jgi.p|Nanoce1779_2|532793, gene_8574 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|532793
Unique Namegene_8574
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_26:241250..243622 +

Link to JBrowse

Properties
Property NameValue
TranscriptId532879
ProteinId532793
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_26supercontigscaffold_26:241250..243622 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
GO:0005524ATP binding
GO:0016887ATPase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL043ncniL043Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G00870NO25G00870Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|532793mRNA_8574-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|532793mRNA_8574Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|532793

>mRNA_8574-protein ID=mRNA_8574-protein|Name=jgi.p|Nanoce1779_2|532793|organism=Nannochloropsis oceanica|type=polypeptide|length=618bp
MSDGTAAAGTTFVRLDKINVIFRNQEVIKDASWGVQTGERVGLVGPNGGG
KTTQLKVLAGELDPTSGEVLKSSQNVKIAFLRQEFTDELDLARTLKEEML
SVFGEEQEILTKLRALEGRLEDATSDMDQMNEILAELAETQQEADRRGAY
ALDTKVEKIMDMMGFAPSDAQLPVRAFSGGWKMRIGLGKVLLQEPGVLML
DEPTNHLDLDSVEWLETFLRTQTLPMIIVSHDREFLDRVCTKIIDVEGGE
TVSYTGNYSNFIKQKKARLEAWQKAYDNQQKKIQEEKDFINRFRANSARA
MQVKSREAGLEKLMKGDDLIKRPPFQGTQFRFRFPPGPRLQGEVVAIEHM
KHGYGNDALFDGASLTVEKGHRVAIIGPNGVGKSTLLRLVMGLEKPTGGR
AGITAANALANYFEQNQADALDLDLTVDETIMSASSTESYNQLRALMAQF
MFKGDAIYKKVGQLSGGEKARVALCKMMLKPGNLLCLDEPTNHLDIPAKE
ILEEACRNYDGAILLVSHDRYFVSQVANRIVAVEDKRLVVYEGDYHYYMQ
KNEEVKGKIEGRYVDGVSGIRQAPKAEEGRDGGKVGKEKGKKNFGGKAPG
ISGRKEKGVKNAKRMTL*
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Synonyms
Publications