jgi.p|Nanoce1779_2|547092, gene_9200 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|547092
Unique Namegene_9200
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_36:203903..208766 +

Link to JBrowse

Properties
Property NameValue
TranscriptId547178
ProteinId547092
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:203903..208766 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004386helicase activity
GO:0005524ATP binding
GO:0003676nucleic acid binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL054ncniL054Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO28G00980NO28G00980Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|547092mRNA_9200-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|547092mRNA_9200Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|547092

>mRNA_9200-protein ID=mRNA_9200-protein|Name=jgi.p|Nanoce1779_2|547092|organism=Nannochloropsis oceanica|type=polypeptide|length=1314bp
MTRRGRGQGRGGGGRGDGESSNRFGEGGGSSVASSQQSMAGSSTSSSNST
SSTSRPPPPPPPHPPYQPASSRPSGKTSKNGSKGIRDTHGPSAISEAMRI
SFSTQLNQLREDPSKEELSFPPTLDNIHRKFLHALAGQLGLVSKSSGKGD
GKRFITVKKKKKAAAAAEEGGKNGGGGHRAAVRAAEKQQGPRTTSSSLTA
TAAIASNSKNTARNQGKKQQGYYDPAAQEQLLIKRKEGHAAAQAKKEANR
KYQAMLTARKALPAWQHSSLVVDLIKTHQVVIVSGETGCGKSTQVPQFLL
DDEAIGPTLKMAVTQPRRISAISVAERVASERMEEVGKTVGYHIRQESEF
SEGSQVVFMTPGVLLRMLMGDPELREFNVVMIDEVHERDKNTDFLLIILR
DLLLRHRSSDLRLILMSATLQTGKLSAYFGGCPVATIGSTCYPVQEFYLE
DVLLQTRYLQKLGLVKDGSSGSSNSKSGSSKKAFGTAGKGGGQGDNALLR
ALCQATPVYACEMCGQKGFRSPEEYGTHIVLCDGVVIELLRDLEGQGKEG
YVPEYEDWGETPARINSSGPLAALARGEEGGFISTVEDVGEGEEVMREPH
RHSALECPIPAATEVEGQEALRAYQYAFDDELVDYDLIQSLLVYIVESGY
RPGAILVFLPGWDDISRLRDALRRDPVLGRADKFLLLPLHSGIPSQQQRE
VFKSPPAGVRKIVLATNIAETSVTIDDIVFVVDSCRVKEKNYDPFLKLCT
LQPTWISKASARQRRGRAGRTMAGVCFHLCSRRRYESLKEFKESELLTTP
LEELCLQAKLLGLAPGYDPFERHGDSIMSFLGKALDAPHDLSVKNAIDLL
VQIGALTAREQLTDLGHKLARLPLDPRIGKMVLWGQLLGCGRTALKVGCA
LAYRDPFVLPLTADGKAKAATAKMDLAGGTMSDHLALLGALSGFESAAER
GGAQASSGYCDRYFLSKSTLTTVVDVVKQVGNELAGMGFENPLFWSSNSS
ESKISPVVEHDRNLALLTAVVCAGLYPSVASRTVGDVNFTTTCQKKAKLH
QSSVNYHPGSRFTRASTAEAHRAMGGGPEFLVFSEVVRTPSIFVISNTTP
VPVVSLFLMCGDLKVRGMKGLLSGEKGRQEGNLGEQALLLLDDWITFRCP
KEVALQLLALRLRLQDAFLVFVKHPQARLSETCQDALRSAVRLLTLENHY
MPAGKAAAAVFGGGGRNGLQQLHLGGRGRGRSRGSGCDSAYGGMGRRGGG
GRPVGGRIGGGSGGRGGRVDNRPILVSPLAAAAARAGGLQQQQLSPSANP
NHGGYRAPQPPRK*
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Synonyms
Publications