jgi.p|Nanoce1779_2|603607, gene_8686 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|603607
Unique Namegene_8686
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_27:166831..170827 +

Link to JBrowse

Properties
Property NameValue
TranscriptId603693
ProteinId603607
Product nameABC1 family-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_27supercontigscaffold_27:166831..170827 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL044ncniL044Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|603607mRNA_8686-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|603607mRNA_8686Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|603607

>mRNA_8686-protein ID=mRNA_8686-protein|Name=jgi.p|Nanoce1779_2|603607|organism=Nannochloropsis oceanica|type=polypeptide|length=826bp
MHTRHASRHNGLGTAFTTSSPLPRLVILTLGVALILAPCCQGWRHLPTLP
LWRSSSVIPRHATTESSSEFISASRPTNYQFIQYDGDAISKLAVREWWRV
LARFRDVGLPILSWLTLVNFDEMMGQSGSEDRKRIHARKLREMLVSLGPV
FIKIGQALSNRPDIVGPIYVRELEKLQDNVKPYPDHIAIQIVKEELGRPA
DEIFDFEGLPGPVASASLCQVYKARIRATGQLVAVKVQRPNIFRTAEADL
AILRTGAGYLQKSRRLRSNLKAIVDEFGETLWEELDFIHEGENCKKFRAY
YAAPVLEGVTAPRVVDELTTKRVLTMEWIEGTKLPWGDDAERLIGLGLEC
STYQLLEKGFLHADPHAGNLLRTTNGDLAYLDHGMLTQITEEQRFALIKA
VSFLYNKEFDKLAGSFVDLGFVSKDGDPSALEGFGPALRAAFTNASTSGG
DNSLMDLNFAKLSANIQDVAYRFPVRIPPYWSLVIRTLAICEGTALSFNP
RFKVIQAVYPFILKYLLKSSGTPALRLALQEILLVPVEEPPDRWGEDIYT
RPGRTRYKIRWSRLERMLEASSRPVNDLLSPQATAATAAATSTAAVVVGV
PPEGGGGGVGVGVGGGLISNQETLDLILAYILSDNGAFLREALIEDILGA
LDDANLVVLRGLSLLSGGLIPPPSAFPDKDRLAVVGSLLKNLRQMAAERG
VSSLLPITTFPTTAAADAAATTAAATGSSRRPSAIQAQALADLSRQVLAV
YTERQATRALRGVFHRVEKMLHSPSNLNSASRRRQQREKEKQQQQQRQLL
QQQLGGERGRVAVSSGMLVSGKRQL*
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Synonyms
Publications