jgi.p|Nanoce1779_2|641966, gene_8569 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|641966
Unique Namegene_8569
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_26:231105..233834 -

Link to JBrowse

Properties
Property NameValue
TranscriptId642052
ProteinId641966
Product name24-dehydrocholesterol reductase-like
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_26supercontigscaffold_26:231105..233834 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0050614delta24-sterol reductase activity
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
GO:0050660flavin adenine dinucleotide binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL043ncniL043Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G00840NO25G00840Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|641966mRNA_8569-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|641966mRNA_8569Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|641966

>mRNA_8569-protein ID=mRNA_8569-protein|Name=jgi.p|Nanoce1779_2|641966|organism=Nannochloropsis oceanica|type=polypeptide|length=584bp
MPQPSLKSFASKGKGKPQREENFFEYMITHHRWVFCVFLLMPLSLAFDIV
LYVRNSVQFYLRNWAPKQHEAKVEEIKKQILEWAKHDGKNKLCTARPGWQ
TMSLRVGKYKKTFRKVKLDLHDILSITTTGQSPSVCVEPLVTMGQLTAAL
LPVGWTVPVLPELDDLTIGGLIAGVGVESSSHIYGLFQHICMEFEVALAD
GSVVFCSPEKNAELFYNLPWSHGTLGFLLSATIRIIPAKQYVKLEYFAFT
NGGKALEMFERESRKGVNRPPLAGTQVAYAAAADLKKRMEGGVTGKGEGD
EGSSPVGGGREDAADYVEALAYSREHVVVMLGTMVDTPEGGKEAGKVNAL
GKFWKPWFFKHVEGFLVKGGKEGERVAVEYVPLRHYYHRHSKSLFWEIQD
IIPFGNNVVFRYLFGWMMPPRISLLKLTQTEALRKLYEEHHVVQDMLVPV
KDLGEGLDVFEEVFGVYPLWLCPMRIPKNPDYAKFGGFVKPLEGGKDEMF
VDVGAYGNPSMEGFNAREACRKAEDWVRAKKGYQMMYADSFMTREEFREM
FDHSKYDELRRRMDLCLQAFPEVYDKVSKAARV*
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Synonyms
Publications