jgi.p|Nanoce1779_2|624117, gene_9690 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|624117
Unique Namegene_9690
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_38:123916..130665 +

Link to JBrowse

Properties
Property NameValue
TranscriptId624203
ProteinId624117
Product namePyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_38supercontigscaffold_38:123916..130665 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0047334diphosphate-fructose-6-phosphate 1-phosphotransferase activity
GO:00038726-phosphofructokinase activity
Vocabulary: Cellular Component
TermDefinition
GO:00059456-phosphofructokinase complex
Vocabulary: Biological Process
TermDefinition
GO:0006096glycolytic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL056ncniL056Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G03890NO09G03890Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|624117mRNA_9690-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|624117mRNA_9690Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|624117

>mRNA_9690-protein ID=mRNA_9690-protein|Name=jgi.p|Nanoce1779_2|624117|organism=Nannochloropsis oceanica|type=polypeptide|length=1142bp
MSAPAEPLPRPEVRSTFSALQKHRLATPPKIPAVLKAKNVQAVTKEALGA
VADHEQIEGLFPTTYGKPRIELEAGPEDSDLPLGSGKALRVGVVLSGGQA
SGGHNVIAGVYDYIKSQNPASVLLGFANGPKGVYTGKYYVIDDSFMDAYR
NTGGFDALGSGRNKIESAEEFAGAKKVCESLALDGLVVIGGDDSNTNAAV
LAEYFATHNCPTRVIGAPKTIDGDLKNEYIPVSFGFDTACKTYSELIGNV
MLDCLSSQKYYHFVRLMGRSASHIALECALQTRPNVTLISEEVEAKHLSL
SQVTHSLVNTIVERAKQGKHYGVILLPEGIIEFIPEFQALMHELNDLMAA
GVANNEEAVMQELSFNNRAVFSYLPANIKEQLLLDRDPHGNVQVAKIETE
KLLAGTIEQELEKIRHHGKYAGVFQPQFHSFGYEGRAGLPSEFDSNYCYS
LGLTAGNLIGKGLTSLMVSITGICGPVEDWNCGGVPLTMMMNMEKRHGKL
KPVIRKALVELEGKPLQVLMKRRDKWAVDDCYRAPGPIQFDGPCSHEVNL
TLQYECLPESEVQDPPDVPRPMTRMGDYMFSPTPRACLSSVQVHRLGYQN
RVPHALREGTTVDVRVVEGEATQCVFSKDRGLMSREFPRSNSTLLGFVGG
IDGLYKQQTVLVTSELLSTYRNQGGLDMLGRSHEKFPDTLPKMEGFKDAC
VALKLDGLVFVGGCRTATGVAYLTEYLKAESVPTVCTVVPAGIDGTLTNQ
FVESTVGFHTACQVYSELVGNTAIDGASAKKYWMFLRLMGSDVSNIALEV
ALRSAPNMILLAEDVDASRMSLQEVVRQVADLVTARAARGRNYGTVLIPE
GLVLSIPEIAVLLHEIDSLSIESEDKDLTVEAVAKHLTSWSAALLLSMPL
YIQVQMTKKRHSNKSVQLSAIETERLLCHFVEAELSRRKTLGQYNGSFSP
VCSFLGYQARGSLPSNFDCNLGYSLGGTAAVLVHNGLSGYLATITGLKGK
EEEEWKVAGVPLTAMLALDDHKHHHLAYNGQLRPHVPVKKVDLHGAAYKY
LVEKRREWGMHDMYENSGPLQFDGTTADDRPATVVEEDRDYLEELEVLHA
ALHQVRRACRPGCSSALLHLATKSILTLTDVVSMMDEVASV*
back to top
Synonyms
Publications