jgi.p|Nanoce1779_2|626258, gene_8659 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|626258
Unique Namegene_8659
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_27:91616..98577 +

Link to JBrowse

Properties
Property NameValue
TranscriptId626344
ProteinId626258
Product nameintron-binding protein aquarius
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_27supercontigscaffold_27:91616..98577 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL044ncniL044Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO27G00670NO27G00670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626258mRNA_8659-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626258mRNA_8659Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|626258

>mRNA_8659-protein ID=mRNA_8659-protein|Name=jgi.p|Nanoce1779_2|626258|organism=Nannochloropsis oceanica|type=polypeptide|length=1623bp
MGGAPSAKRGRVAGSAQRGRGGGGRGGGKGGGGGESGGVDRLVALAQQYW
PNKSEPLKNKFDSSVVSVIYNEEIGPEAKQGGREGGRERGQQGKLQGLEF
SAYLEAYLWPFFEGGGQRELESSKEHVLSIVLLVCQKFKEGVPAWEALGG
ARDGGEGGGGEAATATAAAKFQSFFLRILRLYLDSPLLASTSHPSSRCPG
TVTGKEKLLLLLFLIHAFQSLEEPMVRSCVLRLTSLSLWEALSEGRRKAE
LERFPQLKRHWLHLQKGKEGGKEGGVEEEEFDVFGSTFLPKAIDEFLAVV
QYLPPYLPSPPSPTFLLPSPATADGNGRTSTTTTTTAAGAAAAPRLLLRF
TERFLELLIDLLAQLPTRRFLKALLLDKHLSVRLSLAPFLQHQELPEQPN
QQQQQQQQQQENKLALQLFSTFKFYLSFEINEHTGLPMTDSEMASIHFSR
THVLQRLAFKYFQNKLKDLAFASSAAVGDPALLPSFLARLSDDELRELAR
RLRLVPEEEVGGEGGMEEGREFYVELLVEWHGKRQSMIQEIQERPLYPNE
QVLWDPNVVPTEGGKEGGVDGLVLPEGPLLALPKLNLQFLTFVDYLLRSY
TLFRVESAYEIRGDIMTTIKYLQPQVAGPGGEGGREGGGVYFRGWARMGL
PIGPGRGGRGGGGVVVTEVKKPNLGERVPGGVKAEITVDLREGGREGGRE
EWDQLREHDVVFLGRRGKGEGRGGRGREDEEAQAFCEEFGIKYVRGAEIW
EVRDGAGNILNDPSGRPGRENGKGGGGPVGTLRTYKVFLDPSQYHMDATN
EGGREGGAAGIYEGMNLLIRRNAKENNFKAVLETIRGLMTTAYVGKAVPP
WLHDVFLGYGNPAQAHYKSLAIEGQLLQGVDFGDTFLSLDHVKEAFPGQE
VRVEGEEEEQVAGEAYPALTFDFKEGEGGKEVVVAHPYRAPNPGPYPMDY
PEKNKVRFTPVQVEAIRSGMNPGLTMVVGPPGTGKTDVAVQIISNLYRSF
PLQRVLVVTHSNAALNDIFEKLRGREIDPRHMLRLGAGEKELRVEGRGEE
GGGYDFTKWGRVNYTLARRLELLGEVERLAKSLGVEEGEGGGAGYTCETA
EYFRLYQVQSRIEAFEAAIEDEGREGGDAGMVASRFPFTEFFKTAPQPLF
GGREGGSGGGRGGGDLEVARGCFRHLNRIFEELADYRAFELLRHHGMRSD
YLLTKQARVVAMTCTHAALTRGKLVELGFKFDALVMEEAAQILEVETFIP
MLLQEVDPIEGCRLKRVVLIGDHHQLPPIIQNQQLQKYARLDQSLFARFV
RLGVKTVQLDKQGRARPSLASLYAWRYSNLGNLPNVTSLPSYLLANAGFA
HTFQCVNVEDYQGQGESQPSPYFYQNLGEAEYVVGLFMFMRLCGYPAEKI
SILTTYNGQKSLIQDVLRQRCGGGGFWYGMPLAVETVDRYQGQQNDYVLL
SLVRTRSVGHLRDVRRLVVAMSRARLGLYVFCRLELFEGCLELAPAFGRI
LTRPSVLEVVPEERYGGREGQVARKENEGPAPGMGFRVEGVEHMGVLVQQ
MLAGVAQEQEQQLQQQQQRQWQQQQQVLLAQQQVREQQQVREQQQQQQQQ
QQQQETPALMPPMPLEEGEERE*
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Synonyms
Publications