jgi.p|Nanoce1779_2|626293, gene_9001 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|626293
Unique Namegene_9001
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_30:148149..150935 -

Link to JBrowse

Properties
Property NameValue
TranscriptId626379
ProteinId626293
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_30supercontigscaffold_30:148149..150935 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL048ncniL048Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G03070NO13G03070Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626293mRNA_9001-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626293mRNA_9001Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|626293

>mRNA_9001-protein ID=mRNA_9001-protein|Name=jgi.p|Nanoce1779_2|626293|organism=Nannochloropsis oceanica|type=polypeptide|length=817bp
MAPPFPHFPSSASLPASGRPRSASFEPQDMCRPQGVLHDGLPSYTHRQVK
AADRIPQPIYLGIEVEVFETQDEVRYGLCTHDGSYTLDYYEEVIDVSHCN
NTTAKVEYFEEHIIHKLKEYQASMNMKAHVIGLGLRVCNTMCFMKRGCAT
MCVDYGRERIFRVYGSDAPSLSSRVWLEMDAIPYVMRSKGTTLDERASTA
VRQAVLTLSPQYPGNIPRVLVGYRNEVEVDCNMDIHLYDLEDYRKQCSEG
TWHAVLAMADEIRRRHIKVSFFNSTPQGGGVALMRHALLRLCNHLQVDVH
WYVATPSPEVFTVTKRKFHNVLQGVAPPDVCLTEEDKAKWLAWTKVNVER
HWDDPDGPLMTSDVIIIDDPQVSGLIPWIRQLNPEAKVVYRSHIEIRADL
IRDSPQGPQAQTWDFLWSAIKQADLFVSHPLSNFVPDCVPMENVVMMPAA
TDPLDGLNKPLDDFDITYYQQVFNRICYDQGSRRVDWNCPYIAQVARFDP
SKGIPDVLLSYRKLYHKFLDALDDKNSGAGNRASDQVLKGSSIDVKNRDC
EDRDDFWGFDVEQKGRGWQPLHKQLCMEGLSLPQLIICGHGSVDDPDGTW
VFEEAHTILDQEDFRDLLPHVTIVRIPPCDQILNVVLRGALCALQLSHRE
GFEVKVTEAIAKGVPVVAYAAGGIPFQIRHGENGFLVPVRDTDAVAEHLY
NLCTDPGLHDRLSKSAKENVGEEFFTTFNWANWAYIWLKVLDKPRAAPTV
EEVIHVKNKAAKRRPGFEVLIAPPPLLVEVSKSGEGVIGDLPQVLRLPKI
QTEVVVRDISDLEKAK*
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Synonyms
Publications