jgi.p|Nanoce1779_2|546437, gene_8568 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|546437
Unique Namegene_8568
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_26:224542..230653 +

Link to JBrowse

Properties
Property NameValue
TranscriptId546523
ProteinId546437
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_26supercontigscaffold_26:224542..230653 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000009alpha-1,6-mannosyltransferase activity
GO:0000026alpha-1,2-mannosyltransferase activity
GO:0000030mannosyltransferase activity
GO:0000033alpha-1,3-mannosyltransferase activity
GO:0001962alpha-1,3-galactosyltransferase activity
GO:0004376glycolipid mannosyltransferase activity
GO:0004576oligosaccharyl transferase activity
GO:0004583dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity
GO:0008375acetylglucosaminyltransferase activity
GO:0008376acetylgalactosaminyltransferase activity
GO:0008378galactosyltransferase activity
GO:0008417fucosyltransferase activity
GO:0008755O antigen polymerase activity
GO:0008921lipopolysaccharide-1,6-galactosyltransferase activity
GO:0016759cellulose synthase activity
GO:00187159-phenanthrol UDP-glucuronosyltransferase activity
GO:00187161-phenanthrol glycosyltransferase activity
GO:00187179-phenanthrol glycosyltransferase activity
GO:00187181,2-dihydroxy-phenanthrene glycosyltransferase activity
GO:0019112phenanthrol glycosyltransferase activity
GO:0019187beta-1,4-mannosyltransferase activity
GO:0031278alpha-1,2-galactosyltransferase activity
GO:0033556dolichyl pyrophosphate Man7GlcNAc2 alpha-1,3-glucosyltransferase activity
GO:0042281dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
GO:0042283dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
GO:0045140inositol phosphoceramide synthase activity
GO:0046527glucosyltransferase activity
GO:0046920alpha-(1->3)-fucosyltransferase activity
GO:0046921alpha-(1->6)-fucosyltransferase activity
GO:0003980UDP-glucose:glycoprotein glucosyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL043ncniL043Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G00830NO25G00830Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|546437mRNA_8568-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|546437mRNA_8568Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|546437

>mRNA_8568-protein ID=mRNA_8568-protein|Name=jgi.p|Nanoce1779_2|546437|organism=Nannochloropsis oceanica|type=polypeptide|length=1660bp
MTLPRPRLSMLQCLRLLALPAFFLLFSLSLTEARSVEFALTADWPTWPLS
SLQEAAEYLANEVEGDESLLWTLVDTLERSPGRDRFDRAALAERFEMDDM
DAVWALTLNETAGLLHPLSQNLLHLYLSLRAYSPALEMHRSLRKGKAFRA
ASGCDEGTSVSWAVISPGMGQREKVICDADKLEETLRTAAAAAAAVVMEE
GGGTKEDTRVLSFDHVYPSSSSSSSAVVVTLYSTLGTSDFYSFHHRLASH
AATGACTYVLRHFIPSSLPSSSSSSLPSSNKTVPTALQGYGMYLDIKNME
YKNIDDSPAPSGGGEGGKEGGQEQQQQQQQAIAIDEEVSGLLFPKLLARE
PSLSTELRTLRSNLLEESSLPSSPSSVTNMKVWRLRDLGLQAAQTVATAK
DPLRKLVDLSQNFPSHASRLSSLKVKEEFRQGALMGTQSHVLGYGHLFIN
GLPKPVTGAIFNVFDILKMLREEVQRLTALSSLPTSPAVQKQLVRLAATA
GAAAAAQDGEEVRLDIYRGSRGALVYLNNLEKDARYRHWPSSLRQLVYPS
WQLQALSRNLYTLTLVVDMADAASLKAVAIMRELYERTFPVRFSVLMVSK
EGKWEEGGEEGVVGEVQEVVKGGKEGGREGAKATSAVVGMLFHHAKEEHG
LAAAVEFLLGTYGDVVRAYSGAVATAKKDRNRAADYVAEGWQALEEGKGG
EGVCGMHRLVKDKGLPVGCFLLNGILSMGLDLDQGIMEMLGQEQQFLAGL
VSQGRLKDSTKSVLGSVLRKGKGVYSRWCPWLEGERRRKAVSVMWLGGSG
GAGAKLAHSGGSVEREKGAKEGGVWEEMQYLHPPGTGGEVKPLTVVMLAD
VGSRKGAESAVMAGGEIEKEEEEGGLGVRCVIVHTPPSSSSPSPLEKDGG
VILDHLLNVVATASSSFPSAVYDIFLETLQADLEEGRGGGGGEAALLLQA
AEGLKEEAREGIARADALQEAAERAILTRKALGVRLTPAGGEDGREEGVV
LVVNGRHIFLGGKALHPLDVEIILSVETQTYTQHLLELFQPPPAAVAAAG
AGAGAIVRRASDLIMMSHSFLNVYVRKSSSSGSSSKGYSDEDDDVLSSLS
ITVLLDPLGEAAQRLSPLLTIFRDLLHLPIRLLLAPSPELTEFPLKSYYR
FSLFPTRDSARVLFQALPPSLVLTTRVDTPESWNVQTKRAVQDLDNIKCE
EIEEGGEGGKKGVVLVLKNLLISGQCFDARMMEPVNGLQLILEVEGGVEK
RHHSDTLVMQNNAYFQLRADPGLWKVKLAEGRARELYEVVSEDEEEGGVL
KLVPGQELVVAKRDFSNSVETLKVQKQAGKEDVPLLDEISQEEEGGWAGG
KDGMWSSLSNLWKGKAVQNGKEGDGKEEEEDETVHVFSLATGHLYERMLK
IMMLSVSKRTSVPVKFWLLENFLSPAFKTAALTMAKHYGFQVEFITYKWP
DWLRQQTEKQRIIWGYKILFLDVLFPLSVKKIIYVDADQVLRADLKELWE
LDLKGRPYGYTPFCTSRNETLGFQFWRSGYWANHLRGRPYHISALYVVDL
VRFRLMGVGDKLRAVYDQLSRDPASLANLDQDLPNYTQHMIPIYSLPQEW
LWCETWCSDESKARAKTIDLCNSPLAKENKLHMARRVISGPLFNESWVEL
DEEVKALVG*
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Synonyms
Publications