jgi.p|Nanoce1779_2|673965, gene_9288 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|673965
Unique Namegene_9288
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_33:197046..209827 +

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Properties
Property NameValue
TranscriptId674051
ProteinId673965
Product nameSodium/hydrogen exchanger family-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_33supercontigscaffold_33:197046..209827 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006885regulation of pH
GO:0044237cellular metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0015299solute:proton antiporter activity
GO:0003824catalytic activity
GO:0050662coenzyme binding
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL051ncniL051Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO30G00340NO30G00340Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673965mRNA_9288-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673965mRNA_9288Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|673965

>mRNA_9288-protein ID=mRNA_9288-protein|Name=jgi.p|Nanoce1779_2|673965|organism=Nannochloropsis oceanica|type=polypeptide|length=1795bp
MLRLASFLVLALGTSSLGVQAFLAPSLASFSTSSSTRAAAASMRTRDKIQ
MAAGEKALIIQNQGGGHGEIGYHLALKLAKEKGLKVTVLNDKYNDQKQPF
KSYGDLTAAGVEVLSAELATADVKRLLGDQAYDYVYDNNAKNVELASPVV
NLALSQSWPVKDYVFVSSGGMYKAGDEFPLVEAGAVSDNDARKIELFIQG
SGLPYTFFRPQYIYGPLTSKRDYLDWFFDRITRGRPVPLPLSGDQFTTLT
HVEDVAALLASVVDNPKAVNQIFNCATDRYITFKEVVGLVGRAAGVAQAK
DSIVIYDPVEKKADIPKGWWPFRNTHFNVSPEKAKLLLGWAPTHDLAKDL
EEYYRGYVAAGLDKKEISFEVDDKLPSEHARVGAVAVVAAAAAATAVTAA
AAAAAALLAVAAAAAKAAGAAAEKIAKAAAAAAATATTNPTATHTASSKD
VGMGTFVLALTLGILSRAYLSSRIRLPYTCLILISGLLYGFLIYTDVRRS
GPDIFSASSDLWINLSPEAILTVILPILIFGSSFSSDLHLFLQQLTPVLT
LAGPAVLVNTILLGVTVKYILPYGWDWATSFMVASIFSATDPVAVVAILK
DLGVTESLSILIDGESLLNDGLAIVLYSIFSRLVLDEEGFQLSETVQGAL
VLCLGGPVIGIMVGVLASIILGVLLNDAASEITVTILCGYGSYLLADLAE
ASGVLSMVTAGLYLSFHGLGRISARVTASLSSFWAMASFIAETIIFFVSG
LIIADKALISSTIRGTDWLYLIILYLIVNVTRFIGVFLFFPSLARGPYGI
DWRQGLLLSWGGLRGAVSLTLSMAVSQQEAIPLDTRARILFLTAGIVLLT
ILINGATCKLLVQKLRLVNPTQAERELFIRATNLVETKLGIFVERKLKKD
RYLGNADWNVVYRYLPVYTPQIYWYRIMEGKVRLSEEEVEEVGRWKSYTT
QFNEKLKDEIDGLKLSAIRKQIWDGLMQERGRRRRRRKQQQQQQQQQNQQ
QNQREIDPLAASSSSSRFRLLTVLKHVYSSSFHSGLLSPDGLQAFERNLS
LLLTHPDLPLNQWEGLEAHVLLPLRGMQAQERWRRFPLVGALFQRALFQK
LAFFFELAVVFIEAHSNINVKLGELFGTNGAVTRCLEEELGREVLRAKAA
LKEFLPVFPEVIDSVRTEMATRVLLHKMRALLEDAMESGSLEKREYEDAI
REVDSSTPGWYVIVRGTVLAETRQEGKDEGGKEGGKEGGKGEILQNGSVL
GYVESLVGGLEGGREGGREGGKGGWACHSYTAASFVQLLYFDRARLLAEA
GRRWREGGREGGGRGDELLRSLWWVVAALELRREGGGEGGVGVGKCSWAQ
LAGLLQDAKLLHVPEAGRDGGREGGSQGSRRQGLMGALKGVMGVGGRDGG
DGEGESDEEMAMGRNRDYCTFSDQPLVQRQQQQRQQQQDNKHLYQQQQQQ
QQWDEEGGDDTFEVIGREGGRDHLILLTGRLEAVMEGGREGRRNGGEGQQ
RRRRQQQQRQEQETGANEITTQNPTTPPAGAGGGRGGLSVLVAPPAVLVP
NLPIGRWRMGRGTVAFVLPEEKCVALQQQQHQHQHQHQHQQQHQQQQRKG
YGRQTSQSMGCSVVDPPPFETLLQEPDIDGGDDEEEEEEEEEEQQQQQQQ
QQQRQRPQQQQRQRPQQQQQQQQDEGGEASAMRRRRSSSPMDVIVEAPTG
LTTTREGGRDGEREGGKRASRASRDQGGEKDMESGEEEIEDEVEDEVEDG
IEGGVKDEAEDKEEEEVEALFQLRMTRLMSGNETPRSEEDEEQG*
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Synonyms
Publications