCGTTTCGATCCTCTCAAACCCACCCGCCTGGCCGTCCTC
CCCCTCGACGCCTCCACGCCCGAGGAGGCCGTGTGGATCGACAAAATGTG
CGACGGCTCCCCCATCCCTGCCTCCTTCGTCTTTCACTTCGGCAATGCCT
GGGAGGAAGAGGGGTCGGAAAAAGGCCGACATGGACACAGACTCATCAAG
ATGGAGACGCACCGCTACGAGCACTTTGAATTGGATTTTGAGGGCACCAT
CGAGAAGCCTAACGCGACCGAGAAACATCATGCCTGGACCCGAGATGAGC
TAGACGCACGAGTCGCCCACCTCTATGAATATACGATCGACCTGACGTCT
TCCTGCCTCCTCTCCTCCACCCGGCTCTTCCCTCCCTCTGCCGACCCGCG
GGGATGGGAGTTCCCGCAGGTGGATGGACGGAGGGCGGGCAGGCGGACGA
GGTACTTGTATGCCACCGCTTTTAATCACGCAGGAGAAGGGGAGGGTTTC
GTGAAAATCGACCTGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGT
GGGGCTGGTGAAGGTCAACTACGAGGAGGGCACCTTCGGGGGGGAGGTGA
TCTTTGTGCCGAGGGAGGACAAGGGCGGGAAGGAGGGAGGGGAGGAGGGC
GGGGAGGACGACGGGTTTTTGCTGACGTTTGTGCATTCTTACCCGAGGAA
CGTGAGCGAATTTCGGGTGTACGATGCGAGGGAGGTGGAGGGAGGGAGGG
AGGGTGGGGAGAAGGGAGGGCTGGTAGCGTCCGTGGTGTTGCCCCGACGG
GTGCCTTGGGGATTTCATGCTCTGTGGGTGGGGGAGAAGGAGCTGAAGGA
GCAGCAGGGGATGGTGAGGTTGAGGAAGGGGAAGGTGGTGAAGGAGGAGG
GAAAGGGGGAGGGAGGGAAAGAGGAGTTGTAAGGGAAAGAAGGATGTAAA
GAGAGACGAAAAGGAGGATGAGATGTCATGGAGGGAGGAGGAGGGGGAGG
AGGAGGAGGGGGAGGAGGAGG

protein sequence of NO01G00520.2

>NO01G00520.2-protein ID=NO01G00520.2-protein|Name=NO01G00520.2|organism=Nannochloropsis oceanica|type=polypeptide|length=605bp
MGSIWRLVRDGLGTLLALTESGVFWMQGSELNPRGEDNRFLWGNYAPVQG
DLFVPNLPVTTGKLPPEVTGLFARNGPNPAYISAGYHWFDGSGYIHSLRL
DAATQTANYSGQFVQTPILMQERAAGRALANKFGDLRGIGALILTAVESI
RKLVGIIDASDGMYTANTALLWHHHQLFALHEGDQPHLLHVSPEGKIRTQ
GRVHKAGEKGKWFTAHPKIDPESKKLYAFGYDLASPPFLSFYRMDATGTE
EAVIPVGFSKPCMTHDFAVTHRHAVFLEGALYVAPEDLITHPRSASLFRF
DPLKPTRLAVLPLDASTPEEAVWIDKMCDGSPIPASFVFHFGNAWEEEGS
EKGRHGHRLIKMETHRYEHFELDFEGTIEKPNATEKHHAWTRDELDARVA
HLYEYTIDLTSSCLLSSTRLFPPSADPRGWEFPQVDGRRAGRRTRYLYAT
AFNHAGEGEGFVKIDLEGGREGGREGGVGLVKVNYEEGTFGGEVIFVPRE
DKGGKEGGEEGGEDDGFLLTFVHSYPRNVSEFRVYDAREVEGGREGGEKG
GLVASVVLPRRVPWGFHALWVGEKELKEQQGMVRLRKGKVVKEEGKGEGG
KEEL*

mRNA from alignment at chr1:136221..141255+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO01G00520.2 ID=NO01G00520.2|Name=NO01G00520.2|organism=Nannochloropsis oceanica|type=mRNA|length=5035bp|location=Sequence derived from alignment at chr1:136221..141255+ (Nannochloropsis oceanica)
TCCATTGGTGTGGTGGCGTGCTGTATGTTATGGTGGCGCAAGGGAAGTGT
GCTTACATTCGTGCGTTTGTGTGTATGTGTACATGTGTGAATGTGTATAT
GAGGGGTTGGTTATGTTCCTTGTTTGGCAGTGCCGGCCTAACGGAGGCCG
TTGGAAAATAGGTCAAAGACGATTGAGCGGGGCTCTAGCATGCACAGGAT
AATCGATGGTATCACTTATCCCTATTGAGTGTGAGGGTGTGGTAAGTGAG
TGTGGGTGGACGGGCTTTGGTCCCCTGAAGGACACCCCCCGCTTCTTCGT
TCAGAACGGTGTGCGAGATGATGCGAGTCGCTGATTTTGACATGCTGAAA
AGAGCTTGGACCGCGTGCATGACGTGGCATTATTACTACCCGATGATGAG
GAGCAGAGGCGCGTGGTGCTGCATTGGTTTTCAAGTGTAATGGGCGTGTC
AACTTGTGCAAGCAAGCAAGCAAGCAAGCATCATCCGTCCGGGTAGGAGG
TCCCCCCTCATTCCCTCACCCTCGTCCTCCTCCATTCCACCTCAACGCAT
CCAGTACAGGCAAAAAGATGGGGAGTATATGGCGCCTGGTGCGGGATGGT
CTCGGGACTCTCTTGGCCCTGACGGAATCAGGTGTCTTTTGGATGCAAGG
GTCAGAGTTGGTACATTTTTTGAAGCGGGGAAAGAGTGGGAGGAGGTAGA
GGAGGAAAAGCAATGTGTGTGAGGGCTGAGAAAAGGGAAGGGAGCTGGAA
AGGGAAAGGGGGGAAAATACATGTTCGTATTTCGCATTCATATACATTGT
CGCACCCCTTTTAAACCCCTCTTTTGTGTGTAGAACCCACGCGGTGAGGA
TAATCGCTTTTTGTGGGGTAATTACGCACCTGTGCAAGGCGACTTGTTCG
TGCCCAACCTGCCCGTGACCACCGGAAAACTCCCTCCAGAAGTGACGGGC
TTGTTCGCACGCAATGGGCCGAACCCAGCCTATATTTCAGCGGGCTATCA
TTGGTAAGGGAGGGATGGAGGAAGGGTGGGGGAAGGGAGGGAGGGCGGGA
GGGGGGAACAAACGCCGAAGAAGTTGCATGTTGCTTTCCTCCGCACTTTC
CCAGTCGTCATTTCCGTCTCATTCTCTACGTCTTTTGCAGGTTTGACGGC
TCGGGTTACATACACTCCTTGCGCTTGGACGCTGCCACGCAGACCGCGAA
TTACTCGGGTCAGTTCGTCCAGACGCCCATCCTCATGGTTAGGAGGGAGG
GAGGGAGGGAGGCGGGAAAGGGAGAGGAAAAAGGAGGGAAAGATAGAAGG
AAACAAGGTAGAAGGGAGAGAAGGAGAAACAGATATATAGAGGTGCATTA
GTTCCTCTCAATCAGGTGAGGAGTGAGGCTGGAGGGAGTTAGGGTACAAG
CAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGTAGAAAGATTTGG
AGGGATGGACATGCCAGAGAGCACGCACTGCGTTGCAATGCCCAACACCT
GTCCTTACACCTCCGTCCTGCGAAGGGCGGGGGTGTGGAGGCGTGGGTCG
TTGCGGCTCTATATCAGTGCCAGAGCAACCCTGGGTAGTGTGATGTAATA
CGTCCTCAACTTTTGATAGGCTTAGGGCGACCACCGTGCTACCCACATTC
TCAATGTGTTCATGTATGTACACGTGTATATATATATATGTATGTATGTA
TATGTATATATACATCTCTATATCTCTATATCTATATATCTATATCTAAT
ATCTAATATATATTCTAATATATTTTAATTTATACATATTTATACATCCA
TCTATCTATCTATATGTATCTACATCGATGTGATGCGCCCTACAGTGTGT
GTATATGGAAAGAGGGAGGGAAAGCGTGGCAGATGATGGGTCCAAGGGAC
GACAAGAACTGCCAGGCTTTGACATAGCCCTCCCTCCCTGCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCTTCCC
TCCCTCCTTCCCTCCCTCCCTTCTTCCCTCCCTCCTTCCCTGCCAGGCTT
TGACATGGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCAGCAAG
AGCGGGCTGCCGGGCGGGCGCTGGCAAATAAGTTCGGGGACCTGAGAGGC
ATCGGTGCATTAATACTCACGGCCGTTGAAAGCATTCGGAAACTTGTGGG
GATCATCGACGCCAGCGATGTAAGGAGGGAGGGAGGGAGGAAGGGAAGGA
AGGAGGGAGGGAGGGAGGGAAGGAAGGAAGGATTAACGGAAGGAGGAGTC
AACTGCTATTCGGATTCAATGTCTCGCCCCCTCTATCCCTCCCTCACTTG
CCTCCCTCACCACCCTCATCTCTCCCTCCCTCCCCTTCTCCCTCCCTCCC
CACCCATCCCCCTCCCTCCCTCCCTTCCTCTCTCCTTCCAGGGCATGTAC
ACCGCCAACACAGCCCTCCTCTGGCACCATCACCAGCTTTTCGCCCTCCA
CGAAGGAGACCAGCCGCACCTCCTCCACGTGTCTCCTGAGGGGAAGATAC
GCACGCAGGGGCGGGTCCACAAAGCGGGAGAAAAAGGGAAGTGGTTCACT
GCCCACCCCAAGGTAGGTAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAAGGTGGGGTTATAGAGACGTTAAAT
GTATCATCACCTCTTCTTCCTATCCCCCCTCCTCCCCCCACTCCCTGAAG
ATCGACCCGGAGAGCAAGAAGCTCTATGCCTTCGGCTATGACCTGGCCTC
GCCACCCTTCCTCTCCTTCTACCGCATGGACGCCACAGGTAAGCCCCTCC
CTCCCTCCCTCCCTCCCTTCCTTCCTTTTTTATTTCTGATGCCTGCTCAT
TCCCCCCTCACTAGGCACGGAGGAGGCGGTCATTCCCGTGGGATTCAGCA
AGCCCTGCATGACGCACGACTTTGCCGTTACGCATCGCCACGCCGTCTTT
TTGGAGGGGGCGTTGTACGTGGCGCCGGAGGTAGGGCGGGAGGAAGGGAG
GGAGAAAAGACCGGGGGGAGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAT
GGAGGGCGGGAGGGAGGGAGGGAGGGAGGGAGGGCGGGAGGGCGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGACCGGGG
GGAGGGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGTGCATGT
TCCCATCCCAATCCCCATTTGACGCAACAGTATCCTTATGAATGCATGTC
CCTCCGTCCCTCCTTCCCTCCCTCCATCCCTTAGGACCTCATCACCCACC
CTCGTTCCGCTTCCCTCTTCCGTTTCGATCCTCTCAAACCCACCCGCCTG
GCCGTCCTCCCCCTCGACGCCTCCACGCCCGAGGAGGCCGTGTGGATCGA
CAAAGTACGAGGCCCGTGCCCTCTCTCCTTATACCCCCCCTCCCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCTTCAACCCTCCCTTTCCTTAACCTCAACGGGCTGTTCCCTC
CCTCCCTCCCTCCCTCCTCTCTTCCTAGATGTGCGACGGCTCCCCCATCC
CTGCCTCCTTCGTCTTTCACTTCGGCAATGCCTGGGAGGAAGAGGGGTCG
GAAAAAGGCCGACATGGACACAGACTCATCAAGATGGAGACGCACCGGTA
GGGAGGGAGGGAGGGAGTGGGTTTCATAGCAGTACACAAATCGCACGCAC
GTACTCAGGCTTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCTTCACTTTAATCCAAGCTACGAGCACTTTGAATTGGATTTTG
AGGGCACCATCGAGAAGCCTAACGCGACCGAGAAACATCATGCCTGGACC
CGAGATGAGCTAGACGCACGAGGTGAGGGGAGGGAGGAAGGCGAGGGAGG
GGAGGAATAGAGTGTGAGTGTGCTGGGAGAGGTAGAATAGAGGTAGGAAG
GAAGGGAGGAAGGGAGGAAGGGGGAAAGGACGGAAGGACGGAAGGAAGGA
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGTGTCTTAGGGGAATA
ATGCACACCCCCTATAAAGGTCCATCACGATTGCGACTCCCTCCGTCCCT
CCGCCCCTCCGACCCCCCCTCCACAGTCGCCCACCTCTATGAATATACGA
TCGACCTGACGTCTTCCTGCCTCCTCTCCTCCACCCGGCTCTTCCCTCCC
TCTGCCGACCCGCGGGGATGGGAGTTCCCGCAGGTGGATGGACGGAGGGC
GGGCAGGCGGACGAGGTACTTGTATGCCACCGCTTTTAATCACGCAGGAG
AAGGGGAGGGTTTCGTGAAAATCGACCTGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGGTGGGGCTGGTGAAGGTCAACTACGAGGAGGGCACCTT
CGGGGGGGAGGTGATCTTTGTGCCGAGGGAGGACAAGGGCGGGAAGGAGG
GAGGGGAGGAGGGCGGGGAGGACGACGGGTTTTTGCTGACGTTTGTGCAT
TCTTACCCGAGGAACGTGAGCGAATTTCGGGTGTACGATGCGAGGGAGGT
GGAGGGAGGGAGGGAGGGTGGGGAGAAGGGAGGGCTGGTAGCGTCCGTGG
TGTTGCCCCGACGGGTGCCTTGGGGATTTCATGCTCTGTGGGTGGGGGAG
AAGGAGCTGAAGGAGCAGCAGGGGATGGTGAGGTTGAGGAAGGGGAAGGT
GGTGAAGGAGGAGGGAAAGGGGGAGGGAGGGAAAGAGGAGTTGTAAGGGA
AAGAAGGATGTAAAGAGAGACGAAAAGGAGGATGAGATGTCATGGAGGGA
GGAGGAGGGGGAGGAGGAGGAGGGGGAGGAGGAGG

Coding sequence (CDS) from alignment at chr1:136221..141255+

>NO01G00520.2 ID=NO01G00520.2|Name=NO01G00520.2|organism=Nannochloropsis oceanica|type=CDS|length=1815bp|location=Sequence derived from alignment at chr1:136221..141255+ (Nannochloropsis oceanica)
ATGGGGAGTATATGGCGCCTGGTGCGGGATGGTCTCGGGACTCTCTTGGC
CCTGACGGAATCAGGTGTCTTTTGGATGCAAGGGTCAGAGTTGAACCCAC
GCGGTGAGGATAATCGCTTTTTGTGGGGTAATTACGCACCTGTGCAAGGC
GACTTGTTCGTGCCCAACCTGCCCGTGACCACCGGAAAACTCCCTCCAGA
AGTGACGGGCTTGTTCGCACGCAATGGGCCGAACCCAGCCTATATTTCAG
CGGGCTATCATTGGTTTGACGGCTCGGGTTACATACACTCCTTGCGCTTG
GACGCTGCCACGCAGACCGCGAATTACTCGGGTCAGTTCGTCCAGACGCC
CATCCTCATGCAAGAGCGGGCTGCCGGGCGGGCGCTGGCAAATAAGTTCG
GGGACCTGAGAGGCATCGGTGCATTAATACTCACGGCCGTTGAAAGCATT
CGGAAACTTGTGGGGATCATCGACGCCAGCGATGGCATGTACACCGCCAA
CACAGCCCTCCTCTGGCACCATCACCAGCTTTTCGCCCTCCACGAAGGAG
ACCAGCCGCACCTCCTCCACGTGTCTCCTGAGGGGAAGATACGCACGCAG
GGGCGGGTCCACAAAGCGGGAGAAAAAGGGAAGTGGTTCACTGCCCACCC
CAAGATCGACCCGGAGAGCAAGAAGCTCTATGCCTTCGGCTATGACCTGG
CCTCGCCACCCTTCCTCTCCTTCTACCGCATGGACGCCACAGGCACGGAG
GAGGCGGTCATTCCCGTGGGATTCAGCAAGCCCTGCATGACGCACGACTT
TGCCGTTACGCATCGCCACGCCGTCTTTTTGGAGGGGGCGTTGTACGTGG
CGCCGGAGGACCTCATCACCCACCCTCGTTCCGCTTCCCTCTTCCGTTTC
GATCCTCTCAAACCCACCCGCCTGGCCGTCCTCCCCCTCGACGCCTCCAC
GCCCGAGGAGGCCGTGTGGATCGACAAAATGTGCGACGGCTCCCCCATCC
CTGCCTCCTTCGTCTTTCACTTCGGCAATGCCTGGGAGGAAGAGGGGTCG
GAAAAAGGCCGACATGGACACAGACTCATCAAGATGGAGACGCACCGCTA
CGAGCACTTTGAATTGGATTTTGAGGGCACCATCGAGAAGCCTAACGCGA
CCGAGAAACATCATGCCTGGACCCGAGATGAGCTAGACGCACGAGTCGCC
CACCTCTATGAATATACGATCGACCTGACGTCTTCCTGCCTCCTCTCCTC
CACCCGGCTCTTCCCTCCCTCTGCCGACCCGCGGGGATGGGAGTTCCCGC
AGGTGGATGGACGGAGGGCGGGCAGGCGGACGAGGTACTTGTATGCCACC
GCTTTTAATCACGCAGGAGAAGGGGAGGGTTTCGTGAAAATCGACCTGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGTGGGGCTGGTGAAGGTCA
ACTACGAGGAGGGCACCTTCGGGGGGGAGGTGATCTTTGTGCCGAGGGAG
GACAAGGGCGGGAAGGAGGGAGGGGAGGAGGGCGGGGAGGACGACGGGTT
TTTGCTGACGTTTGTGCATTCTTACCCGAGGAACGTGAGCGAATTTCGGG
TGTACGATGCGAGGGAGGTGGAGGGAGGGAGGGAGGGTGGGGAGAAGGGA
GGGCTGGTAGCGTCCGTGGTGTTGCCCCGACGGGTGCCTTGGGGATTTCA
TGCTCTGTGGGTGGGGGAGAAGGAGCTGAAGGAGCAGCAGGGGATGGTGA
GGTTGAGGAAGGGGAAGGTGGTGAAGGAGGAGGGAAAGGGGGAGGGAGGG
AAAGAGGAGTTGTAA

Synonyms

Publications