jgi.p|Nanoce1779_2|604552, gene_8934 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|604552
Unique Namegene_8934
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_29:254752..257166 +

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Properties
Property NameValue
TranscriptId604638
ProteinId604552
Product name2-oxoacid dehydrogenases acyltransferase (catalytic domain)-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_29supercontigscaffold_29:254752..257166 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004742dihydrolipoyllysine-residue acetyltransferase activity
GO:0030523dihydrolipoamide S-acyltransferase activity
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL046ncniL046Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO18G02350NO18G02350Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|604552mRNA_8934-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|604552mRNA_8934Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|604552

>mRNA_8934-protein ID=mRNA_8934-protein|Name=jgi.p|Nanoce1779_2|604552|organism=Nannochloropsis oceanica|type=polypeptide|length=780bp
MRPLTLTGAGALAVVLLAQASTAFIPRHAAVRNLFASRPQQQQHASRVVL
SMVEAIEIAMPALSSTMTEGKIVEWTAKVGDKIKAGQTIMVVESDKADMD
VEAFEEGFLAKIVFGDGASAPVGATVALLAKTKDEVAAVAAMTPGAAPSA
AAPAAPTAPAPAVTAPAGGAGGLGVPTNEISMPALSSTMTEGKIVEWTVK
VGDKVKSGQTIMVVESDKADMDVEAFESGYVAAILAKAGEATPVGAPCAL
LVDNEADIETVKAALAGGASVGAAAPVAATAAAAPAAAAAVPAGPEKPAF
DFSEVSMPALSSTMTSGKIVAWTAKVGDSIKSGQTVMVVESDKADMDVES
FEGGFLASILTGEGQTANVGAPVALLAAKKEDVPALQAYGQALKASLSGA
PTPVAAAPAPAAAAPAPAAATAATTVATTPGERVVASGYAKKLASEAGVD
LTAVSGTGLGGRVVSANVIAAAGGKAAPKPLGYQSPAGAATPLGRKLAEE
AGLDLKTMKGTGEFGRVTADDVLIATGKKSPIKKKAAAAAGGKPAKAPKP
APGPMPTGIKPMDGMMKAVAKNMEKTLDVPIFRVSRLITTDKFDKLYAEV
KGQGVSVSALLAKAVAITLARYPILNAAYDPSGAIKYNADINVAMAVALD
GGLITPTLKNADKMDLVSLGAKWRELVKKAQEKRLTPDEYTTGTFTISNL
GMYGVSAFDAILPPGQGSILAIGGSLPTVVVRKDGSFAVQKQMTVTITCD
HRHIYGADAAEFLRDLAELMEEDVESLLD*
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Synonyms
Publications