jgi.p|Nanoce1779_2|545923, gene_7989 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|545923
Unique Namegene_7989
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_22:345266..348024 -

Link to JBrowse

Properties
Property NameValue
TranscriptId546009
ProteinId545923
Product nameFGGY carbohydrate kinase domain-containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_22supercontigscaffold_22:345266..348024 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0019150D-ribulokinase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL037ncniL037Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G01510NO26G01510Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|545923mRNA_7989-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|545923mRNA_7989Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|545923

>mRNA_7989-protein ID=mRNA_7989-protein|Name=jgi.p|Nanoce1779_2|545923|organism=Nannochloropsis oceanica|type=polypeptide|length=631bp
MPSSETDSSASPLYLGIDVGTGSARAAIFTVEGAQVGEAIACPIRLYKPE
GFPLLYQQSSEDIWRAVCRAVRGALACGALATSTEKNAGRNTVRVVALAI
DATCSLVVLGADDRPVSVTPEDTTAMEEEGGEEDIPNVILWLDHRATAEA
AEINAKGKAGREGIGGEDGKAVANRLRFVGDNLSPENEVPKLLWLKRHLK
KRCQARFWDLGDYLSYRATKGEAGRGGGVAGGRHGAEEVRSLDQKFLSSI
GLGDLGPAQLGSLIRRPGEVWGKLDRNAAVDLGLAGDRSEGQSSSSSSSS
SSTPILVGVGAVDAFAGAIGSLGGPLGETPAVSRLALISGTSTCHLSCSP
SPVFCPNVWGPFYDVLGTGAWVSEGGISASGKLIDLLLESHPAYLEAQRK
ARLHEEFGPWQHGHGTGYVQQYLNKHLASMAGARGLPSLALLTVHLHVGP
DFAGNRSPIGDPALTGSLIGLGLDAASLDALALLYLATLQALALGTQHIL
EALHAAGHPGGISHLCVSGGLGLKNDLFCQVHADVTHCTLVLPPAGTEGV
LLGSAMLAATAAGRYATVQEAMRGMSRGTGERRLVCPCEDPRVQAFYAGK
RDVFHAMREDQVRYRARMKEAMGEGGGTEV*
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Synonyms
Publications