jgi.p|Nanoce1779_2|507916, gene_9481 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|507916
Unique Namegene_9481
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_34:94298..97215 +

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Properties
Property NameValue
TranscriptId508002
ProteinId507916
Product nameQuinonprotein alcohol dehydrogenase-like superfamily
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_34supercontigscaffold_34:94298..97215 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Cellular Component
TermDefinition
GO:0032040small-subunit processome
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL052ncniL052Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G00540NO21G00540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|507916mRNA_9481-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|507916mRNA_9481Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|507916

>mRNA_9481-protein ID=mRNA_9481-protein|Name=jgi.p|Nanoce1779_2|507916|organism=Nannochloropsis oceanica|type=polypeptide|length=883bp
MRFGYRLSRLSGAVHSGGNVIFSPDGNTLYSLVGNRVAAFDLVAHTCFTL
PYEHAHPIRRLAISPDGRFLLTVDKGGYLFLVHLLRRIILCRMRLKRTHK
VRDLVFSPDGQYFAITQERQFQVWRTPGAAREFAPFVLHRTYGSHSDDIL
SVAWSPCGQFLTTASKDLTVRVWSLHPLPPSIFVPATLSGHRDRVVCAFF
STTVPAAALPSEPLLALASEDGPPFSTPADDSAMTFPSINGEQQARSPLS
SLLLYSIAKDGFLYCWAYDEGTRAWSCQERQAFQKARRATVASASFHSSS
SGNSSTSLLVVGFSDGVFGLYEIPTCQVIHTLSVSHGGLGTVALNKTGEW
LALGCGPLGQLLVWEWQSETYVLKQQGHADAVNAVAFSPDGQSLVTGGED
AKVKLWSAGSGFSYATFTAHEAPISALAFLGSGQAILSASLDGTVRAHDL
LRYRNFRTLTTPNPTQLLSLAVDPSGEVVCAGSNEPFEVYVWALQTGKLL
EILPGHGGPVVALDFSPSEPILASGSWDGTVKMWNVYKKELIETHTHASD
VLAVAFRPDGKELCVATLNGHLTFWDVAEGHQMRIIEGKRDIRGGRGLKD
KVSSASSAASKHFTSVAYTADGMCVIAGGRSKFVCIYHVESKALVRKFQL
SHDKNLDGVLDKLDSRKVGSDGLPMEEEEEESDEEGGRGEEGLPGAKRGV
NLSKRTTRAEVRSSCVRFSPTGREWAAATPQGLLVYGLEEDMVFNPLELD
EAATPAAVTRKIKEDNIAMALVLACQLNEEKIMLQALEAAPPTFDALLLL
ARALPSSLSPRLLALLAKHLPASPHLSFLLSFSLALLQTHGGFLRRDPSR
HAPHLRALQRAILKVQEDIGRHAESSTALLDLL
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Synonyms
Publications