jgi.p|Nanoce1779_2|632951, gene_8191 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|632951
Unique Namegene_8191
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_25:385893..388457 +

Link to JBrowse

Properties
Property NameValue
TranscriptId633037
ProteinId632951
Product namePre-ATP-grasp domain-containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_25supercontigscaffold_25:385893..388457 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0009374biotin binding
GO:0016874ligase activity
GO:0003824catalytic activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL040ncniL040Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G02220NO21G02220Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632951mRNA_8191-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632951mRNA_8191Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|632951

>mRNA_8191-protein ID=mRNA_8191-protein|Name=jgi.p|Nanoce1779_2|632951|organism=Nannochloropsis oceanica|type=polypeptide|length=380bp
MSSSSTSGPLSPRADFSTVEEYVEHVGGTRPIKKVLIANNGIAAVKAIRS
IRRWAFETFQDERAISFVVMATPDDMRANAEYIRMADEVVDVPGGSNNNN
YANVMLIVEIAERWQVDAVWAGWGHASENPRLPDSLAKTDRRVVFVGPPG
APMRALGDKIGSTIIAQSAGVPVIAWNGNGIVCDYAAGGLSDEVYARANV
LSAEAALKAAAEIGYPVMVKASEGGGGKGIRKVEDADTMPSLFRQVQGEV
PGLAHLCDEIGACLPSSRSAAPGRCPWTGRWCLIPSFPPSLPITPFFPTH
QSLLPSFLPSASLLSFLQPSPPLLPFFPPHHPLLPSPSLPITPSYASSIP
LSCLLGPYMPPSHNNFSLNLALPPSLPPSL
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Synonyms
Publications