jgi.p|Nanoce1779_2|181837, gene_8006 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|181837
Unique Namegene_8006
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_22:407907..412073 +

Link to JBrowse

Properties
Property NameValue
TranscriptId181923
ProteinId181837
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_22supercontigscaffold_22:407907..412073 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0008270zinc ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL037ncniL037Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|181837mRNA_8006-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|181837mRNA_8006Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|181837

>mRNA_8006-protein ID=mRNA_8006-protein|Name=jgi.p|Nanoce1779_2|181837|organism=Nannochloropsis oceanica|type=polypeptide|length=434bp
MELSVSGGRGLSGVGSQPPRPINLPTLWSHPWQKQSRAPKLLHTCVRCRV
GKMKCDGTYPCHRCWRLSLPCRIQKGKGTEHLSTVDMVIERTDPTALTEL
YLRAFRQVQSEGKIERQKAVCMLRTWHSLSLLVGRDITWGIAHQVAHILA
ITAFEVEGGGSSSSSSLPDYTRNQRAKEEADGMLHSVSELKETPTFQSLD
QGALGVGKVGFLLTSMDGSRLIQASNGLYDKIFRGVEESHRDVMRRQTMQ
ELLMASFIAPEDRLLLFLYLVKAFFTNLNTTCTYVFKCFDKQGDISLFLF
THRPLSLPPSLRPAFALLVEPAPPSRYLSGRSRPSYQGMHTHRLVYKHLK
GEQVVANITTIAGEEGEAAAQNTSSLPSSSSSSSAISTTSTSTTTTTSSS
SSSSSSTLPPLDLHHSSMNPKEGSGGWGGWEDR*
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Synonyms
Publications