jgi.p|Nanoce1779_2|180665, gene_7984 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|180665
Unique Namegene_7984
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_22:330066..333630 +

Link to JBrowse

Properties
Property NameValue
TranscriptId180751
ProteinId180665
Product nameAcyl transferase/acyl hydrolase/lysophospholipase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_22supercontigscaffold_22:330066..333630 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0006629lipid metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL037ncniL037Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G01470NO26G01470Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|180665mRNA_7984-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|180665mRNA_7984Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|180665

>mRNA_7984-protein ID=mRNA_7984-protein|Name=jgi.p|Nanoce1779_2|180665|organism=Nannochloropsis oceanica|type=polypeptide|length=623bp
MTAPLQAPPQQRRRRTTGLRQILAGLCLGSVTIRGDAAAATPLRAAAAAS
AGGASAAAGSLPVYRTAAFIPHYNGGQNKGFWGEVRRGRQHPQEQQQQQQ
RQGQGRADRATVETISSSSSYSSFPSFSFFSFRSSLFGGVTPLASTRRRS
SEEEEEDVDIESRSRKEAVRVTSSEQLQYLLSPEGGLRLRDLDVRGDSTA
TLLSSSSPSFSPLPHPVAVAIHGRIASKSQPGARADGMKIGLSLEGGGMR
GCVGAGMLAAINHLGLRDAFDVVYGSSAGSLMGAFFLSGQTPLEGPGIYY
DILSQAGKDFIDQRQIMRSIGLGALDFRRETYGAMLKRQPGKPVLNLDFL
LQTVIERLMPLDWNTFWARNQLIPLKVVASALLSKQSVPLSSADGNFQTL
QELAQCMRASMLLPGIAGPLVRIGEDRTGSSLERTFWPEPVRRGGQRDLT
KGSEPLCDAMLFEPIPYRSALKENCTHVLVLRTRPDGVSVTGKMGLVEKL
MYRRFFSRKNDLPGVAEWMVNQQHKRIYAEDVLRLNQEARVPSSTGPSPL
MTIALREDMPEIHRLEMRRPVLLEGVRNGFAVAYDMLVQDAGMRGKGAEV
ARQVFLVAEGTDGGGGEASRGE*
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Synonyms
Publications