jgi.p|Nanoce1779_2|674200, gene_9678 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|674200
Unique Namegene_9678
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_38:82655..84465 +

Link to JBrowse

Properties
Property NameValue
TranscriptId674286
ProteinId674200
Product nameshort chain dehydrogenase/reductase family
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_38supercontigscaffold_38:82655..84465 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0050356tropine dehydrogenase activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL056ncniL056Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G04000NO09G04000Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674200mRNA_9678-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674200mRNA_9678Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|674200

>mRNA_9678-protein ID=mRNA_9678-protein|Name=jgi.p|Nanoce1779_2|674200|organism=Nannochloropsis oceanica|type=polypeptide|length=300bp
MSLLLALRKHSSDNNNYNSVMAPSSIASSSSSLSISHLFDVTGKTVLITG
GGTGIGRMLAQGFVDNGARVFIASRREAKQAAAEIVGASSLPPSLAFCRG
LTADLAKGEGEQTALLAAVAKETGGKLHVLINNAGTNWAEPIESYPLHAF
DKVVSLNLTSLFSLTRLALPLLEAAATPHDPARVINIGSIDGKRVTLIDH
FAYSSSKAAVHRLSRVLAGKLGHRNITVNALAPGPFASKMMKVTLERARE
EIEGSAALGRIGHPEDIAGAALFLASRAGAYVTGAVLVVDGGILVKPKL*
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Synonyms
Publications