jgi.p|Nanoce1779_2|602952, gene_8521 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|602952
Unique Namegene_8521
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_26:110109..114369 +

Link to JBrowse

Properties
Property NameValue
TranscriptId603038
ProteinId602952
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_26supercontigscaffold_26:110109..114369 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL043ncniL043Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G00380NO25G00380Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602952mRNA_8521-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602952mRNA_8521Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|602952

>mRNA_8521-protein ID=mRNA_8521-protein|Name=jgi.p|Nanoce1779_2|602952|organism=Nannochloropsis oceanica|type=polypeptide|length=804bp
MKAVKASAFVGRVDVGSGSAKVLETSLQQLLLLLPPFPGAAGAALPAAAS
HLPRSTLAVLLSQGLDASAIPAVRLLTYRVLAQGKALAPHVFAAPDLVER
LVACVLSELGKGTEEEEKYDGNDDGDDDAEEGAEEGCLKKNGDVGVWAIR
ALLSTVTDTHLVVLLRDIVFLAALKHALSPSSPRCQLRETVLLNLGEVLP
RLAAGVDTLSLSQVVAPFQSQADETRFRQEARDGIMDMLKLFFEASESPR
DRTSAAAFYALDAMLEVGAPRALDSEVRTLLGRGSKAPLPTESAQEIALS
LLRQGLGRLPRLLLRASAFSSPCASTLSFLSRLFAYALLETTNGQGLHLH
PPRNKSAVVHLPSAAVYWASHYRQASNEWILTNLLPAALGSSSSQSVSLP
ALRSLLDLLHLPALHHHRQHLAPACLERLLHVAQLLREPSEVEEALALAV
IALKWMPLPLYETMAACLLQAVGSLEESAASAGLVGEVVWLCLLDGQRHG
RMQDGWLLPTILADATLYRTLLEREDDECPQDARCRWVVLTAAFLFLLKL
SPLVLTPPDESEAVGMGEEVAATGRPTALTRVTVASLSPYLFSDIPAEGS
AAAPPIAPSSFWAGNVHRYLSCILALLQRFSILANWPDREGEDAKGEEGP
LSLYISLLSVACRVLLSPSSSSLPFPPADKEEMMVRLKSVLLDLVEFKLP
EGIPAAASRMRLLSVLARHVGGIGSSPEATEQIAWDLVQNLRRELDGSNV
APLAPSQSLSICAGGSVSDVDDQGKKERRKRGVRRKGAGKAQVAVQALQQ
VHS*
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Synonyms
Publications