jgi.p|Nanoce1779_2|532932, gene_8784 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|532932
Unique Namegene_8784
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_28:142732..146736 +

Link to JBrowse

Properties
Property NameValue
TranscriptId533018
ProteinId532932
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_28supercontigscaffold_28:142732..146736 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008094DNA-dependent ATPase activity
GO:0008186RNA-dependent ATPase activity
GO:0015462ATPase-coupled protein transmembrane transporter activity
GO:0017116single-stranded DNA-dependent ATP-dependent DNA helicase activity
GO:0042623ATPase activity, coupled
GO:0042625ATPase coupled ion transmembrane transporter activity
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
GO:0005524ATP binding
GO:0016887ATPase activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL045ncniL045Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|532932mRNA_8784-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|532932mRNA_8784Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|532932

>mRNA_8784-protein ID=mRNA_8784-protein|Name=jgi.p|Nanoce1779_2|532932|organism=Nannochloropsis oceanica|type=polypeptide|length=1280bp
MRKKKIGNGWLLFGALFHTYPAIFISISFYQLVASLCEFGVPLCLKYLVE
FIGSYTQSEPIPPEAYAAAAILFTCPALAAFANVQQYCSARRLIFRWRAA
LIGLVFRQTLRLDPAVSTYSSGQVINLCSVDASNCDALRYFPFLWAVPLE
VGISIALIFWVLQCWISGLVGVVLVAASVYITVKLSERLRQAQRTLMQRK
DVRLSLLGECLQGIRILKLLAWERVFLGKLEGARATELKALRRFILIRCL
ISILWTSTPVLVSAATFLFHTLILKKSLSVSQGYATLALFGLLRSPLANL
NTYLNSYVKAQVSFGRLERFLFEAPLLQRYEGTLLTDEMEKEDDDEEEED
EEESGGGRSSFAWGDSTQGRGQLLLPNVDLHVQPGELVCIYGPTGGCKSS
LLMALLGEMRRVGGEGQFSNGNSASSSSSSSKCWGGRVSYVAQRPWILNG
TLRDNILFGKHLDSVRYEAALEACALRQDLEALEGGDLTEIGEKGVTLSG
GQQQRLSLCRAIYQPTDVLLLDDVLSAVDAHVARHLLTACLKGPLLEGRT
VLLVTHQISLTLPVADHVLVLGQDGCVVAQGNPKDNVKVMVELGQYAAEA
EASGGVTAAEEAKEEGPDYLGGSKNKVDEKKKLQAAVPSVIQPKSLLTAK
GQGKQLVTSEKKAEGYVKLRVYMAYILAAGGFLLAGVALLTFAGVEAFNY
FQNKALGDWVEKLEMATKNEDKRAGVYPYIYFSLASIAVVVAQALLTSCA
SLMASRRIHHNMARRVLRAPMSWFERTPLGRIQNRFSSDMDTIDIDAMDT
LSKFLSRLAAILTITAIILHAMAPLILGMIPILLASSYFGYIYQKSAREL
KRLDSVTRSPIYSHFIESVAGLPTIRAYQQQARFIAESDARIDTNSCVYH
HLWSTNRWLAVRLQLLGAAIVGMVGVYILFTLGTVPKTTAALVLLYCMSF
SDSMNVLIRQQATLEMDFNSVERAAVEYTLELEQEKAAINPDCRPSSASW
PAQGEISVSNLRLSYPGTETDVLQDVSFHIPPRTKVGVVGRTGAGKTSLI
AALFRLVEPKAKSGLVIDGQDILQLGLEDLRGRLAIVPQESILFRGTIRS
NLDPFQEFLDVDLWAALEKAQLKGRVVKSLEDAVGEGGSNFSVGERALLC
FARALLRTHAGGRGVLVLDEATASVDPENDARIQEMTKTQLSNITVLSVA
HRLRTVAFYDLVLVLQQGQVLEYGPPLTLLEDPQSAFRAMAQQTGEFEAL
MAIAKKASCRSSEKGSSIDGGKNDGGVKV*
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Synonyms
Publications