jgi.p|Nanoce1779_2|632828, gene_8449 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|632828
Unique Namegene_8449
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_24:310655..314247 -

Link to JBrowse

Properties
Property NameValue
TranscriptId632914
ProteinId632828
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_24supercontigscaffold_24:310655..314247 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Cellular Component
TermDefinition
GO:0032040small-subunit processome
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL039ncniL039Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO23G00970NO23G00970Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632828mRNA_8449-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632828mRNA_8449Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|632828

>mRNA_8449-protein ID=mRNA_8449-protein|Name=jgi.p|Nanoce1779_2|632828|organism=Nannochloropsis oceanica|type=polypeptide|length=1053bp
MKVYLRFVPTTTFGVVASPTCTDLLLDPSGKLALTAALENVAVLNLRSGE
PLRTLRPPGPTLEDPETEVAHLGEVTALALSPDGRTVAVGYHAGVINLFE
IKTGILKVTLHGHRSGGVACLVFSRGGTVLASGGRDTDIILWDLVAESGL
YRLKGHKDGVTGLVFIEGGGEEGVPTHVVSVSKDALVKVWELTTEHCVQT
LVGHRSEVWAIEISPDGKRMVTGAADRQLRVWNLEKKKEKEEEGKREGRD
GEVDAEEEVCGYMGSVLRESNDRCLNVKYGGREGGRGEGMLLLAAQDAGK
LVDIYKVRSEDEAKKKMKRRLKRAREKRQQQLLRRYGGREGEEEGNAWGM
PVQQKKLMTGGMDREEVVEDGALVEQLAASDELEWILTVRASHKVRGMVF
ASSSPASSSRPFPSGETARLLLALANNSLEMYTVSVGREGGKEGGSAPVE
YSRLLSLDGLGHRSDVRALALSSDDSMLASTCSHQLKVWSRPQRDAWSSS
HGSGGGGGVRGSTPQCVRTTGLQGAFGLSVCFVPGDRHVVVGGKDGRILL
IDLGTGDILETHRPPRSQADDDDDEEDEDEEGKEDVLYDGHAGAVWSMDV
RPDGKGMATGGADKEVKFWDFDMDVLEEVANGERGGAGGTKSLRLVHTRT
LKLSDDVLAIRYSYSRDPSKLLLAVALLDSTVKVFFDDSLKFFLSLYGHK
LPVLSLDISDDNELIITGSADKTIKIWGLDFGDCHRSLLAHADSVMSLRF
LPGTHCFFSGGKDKVVKYWDADHFELILTHKGHGGEVWSMAMGRDGGFFV
SAGGDRSIRVWERSEDQVYLEEERQRELEGMFEEGAGKDGGDLEVEGEES
GRASKRSLESVKHAERLGEALETAAADEAVGKEHAKLLLAAASNKRVSLP
PPRPPNPLMLGLPPHRFILFHLRLIKGPDLEQALLVLPLDQMQRLLQALL
LLLQENVEVELCWRCVLFLLQTHHHTLLHCRALVPALTQLRGGCKEQLRR
WREGVAMNVEGLRLLKREVEEEKQAFVVPAVDSGGRESVTEEETKKMKKR
KT*
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Synonyms
Publications