jgi.p|Nanoce1779_2|180045, gene_7978 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|180045
Unique Namegene_7978
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_22:306734..317457 -

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Properties
Property NameValue
TranscriptId180131
ProteinId180045
Product nameGolgi-body localisation protein domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_22supercontigscaffold_22:306734..317457 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL037ncniL037Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G01430NO26G01430Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|180045mRNA_7978-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|180045mRNA_7978Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|180045

>mRNA_7978-protein ID=mRNA_7978-protein|Name=jgi.p|Nanoce1779_2|180045|organism=Nannochloropsis oceanica|type=polypeptide|length=1674bp
MLPPFLLGFLLILLLGMGAIAVIFVRLVTKILPRWLTAHLPGLSFILNPA
CELYIARFEWQDGRLSWQDGKLCLRIRRFKALLVVRQRGGGREGKGIGAG
GGAMASTTITTTTSDNISMNQKEGDYSLQARSLNLRNGMSWFVQIGSRHH
PLWQLASPMLKFGQPFLGLASYVRVEVEEGTAEVVLEGGMAEVVLEQQQK
EGEEKEWMEEGGREGWSSVVVKLQRLVFQPSAWTTPQTDPTRATSSAAAT
AAAAPSGIALEVSLGIPSSSSSSSSSSSSFPPPLLSLKQSVVRAGGARAG
KGGEKNGVILIPLLEVRDRLSINVDLPWPPQLAHRQGENEDGKKEGKLRG
AKEGGSFDYLARPPLLPRTVRLRLGAGVRVTPAPPGGLSAPFWRVLRGML
APSDSRKEEGREEGESPAFGGGRKREQETPGSMSLTGTSMTPLLRQYLAT
FESHHPHHHQEQPPHPPQPQQPEQQQREVHTPLSLPDLLLASEWTQFMIE
CPSLHLVLALPEKARGWAAVLCLDGFVATTSKTAVEKDRLSTLYRLGLKQ
ASLALRRRGEGVGKEEGRRPPLVLVGPAEAEVGVSVVYDDVVLPAPSSLP
FPPPSSSSFKFLPRLAPQLRLSWDVCGLLQLHALQVHCEDALLPFLSPCF
LSGGKANRKKEEREQGRERARSRVRVAVTVKCPRMEGLYRGEEEEEEGRQ
GGREGGGYAYTLTGKVDGVVLETQPSDYHSLDGEGASSSSSSRSSGSSTL
MLRMRGMNIKMAMEKRGGTGGSTPAAASADECVSHFLTLCDLRVRAGPGP
QMVGDWRREGKKEGGLVIPSPEERVVMCEAGEINLEWSPVVVVGLACILQ
PFLLPAPSPALPYLNPPPPSLPPSPLPPLSPPQAIRLLAGELEGQPALLQ
GRVSSLAIRFPSSLAPSSSLGDMSSPEVWKWAREGGSEGGAEVVVAEEVM
IKVGPSVPSAVRPGGKGQEAGEEGGERDWIFRVSNCRGRRKGGIVFREWM
EAWILDLDEEVQARKEAAERAADAYLAIHHSLEPQALLKRSTHLDIRVRA
CHLTLLLPQQQQQQQQQQQQQPFLRVALGPGRGTWGVAKDGGKRLTIDLA
GLKVEDIRTRGVGREGGKEGGDVGSPGGGGRGTLVLFAAAQKGREGGGGG
GEAAPTSPLPGSECGLGYFGGGEGEKAEREGGLVLQVQADVGVPVGRLTI
LRHLEINCCPLTVRLTRGLAVQIYEFYASVSGELHDENRGRDGEKGELLL
LSKQQQHRQAAGKIPPPKTNKVAHPPLPSSSSSSSSSSSSSSFSSSSSTT
TISSSSFTPSSSYTTMATTPNRRTTYSIFSSSTNASVPRPSQPTAPLSSP
SSSTALLTKKQQQQQQEAGAALEERAARNIVFKHFRLGEINIFFSYSGAK
WGNLEDVEHLHLKLHALVYTNKTLSAQEFLKKVRKNVILDLFKQVNRNFK
NLGAWIRGSMFVSGWQAFEEGEEEEEDDEEDEKEDEKDEYCEEDCVHGLK
KEGRREERRPVSVGRGLMGLLPSVPIVLSPSLPSSPSSFASSVFPSSSSS
RQSSSTAPFSGERKEGRLPQSSNPPLSGSSRSISNIPRPFSPPVDVSVAG
SGITDRERPVMLLFGGIEAGNQKEKASGKERGKQSPAVEDRKTLFGDVGR
EGREGGVKGGGGFLGRFMSGGKP*
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Synonyms
Publications