jgi.p|Nanoce1779_2|601005, gene_8026 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|601005
Unique Namegene_8026
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_22:489036..497972 -

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Properties
Property NameValue
TranscriptId601091
ProteinId601005
Product nameABC1 family-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_22supercontigscaffold_22:489036..497972 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008800beta-lactamase activity
Vocabulary: Biological Process
TermDefinition
GO:0030655beta-lactam antibiotic catabolic process
GO:0046677response to antibiotic
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL037ncniL037Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G01830NO26G01830Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|601005mRNA_8026-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|601005mRNA_8026Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|601005

>mRNA_8026-protein ID=mRNA_8026-protein|Name=jgi.p|Nanoce1779_2|601005|organism=Nannochloropsis oceanica|type=polypeptide|length=807bp
MAKWRKLDDKEAKALYAKADVWLAPWVCRRFVSLRSVFVKFGQYIGGRTD
MVPPDWASSLSLLHDQLPPCPPSYVRQAITVQFKKSFSTLFSSFDFSPLA
SASVAQVHRATLRGSGQEVVVKVQHQGIEALMNNDMKAAVRVFRLVAFLN
RDFELLLYILKSWAEEIEKELDFRVEASNLERVRENLVVRGGLDVILPQP
VEGLVGKRAFAMDYIEGFKITDTAKLALHRVDREALMARVCQAYNHQFFV
DGFFNADPHAGNLMVSIQDGICRPVLLDFGMTVQVTTARRKGYCRLVFQA
SSLDVLGAGHALKAVGYTNSQSASHPERDVEFFQFLMRDTGTRASQREDA
DEYFKKRKEQKLVDKAEGVDPNRYMKEVPPEMFFLFRMLGLIRGLCTTLE
VKLPYLEIMADYAQKGLVLGYDRKLRATRLLSLPARPPLPLEVKLQRLLL
SLCGSRKLLGVQVVLVRRGQMILNLAGGVRGATDPRPVDESTLFPILDLG
NVLTALLLQVYMREGVARRGYETSLATLLPPALARVVPEAVRLKHLFSHS
TGLPVGLPSSLLPSTLLNHEACLKLLAASFASAPPLHPPGTKASQSLLDF
GHLAAALLQETCNIPPPSLPQAFYDKVLRPLDLTGEVFLGGFKQGVNGNA
RSLAVVHNGFAAQLRPLMAMVGGGGGGAGGAINEGAEEGREEGKEGDKED
TSRPSSASMMERVLRHPTMVNEPTTQAGVCPSLNALATARGLVFVMEALN
GGTKLLSRRQQGLLRLVLARESCPLYGERQWGLGMQIGGDGVSEKRVRAG
RREGGN*
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Synonyms
Publications