jgi.p|Nanoce1779_2|601115, gene_8208 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|601115
Unique Namegene_8208
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_23:50834..51494 +

Link to JBrowse

Properties
Property NameValue
TranscriptId601201
ProteinId601115
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_23supercontigscaffold_23:50834..51494 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0000151ubiquitin ligase complex
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL038ncniL038Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|601115mRNA_8208-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|601115mRNA_8208Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|601115

>mRNA_8208-protein ID=mRNA_8208-protein|Name=jgi.p|Nanoce1779_2|601115|organism=Nannochloropsis oceanica|type=polypeptide|length=186bp
MEAASAENAAASIHLAAVDLSGRDDGEVEGEGLYGELASPPAGSERRKEE
GGDVEEEKEDEEEEEDMPFDKEDGAPEDLICPLSLCLFEDVVMAMDGISY
SRQSIQSHIDFCKAKGRPVTSPMTGEKMETLLVPNVMARRMVLEYIQEKK
NEWTRRKRGEGVGRQESTTGGKIIEAEKVKKGLYS*
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Synonyms
Publications