jgi.p|Nanoce1779_2|546107, gene_8356 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|546107
Unique Namegene_8356
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_24:21811..24856 -

Link to JBrowse

Properties
Property NameValue
TranscriptId546193
ProteinId546107
Product namePhosphatidic acid phosphatase type 2/haloperoxidase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_24supercontigscaffold_24:21811..24856 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL039ncniL039Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO23G00190NO23G00190Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|546107mRNA_8356-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|546107mRNA_8356Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|546107

>mRNA_8356-protein ID=mRNA_8356-protein|Name=jgi.p|Nanoce1779_2|546107|organism=Nannochloropsis oceanica|type=polypeptide|length=649bp
MRFDLLACLLAIAGLVNVPFARADATMNEWNQLILDQFLEKLTGSPFNTS
RAIAGMHLAQWNTVKEILLQQDLTPDSPNLPISSLLPALQTGVAAAAKTV
LVDGQFVPAGAMAAIEALYDSQVDLTLTAAINIGVTAGQDIIAMRANDGS
TAPNPNSNGDNSTCGVWRSTPSEFAIAAFPQWRSVTPWAMEAPSQFRLPP
PPDFQESSIYQEAYNEVMRLGRKVSAFRTEEETMTARFWMMNVQVYTNEL
VRELTVDYDLVKAARYFVTNAIAFADAAIAGWDTKYEYSFWRPITAIRLG
NCMNDTAKFPMDETWEPLLETPAHPEYMAGHSTTSAACIEALRFLNGGDT
IPAVTITSPMMPMMGGRTFTSLTAIANEITRSRVLGGAHFSFSTAAGQTL
GRQLGANTVKVLGVGGCGAGMYAWGSACLPCQMDTYWPSELFTDSCTPCT
TGFASPMGASACAPRLSIALRANGEEFEGEASEDDGMMMPMSAASASSAS
VSTAAARKGTTFLNRKGRGVIQLVQRNEQSVSSGDLAVVTLTLPRKVKFA
GSGHTISSKTGKVKELRKPKVSGRTLTWEYAPLAAGEENVFTIKVRVHEQ
VSSWLTFQASTYYVTSDNTGCMSDMNGMDGMISMSYGLNARTFNVPVN*
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Synonyms
Publications