jgi.p|Nanoce1779_2|219653, gene_8781 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|219653
Unique Namegene_8781
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_28:132071..137446 +

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Properties
Property NameValue
TranscriptId219739
ProteinId219653
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_28supercontigscaffold_28:132071..137446 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008094DNA-dependent ATPase activity
GO:0008186RNA-dependent ATPase activity
GO:0015462ATPase-coupled protein transmembrane transporter activity
GO:0017116single-stranded DNA-dependent ATP-dependent DNA helicase activity
GO:0042623ATPase activity, coupled
GO:0042625ATPase coupled ion transmembrane transporter activity
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
GO:0005524ATP binding
GO:0016887ATPase activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL045ncniL045Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G01770NO25G01770Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|219653mRNA_8781-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|219653mRNA_8781Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|219653

>mRNA_8781-protein ID=mRNA_8781-protein|Name=jgi.p|Nanoce1779_2|219653|organism=Nannochloropsis oceanica|type=polypeptide|length=1602bp
MCDLVLTIIYVVRACTFFYHGKDPPGGVRLLLVGGGWLLLSLLEEAPALG
NGKMSGQVTVTSCLGTSAVQWPRSPAWLTLALGYVFYFALTIHPFVVLAD
KEKGEGGKVGFAEGVALIEIALAGLVLLLLVTEAFVALVQTRRYVNATHT
QHIRRRISQAAGECFYSFSSLSSSNVVDGSGRRRSSESISASASASQFHD
TKTKHKHQQAATSSSPFSLFRLFTKSNFAPTAEQKASLASTLLFMWVNPI
LMTGKKKILAVDDLHPLEQEDRSAYIWRAFLPHLRVLEEKYAHTYRHTTG
HDNAMRKKKIGNGWLLFGALFHTYPAIFISISFYQLVASLCEFGVPLCLK
YLVEFIGSYTQSEPIPPEAYAAAAILFTCPALAAFANVQQYCSARRLIFR
WRAALIGLVFRQTLRLDPAVSTYSSGQVINLCSVDASNCDALRYFPFLWA
VPLEVGISIALIFWVLQCWISGLVGVVLVAASVYITVKLSERLRQAQRTL
MQRKDVRLSLLGECLQGIRILKLLAWERVFLGKLEGARATELKALRRFIL
IRCLISILWTSTPVLVSAATFLFHTLILKKSLSVSQGYATLALFGLLRSP
LANLNTYLNSYVKAQVSFGRLERFLFEAPLLQRYEGTLLTDEMEKEDDDE
EEEDEEESGGGRPRVVSLRPGEVILHGAQGSSFAWGDSTQGRGQLLLPNV
DLHVQPGELVCIYGPTGGCKSSLLMALLGEMRRVGGEGQFSNGNSASSSS
SSSKCWGGRVSYVAQRPWILNGTLRDNILFGKHLDSVRYEAALEACALRQ
DLEALEGGDLTEIGEKGVTLSGGQQQRLSLCRAIYQPTDVLLLDDVLSAV
DAHVARHLLTACLKGPLLEGRTVLLVTHQISLTLPVADHVLVLGQDGCVV
AQGNPKDNVKVMVELGQYAAEAEASGGVTAAEEAKEEGPDYLGGSKNKVD
EKKKLQAAVPSVIQPKSLLTAKGQGKQLVTSEKKAEGYVKLRVYMAYILA
AGGFLLAGVALLTFAGVEAFNYFQNKALGDWVEKLEMATKNEDKRAGVYP
YIYFSLASIAVVVAQALLTSCASLMASRRIHHNMARRVLRAPMSWFERTP
LGRIQNRFSSDMDTIDIDAMDTLSKFLSRLAAILTITAIILHAMAPLILG
MIPILLASSYFGYIYQKSARELKRLDSVTRSPIYSHFIESVAGLPTIRAY
QQQARFIAESDARIDTNSCVYHHLWSTNRWLAVRLQLLGAAIVGMVGVYI
LFTLGTVPKTTAALVLLYCMSFSDSMNVLIRQQATLEMDFNSVERAAVEY
TLELEQEKAAINPDCRPSSASWPAQGEISVSNLRLSYPGTETDVLQDVSF
HIPPRTKVGVVGRTGAGKTSLIAALFRLVEPKAKSGLVIDGQDILQLGLE
DLRGRLAIVPQESILFRGTIRSNLDPFQEFLDVDLWAALEKAQLKGRVVK
SLEDAVGEGGSNFSVGERALLCFARALLRTHAGGRGVLVLDEATASVDPE
NDARIQEMTKTQLSNITVLSVAHRLRTVAFYDLVLVLQQGQVLEYGPPLT
LLEDPQSAFRAMAQQTGEFEALMAIAKKASCRSSEKGSSIDGGKNDGGVK
V*
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Synonyms
Publications