jgi.p|Nanoce1779_2|642464, gene_9495 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|642464
Unique Namegene_9495
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_34:134951..148648 -

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Properties
Property NameValue
TranscriptId642550
ProteinId642464
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_34supercontigscaffold_34:134951..148648 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0005524ATP binding
GO:0015662ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
Vocabulary: Biological Process
TermDefinition
GO:0015914phospholipid transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL052ncniL052Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G00400NO21G00400Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|642464mRNA_9495-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|642464mRNA_9495Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|642464

>mRNA_9495-protein ID=mRNA_9495-protein|Name=jgi.p|Nanoce1779_2|642464|organism=Nannochloropsis oceanica|type=polypeptide|length=1599bp
MHPIKGLRPPPRRPSSEGQGNGSSSSSSSSSSSNNSTNAGAASYAHIPQA
QTGRDNPPPADVGNGNSDDGTGGDGGGGGGRGGRWSGGGSLGRWTSRDVE
GPISFGETEEFSFESMKESGWSRPSSMSRGESSMMRGWAMAAEESDDEDH
SATAARGIGRNRRKSVELRAGELVPPVGVLHYAADKNVEGSGEVSPVAPA
RASVTPHSAKQPSNPKDWPCCTEEALAERPYRRVLINAEEQEFSFGSNLI
ITSNGLCYRCEVEGRWRCVPQISNTYGVPTILLPLSFVIFVDAVFAALED
IRRHRADEAANSSPCLIWNPTTHFHSRSWVDIQVGDFLKIQNREVVPSDL
ILLAVHEPDAAQPDGICYPRNKVVGWRDQFEAQTVESTRGKITTGADVAK
LRGLVEMEHPNKLIDSFTGTLELYHTTDNWHVKEAIEPTSVLLRGCTIRN
TDWVVGLVVNTGNDTKIMMSNVDPPLKLSSMTYLINTEIRHVVLLLVMVC
CIGATGYLVRQNLYNKSDWYLRYGPDEVANGAVQGIGIWVTQFAYFFLLC
GNFIPVSLYVSMSTVRFFQSYFMEWDIGMYHTTTDNHAEVRTMNLNEELG
QISHVFTDKTGTLTCNVMEFRKCSVGGYSYGLGVTEISKSYKKMTGLARR
GVETFSRRSLRHFFRLLAVCHSVIPEKNEGTGETKFSASSPDDEALVCAA
RFFGYAFEGRRDGSALVRNMQRDVIEGYRVLEILEFTSARKRMSVIVEAV
DDGQILVLAKGADTAMGPRLRPGQGALLEATLDHMKRYASEGLRTLMICS
ASMTKEAFGRWYLEFERAAKDLVQIELRKSGKDNQIDAMMDKIENNLELL
GATAIEDKLQEGVPEAIHDLSRAGIKVWMLTGDKEETAVNIGVACNLLEP
SSKMRRITINTAKCQNEHQVRYLLKHELQKFKEDYEKHHETCKPRALIID
GPTLMLASKEGVRRRLLKLTRICKSVVACRVSPDQKRSIVHLVKNNEVNC
RAMSIGDGANDVPMIQEAHIGVGIAGMEGMQAVNASDYSIAQFRFLRSLL
LVHGRYNYRRMAFIVAYIFYKNIFQAVAQFFFAFCNSFSGQKYFTEGSIQ
LYNYPELYIPGIHSPLPHLALFLVNEPGQVFSSFWETGAITYTLIILVVT
LKIGFRQEMWTKWNVFAYVFSVIAWFAVAVAISSIMRIDSNWYQLFPTVM
GSWAPWLCIVVVTAMIEAPDLFMLAYKRAFHPSLAHVLQALERGVLSDSP
SLRHALKDMQQHECRGATGGPPPAVTPASGGTPIEVMRRMTGADGSLLGG
GRKPAGFAFSADPITLEAERRMIMSRSVRMAPIRDILEELENTDDNDWPE
GMLPPPVERMDSTASGISPSTTTSPSSPSPSPSSSSTMHHTLSNTSDKCK
GGRGQASPRVWTEFAATGNRILEGNQEEGEGEEAREDGVSYPPPSLPPTG
DSSSKGASAMAAMFLCNPEREGGREGGREGGREGGLHATLSSSSSSASHA
GESSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSNSSSCSNNSSSSSNNSSSNYNNK*
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Synonyms
Publications