jgi.p|Nanoce1779_2|673515, gene_8545 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|673515
Unique Namegene_8545
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_26:164490..167572 -

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Properties
Property NameValue
TranscriptId673601
ProteinId673515
Product nameArmadillo-type fold
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_26supercontigscaffold_26:164490..167572 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL043ncniL043Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G00600NO25G00600Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673515mRNA_8545-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673515mRNA_8545Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|673515

>mRNA_8545-protein ID=mRNA_8545-protein|Name=jgi.p|Nanoce1779_2|673515|organism=Nannochloropsis oceanica|type=polypeptide|length=963bp
MVNAATNEPGEEELVRMLARDVNCMQDPDRMTRRRALNNLSSALVPGGVG
GGQSTVLSPSPAAVCRFVQRNLQGPLLEVIEKDAVEKCRELALKILLAVV
ELMQQQQQQQQQPPLGEEDTGLSTITVAFLPVAKRRIGVAPFLEPTEELR
LAILHVLNVLLSTQAGWIPVLESKAARFPDFSSILVHELADSFPDAKRGA
CLGLGLAARYAPKALRLQQNVLLPPLLGNLGHQQSKVRQASLLALGNLLG
VGNDSMARVVTDSVLPALKKLVFDRTPVLRRELVGVVGGWLQQGEDEGEN
AIPEDINSCIPYNFEGCEADLMFALLLGLSDEVPEVAEATREKVQAAGRA
WVTRKEHQRRINSPSVEAEGSDSEGSSGAQRMVRFLLPSLLPKVLDDVGH
WTLRMRHRSVLLLADVLRLAGPALVPFLSPTVSTLINAALDEEPEVRCAV
AEAARALGEGVEISLPLDELLPLVRGARGAQMAERAAALYLLRSVLEGAV
SAAAGAETSADAEKPAKAAATLGAGGEGPGKEILSSAEMEVLTRSLVDSS
LLNVEEANEASLIALPLAEVLLSIVEAAPEGIKKMNFERRLVRVALQLLA
VPLPESEERGFSVRGLVRRALKILAGREEESVGEGVVVLWERHFDGLLEE
VVVGKEGWRKGSAGRMAFDTLVRECIRGTARQWDKIMAVITPQIVKGNDQ
GGQQQQQQQQQQQEEAELRLAHMLLLESLIDGSLPIAAKEVMEKAGERRM
RQLLRDLLLPTIAWQAGRTAATVRKVGLVCLYRLLREGERGRLPRVALLE
VAPLLLPVLQTNLDDYDATIRHLVALSISALFRAYRLSAVQGQASLLPPQ
AQILQVLPDLMRRLDDASNEVRQASCLALEGLFDIPGAASFFSEEPVLTA
VVDQLLVHLDDAECAEPVWNVLDCMTALGIGVRRMVVERGSKGVHGEKVR
EKLGKPVVKKAS*
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Synonyms
Publications