jgi.p|Nanoce1779_2|658583, gene_9778 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|658583
Unique Namegene_9778
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_32:26408..29163 -

Link to JBrowse

Properties
Property NameValue
TranscriptId658669
ProteinId658583
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_32supercontigscaffold_32:26408..29163 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL050ncniL050Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO18G00070NO18G00070Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|658583mRNA_9778-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|658583mRNA_9778Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|658583

>mRNA_9778-protein ID=mRNA_9778-protein|Name=jgi.p|Nanoce1779_2|658583|organism=Nannochloropsis oceanica|type=polypeptide|length=604bp
MSVIDENGLLPGLPFHEEEEEEIELYLLHHDEEQQEEDENDFQGFDLEVE
DDKINDNNSSITSDTDASAMAKRKQLLTPAPPVQETSSVGSLRGLHWPSR
SQTSRRKRLRRAAGNCNIHLRSVHNIVSVRSKSMSAKKGQDQGQLQRCGM
EEMKMIDDKGVDGGQRYDKLIFVNAMKKSIVDELEGIKGRFLPSLAFLID
IWEDKFSGKKFLGIRVRNLDDNWRVRKLREDHQLSMLVSIWVKSCLSDYG
LKVDNFVGAVSDSGSDVKRCCISKNCLGLPWEWCGPHLLNRALVDALGWT
ETSTAKDSEVLFDDVQRKMYGQALKLVNFAMNRWSSAEECLRCVLTEYKP
ILRTYHSRSRRTELRKLKQTVLDLYTLVRAVNIVLKDMQSNSPTSGPCFV
LGIAEPLASELCLEYLSTGDCDRASYVFDAAALAHPAMYKMRHVDRMCDT
PTQASHVKELIKNFVISKFQELWWDPASRKDDATGEGQSSRQKTLAQFRP
KKPRYATLFGEDEEDDCERGTRGGSVLRSVDWAEHQLNEYLACFQSLLAM
PGGAAALERDFSIANNLLTVHRARLDPVYVEMNMILHMNIDKIPPVSQSP
ISG*
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Synonyms
Publications