jgi.p|Nanoce1779_2|605915, gene_9267 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|605915
Unique Namegene_9267
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_33:141797..143547 +

Link to JBrowse

Properties
Property NameValue
TranscriptId606001
ProteinId605915
Product nameHydrolase, carbon-nitrogen family protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_33supercontigscaffold_33:141797..143547 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0050152omega-amidase activity
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Vocabulary: Biological Process
TermDefinition
GO:0006807nitrogen compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL051ncniL051Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO30G00510NO30G00510Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|605915mRNA_9267-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|605915mRNA_9267Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|605915

>mRNA_9267-protein ID=mRNA_9267-protein|Name=jgi.p|Nanoce1779_2|605915|organism=Nannochloropsis oceanica|type=polypeptide|length=403bp
MQTGRFIWRLRSTHQALVLLSVLAWMLLGLPRAAAFACAARRAAVAAAYT
RARASPALSAFTSVAAFSILRATAGPLTLRSMSTPSSFPSSSSVAVSCST
YGIPASKIKLGLCQMLVSDDKATNIQVAREAVERAAKEGAQIISLPECWN
GPYATASFPVFAEPIPPPGSTAADIDATVSPSLAMLVDVARTNNVFLIGG
SIPEKTEEGGKEGGKTYNTCVVVAPDGVLLAKHRKVHLFDIDVPGRITFK
ESDTLTGGDSITVVPTPYGFSLGVGICYDIRFPELAMIMRAKGCALLLYP
GAFNLTTGPAHWELLQRARAVDNQLFVAAVSPARNPASAYQAWGHSTIVN
PWGEILATTGHDPALVMAELDMAAVEETRRNVPTAQQKRLDLYTTCSEVK
II*
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Synonyms
Publications