jgi.p|Nanoce1779_2|216023, gene_8710 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|216023
Unique Namegene_8710
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_27:226853..232134 +

Link to JBrowse

Properties
Property NameValue
TranscriptId216109
ProteinId216023
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_27supercontigscaffold_27:226853..232134 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL044ncniL044Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO27G01210NO27G01210Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|216023mRNA_8710-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|216023mRNA_8710Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|216023

>mRNA_8710-protein ID=mRNA_8710-protein|Name=jgi.p|Nanoce1779_2|216023|organism=Nannochloropsis oceanica|type=polypeptide|length=1510bp
MLTQNNYALGAAREFFAAQTLFLHGSIAYCMHAYMVRKVTALQLYRKPRV
ILMTLGSVIYLAIRASLAFGLRSELFGFRVGRLVLTDLLLIPLCLSFITW
WYMGVMRILRSPAPTAAAAAATAAAATTTTTTTTTSTPRAAAAAATSPTT
TIIGRGEIYGGKQTCLTGEGHAGQASWGKDDVMLAPRENELRQVGEGGQE
EGEAGHSVRQESSLAVQPLATANSSATRSAPSSFSVSISASSSFSSSSST
PNRPHIRGPSRRFSTSSVGSNRGQSFQPALNRQLLKRLTFILYVIVGVWL
MVIAMDLIVWIRHLLDLPPRAAPLLIRSTILCSLGLVDALILGLDLPNGC
CLSSSSSSSSSWICPWLGWLVNRRNGKEEEEDEEGEEEDEEEEAFGVKED
DLERGVGVRQGGKDGKRGVGGWGAGVLARPMIVRMNSHPTLNFLPTQPRD
KGVTFSPSSHPLPTSSSPEDEALAIVAAAEEAVSARHKQQQQQQQQQQQQ
RQIPNPSVSSVSNNGNAPRPPSSSSTTKNLRLLVTTYNMGGVNLDDPATF
LSLQASLPRFLPPGLDLYAIGVQECTCFPTLRLVLHRYLGGPSAYALFHD
KIGDAVVLHGYVGLIIFVKAADVTAGAFSLHHSTRTRLATGKEVMGGWLR
IPNKGVVGLSARYFDTTVAFVTAHFASDKHGKNMLMRRNRDARMMLRRLG
LVWGGDGVAVDVHHLHHQTFFCGDANYRCLTSPRDVLTRVALSARLSQAR
LLLPSSMPPSSMQGVGKWDGSSGGNRSRKPLNWREVQYARLLQGGKDGGV
EGWEEEGEGGAAMPLYPPYSSLSIPLNEVSMSLIETRNEGIKEEGKEGGL
GATLRRLFRSSRALDSSSGGSIGRTMRRNSSSSSSSSSSSSSSSGINDNG
YSSISASDSCLVRGETQGAGEGAGSRKLDEEEGGAGKGRQQRDHAVNRYA
SQSGDVGGDAELQVPVPPTSQISSRSPSISSASSSTSLPASADFPPLVHP
SNPSATTSVPALATSFSLASSLSSSSSPWAWVRTLDELHLSRQQRLVFWG
WREGTIAFPPSYRWHRQKGGKEGGKKGGLAGDFTSVERLVARAYTTRTTA
KAPAAVVAPTPSSLPLFSQSSFSRVRSSNTPAATTAAAPPLLLPSGSTVE
KDLRPGDDAEEDEADLRPDEEDEDEDENADELEKDARVIRTPSYTDRILS
HSMPGQGQLLRLLHYDMNDEIELSDHRPVVATFSLTVDGSVKGFRSTSLN
GKERGESVAEDEGEEKDEGQDLAVFTFTFRRPHVEFFVPPRAGEEEEGSK
GAKITKNGGGGGVTSSVSPSPHTVVFLFPLVPEDPVAEERLASALGEALP
SVPLLAPSRGALPSTSPFSTLRQRGRSGANGRGDGGGDMNSSSGHGRSGS
WGRSRNLTASARRDVRWGGKGFPVRFETVASPKFSQHMLIRLSDAKGWDL
GECVVPVSVAFFDDQAEEGRGLGGGGRKEQSRAMRLPLTKGGQFQGWLCF
DMRVTTSPL*
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Synonyms
Publications