jgi.p|Nanoce1779_2|658389, gene_9003 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|658389
Unique Namegene_9003
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_30:156022..174054 +

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Properties
Property NameValue
TranscriptId658475
ProteinId658389
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_30supercontigscaffold_30:156022..174054 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005085guanyl-nucleotide exchange factor activity
GO:0005525GTP binding
GO:0051020GTPase binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL048ncniL048Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G03050NO13G03050Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|658389mRNA_9003-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|658389mRNA_9003Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|658389

>mRNA_9003-protein ID=mRNA_9003-protein|Name=jgi.p|Nanoce1779_2|658389|organism=Nannochloropsis oceanica|type=polypeptide|length=3050bp
MEVKTVKRQSLFEWKRQEDSLPTAVLTALTEFTRAPRIVSLPSPTIYGLD
DAEEGEAGKFLSSVSEVEGVSPPNFPNDGLGELPSLPPSLPSSSTTRPQA
TGAGEGDEEEEEDLDPIRRTNPQLLQHYHPTYKAPNRLAEEAKARDDGLR
LYWDRPYGYDWVQVQCKEVSFRVGEIEPLWCSLALYWLDCRVEKQHQVNV
NLVNSGRITEVFSFEATSVAIQEKFAQVLHSLSSPCSPSSDPTSPPTSLP
PSGPASSPFLEAKNAMFSLSPEQRRSGLFLVLQVSKVLQGDPDKVLEPYS
KGKGAAASLSSKAHEAAERLGLYKQPVAFGFHQLFTDKGELASPINMATT
TTTATLGEQNSSSSSTTTTTTTNSSSSSSRMAMLSLPFYKQKTGLSDSQL
MNQIAEILSEAPTAKERTMEGRCVIVVEDLGNVKDVLTKVTPRPLLIDST
YTARIKALPPTASGPGSIAKGGGGNKPSASSSLPPSLTAPARRLVREIRT
LPLWNFNSIFNPETGPGNRPRSVPINTAFSNVLYLYPPLAGQEPIELRAL
RSSSSTFSSPGGVSSSSSSSSSSSLPPSPSHDRARATSNLSVSYHTRNPQ
LNDEVKLRLPDVLTPAHHLVFSVYHVHVKKQSSILSSLKQAVGGGSSSSS
NNSSSSSSSRNDDAEKKSSATLIGLGSLPLLYHTDTPSSPLLGDNKGPGC
LLPDALYTVDIRPVKPSKAGREGGTGGGRLSPMNASLGSAVVEEEEGGDY
DFEDGRPPSSSSSSSSSMMSLRLGSIAQSSIHAQDEKLAKFFHYQPKPYA
ACHGAALQLQQQQQQPQQQPPTSEGSKRGSRRLGWGGRERGRGATMGEQE
HMVMLEGCMRSVIEVGDAAVAGHFLPITRQLLRTLCGGSGGTLTASSLIW
ADPLAMPRLRVLTFVALLHTFTKLMRGWSPLGLEETVSSSSSSSASGGGG
GSVPRLSMVGGRGGGSELNILRAYADLVFDEDHVALIGTAAAAAAAASES
ILTAAAAAAAAAAKRREGGGRGGAGEDEGEGEGEGEGGGGHLSPSRTRHG
LVDRARAKWESWTAPPDRRRGGGGGKEVGREEGQSMSPARRRERKHGGKE
GCRTLSSSSTSSDTSMDAVSAFVKLVEGEEKGGKTGTKQKQQQQQQKSRK
GKDASLSMSSSSGLGLSSSYFSSSSSSTSSSSSTSSSSSSRRCTKVYRLT
GSRERWLHAMSLQLQQQQQERQQPEGGRAFRWWPWTYEVLIPQWRALLRL
YQQGDTKAAAAATAATAAAIPTAASSSPSTQSSPRVSFSSKRQQQQRMGI
KEEAKEGGKEDADGPALFEEEKHAYPFPRDAFPPDTRKAAQVQGQALFGL
IKKSLALRIHHEGLSPVVLLDDDTMWALQDLVAALASESIERYASGLWVS
VDLNKALAIFLRDLLLLLHPSQVALLVSSYYTTLRTCTRTEQMEAKFEFL
SILLMHDSVPFNKPWLFDLPTDVAITQEGREEGVIEGPATHWLVKLTMDE
CIGALSHPEAIIRSRGISLLRQTLVSHAVNPDYREAALREGVAAMYLPLI
GHLVQRLESVQKLSHTAADRRELLACLLYVLQNAPQRLLRCLWQHLLLPP
SSLPPSSCPPVPLPEDGGASTRREGRREGGREDEDAVALYLVQDVAKMIL
VSGTSSSSSFSSSSLPSSTSSSSSSSSRRHSGSSTSTTTTSSSSSSSSSS
SSSSSSSRKSVQQQARTTGGLSLTQTLSLTTYLTSNTTSPSLPSSLPPSL
PLPKGVLRFLTLLELAIDTFEYPYKGSKSQQSSSSSSSSSSNSSSGGAGG
GGGRGGGREGGRGVIDTAQALEVLVPGLRPSSSSPSRRPSGSSSSSSSSS
STTRATTTAGAASSSSSSFPSFSSYTNPLLSPRGSARTKNEGGKEGGRED
GQASSLDMPPPTGAEALQALNTYLLDNRGGRRAGTHLQAGGGGGKGGGRE
GGREGGMGGGGGGAGGYLMGKGGGGDQAMRAWKAQYQKHGDCLNKYSAAL
ARVGEVPPLTLIRSCKWVCHEASQIILETSMVLADVAVAVLDPPPSFPSS
SSSFPWVQASALHRRREGKGGREGGGAKTLWEYKGSVQRLPRALKTLTAA
MYKLLLHVLTTSQSDVTLIRTLQDSNLLMEAMGVECYLDSIGHHKSDWLK
QIVIYCNHTRPSLRSASRSFLVSLFHLTFLHSGSITRVRLPFLHVFCHAL
DGIWETLDQGKHLGGHESAEIVRQKAFTLLGPLRRCLREGIEHPLRTLPP
SHPSPNPAFIERLLLLFHHAHLLTEAYVMNLLLDNMAQRYAQSISSQRLK
SKDLIAQGESSGLMDEAVIQELLLRTATEVFDIQESPEHRIYWLQRLAQL
HGMRGNIAELGATQISVYYAFQQIYHAYASLPPSLPPYFSTLPSASVALP
AGTAAVLATALRREWKQQQQQQQQQERRRGGGREGGRDRATPSAAVLTMA
SIDPKSVLPRYHLHRPKEEVKAQLLEAASIAAAQFRSAHFPLLALRCQQK
VLTLQTEGGNGPANMTAMAAVYTDMADTLSQAAAARASLDYLGREHALGC
FYRVAIFGPGLGQGHCVKEYVYRLKARKHLSEFQGMARTRREHLSHLWAG
LRIRREHIKVVPDAADEKALMEKEKDMEVVYVKITSIKPMISPPSASSSS
SSSSSSSSSSFSSRFLIEEAKAGDNSLRLIAAAWGGMDGRKGGGRGEGDF
GADGELGVDRFYYSVPFTTRGAAQGSTGEQFKRTTELQVGQPFPCCLSRQ
LVCRRVVTIQTPVECALDDVKQRCRVIHDLLSKPTERVNKNAMMQLLQGS
VVPQVHGGAVEFLAARASLRAQLLDFLHLCFALILKSRHVLGIVRKHSST
SSILPPSSSSSTSSSSSTTPFLSATMTAATSSDASSLRPSFPASSASSSS
AAFSNSLSSPPATMSLTFPHGGGAGGGGGGGGGGGGGGGGGGGGRGPVTG
VGIGGKEGGVTGTVTTSITSTMLAESTIAVTGAGGTGLMQADPSKMVDAA
TIMWQKEIEAGFGSMLAKLLPMLREGGREGAGEIAELMRMARELDTKVT*
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Synonyms
Publications