jgi.p|Nanoce1779_2|606010, gene_9290 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|606010
Unique Namegene_9290
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_33:225201..234091 +

Link to JBrowse

Properties
Property NameValue
TranscriptId606096
ProteinId606010
Product nameArmadillo-type fold
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_33supercontigscaffold_33:225201..234091 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005643nuclear pore
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Homology
Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606010mRNA_9290-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606010mRNA_9290Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|606010

>mRNA_9290-protein ID=mRNA_9290-protein|Name=jgi.p|Nanoce1779_2|606010|organism=Nannochloropsis oceanica|type=polypeptide|length=982bp
MDPAELQHVLQHTFSSVQATRAAAEAMIVQLRTRPRFYTSLLQTVSDPAC
PRECRQAGCIILKNAIKTQWTSAEEAKVKGQPAPPEAVKEEDKPSLREGA
LAGLLQEADPLIRSLFAECVYHLALTDYPEHWPQLVDTILKALHAQPPSP
LLMHNALLALRKLAKKYEYKPQDRRRPFNKIITATFPSLYSLFKSILDND
SLESAEIQKLLLKILWSATQLSIPSSLSNHTLLQWMELVGHVLAKDLPDD
KQPLDEDERKRWPWWKAKKWAACIATFYDTVAPVLLQPMLNLMCLRSQGR
FVTDRVLHLTLRYAKTSIEMAPTYQVLKPHLDILLFQVAFPLLQQKEDSL
VQFQEDPQEYIRKMLGAGDLEDICYDPKDEALSLLTAAVEKRGKNSPATV
LDAYNQQADPVLKDYKAKDAALLLLGSLHRLLKSRNRPYRPQLCALLCTH
VFPEFSSPNGLLRLRACWMMSRYHDIDYTDPQILVQAIHAVLTCLTDPCL
PVQVEAAMSLRELALLKGVEPLFIPHLPQLVEHYFRLLTEVGSDEVVHAL
DCLIDRYGRLYRPPGREQDEDKALAASQCLDALNTLVQTEMEADIPPSLP
PSLPSSLPPSLPPSLPPSGEFFDFLEAALDLLTALTYYSQGISPLAWTLF
PLLPRVFNSWAYDYLVHMVDPIDNFIHRGTETFLSSRTPEGQDYLNLVLA
MVEKVLHDEEYDRYELAQTMAILKSLLHTCSKPSLDTALPPLLGMVLTRL
DKEVGRGGKRKNSEWGGGRLITSLLEVLASSLLYNTALTLQSWESQPGLA
DHVFGILFTNLKQVHTPFGKKQMVLGLSSLLQLPSSSLPACIRGNMAVIV
QGILPLLHELVEDAKKEGQGDGEGEDEGEDEDGGEEDEDEGEGGKDTEQE
FSDSEDAIDAEDEQYMATLRRLQAKQETRNKEGGGEEGGVEGGEDVGNDE
DDEDEWSDEDDMDGEGREGGREGGREEGRWE*
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Synonyms
Publications