jgi.p|Nanoce1779_2|601454, gene_8292 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|601454
Unique Namegene_8292
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_23:281823..284062 +

Link to JBrowse

Properties
Property NameValue
TranscriptId601540
ProteinId601454
Product nameputative, dynein intermediate chain
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_23supercontigscaffold_23:281823..284062 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL038ncniL038Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO29G01150NO29G01150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|601454mRNA_8292-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|601454mRNA_8292Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|601454

>mRNA_8292-protein ID=mRNA_8292-protein|Name=jgi.p|Nanoce1779_2|601454|organism=Nannochloropsis oceanica|type=polypeptide|length=708bp
MGRTTVLKKSATKKPSTAATTSINAAASLLASPAEVAKNMPSTASGTGSN
STKAPADPEKVPITYLQLSEAELREDVNRVLTAMDPQLPSNLVTYSYKER
AYKPDPPLQQADLLTIHFAVEGNTLHKDSVEAKQQAQWEGKRKDDMERDR
QLALEEAVQAGEEAFFVEDEEKKGMRGGFKYCDRAAQTFNRPTKDKAVGS
EPPPVLTFTANCNQWEIYDAYLAQHREQQQQQQDSGSKSSRSGPGGEGTQ
TVHSEKLGKSLEVLERMLTQNAEDEVFHNFKYWDDTADLSRAQGSLLQLW
QFVTERTKRKQVTALAWNPRYHDLFAVGYGSYDFLRQDTGLIFCFTLKNT
TTPQYSFSTEAGVMCLDFHPEHPYLLAVGCYDGNVLVFDMRLKANCPIYA
STVTTGKHTDPVWKVRWQTLEEGLLAGTCISLADRELCFYSVASDGHVIS
WLLSKNELRMEPVMQLKLMAGKGVSSLISSSAPTGQSNSGVSSDLSGLDD
ETPNLLTSLTGLASGSCFDFCPLPGQGHLFLDSTLATYEGGHMMAVYAVR
WNPFHPKLFLSCSADWTVKLWDQTRPGAPLLSFDLGNAVCGVDWSPVSST
TFAAVTSDGRAHVFDLTADKHEPLCVQKVVRRAKLTHVAFNAHEPILLVG
DDRGEVTSLKLSPNLRNWHEPKDDVGNVLPHDAVRLQYNNAEKLLATVVG
MNKGTGK*
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Synonyms
Publications