jgi.p|Nanoce1779_2|574281, gene_830 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|574281
Unique Namegene_830
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:524542..528701 -

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Properties
Property NameValue
TranscriptId574367
ProteinId574281
Product nameputative spliceosomal protein sap
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:524542..528701 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574281mRNA_830-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574281mRNA_830Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|574281

>mRNA_830-protein ID=mRNA_830-protein|Name=jgi.p|Nanoce1779_2|574281|organism=Nannochloropsis oceanica|type=polypeptide|length=1271bp
MASTGIAPALSLLNLTLQRPGYIHAAVSGNFSSPKAQEVVVIRGTSYLEL
LRTDAERLKVVPVCTFNTFCNLRCLLTFRQVGTNKDYLVVGADTGRITIL
EYVVDSNEFRTVHCETFGKSACRRIVPGQYLAADPLGRAIMISAVEKQKL
VYVMNRDAGGRLTISSPLEAHKSHALVYATVGLDVGTENPIFAAIEKDYS
DADQDPTGEAAAETYKQLVYYELDLGLNHVIRKWSQPIASTALSLLAVPG
ERANGPGGVLILSENWVAYTHQDHPELRTPIPRRAGQPASRGTLLTASAM
HRQKDVLFYLLQSEYGDLYKVTLDLSEDRTKVQNINMQVFDTIPSANGLC
ITKTGLLLCASEFANHMLYQFQGIDNPEAVAADSLEEEALDDEDKLGDSS
EEAAQVAPTFTPAAKLKNLAAVDVLESLAPVTGMHVADLAGEDAAQIYTL
CGRGGRSSLRILRHGLQVSEEASSDLPGTPNAVWTIKGRQEEKHDRFIVV
SFTNATLVFSIGDQIEEVTDSGFLGTAPTLEVKLLADNAMLQVHTHGIRH
IRPGRPVNEWKTPGRKVIEQASANERQVAIALEGGDVVYFELDAAGMLME
VASKEIGLAVACLDLGPVPHGRVGSSFLAVGGYDSTVRVLSLEQVSLLTQ
RSMLQLSVRAESVCLAEMAKDGEGAGGAATASSSSSSSLFLNVGLSNGIM
QRLLLDPLEGTLSDSRQRFLGAKPVKLLRVNIEGSPAVLALSSRTWLSYN
HQGRFLQTPLSYESLDYASDFASEYITEGLVAVTGSSLRIITIQNFGNMF
NQTEVPLRYTPRQMVQVPGCSRLVLIESDHNEYNETERAFLATTEAAAAG
DSHGGAAGGGEGGEEAPEDVAAAAALAAAEGALPPPPPPEGGTEDEEEAE
GETFVRGPLPPVEGKWASCIRIVDGRTGETLELVELSLNEAAVSLATVAF
HDRGGEVFVCVGTATDLCLHPRKHSAAAIHVYRLFDNRLVLLHKTEVEDV
PKSLVELKGFGRLLAGIGHSLRMYDLGKKKLLKKCENRNLPNFIVGMQTM
SDRIYVSDVLDSVHFVKYRRAENALVVFADDTAPRAVTACCTVDYDTIAG
GDKFGNLFLLRLPEKVSDDVDNPTGNRVLWDTGRLNGAPNKVEVLAHFYV
GEVVTALQKVALVPGGQEVILYTTVAGTVGALVPFSSRRSKNTFFLLEME
MRKEANLHFKRDHVAYRSYYAPVKEVIDGDLCELFGGLPVAKQRAVALEV
LDRTPGEVLKLVEDFKNTIL*
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Synonyms
Publications