jgi.p|Nanoce1779_2|545810, gene_7912 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|545810
Unique Namegene_7912
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_22:151443..157323 -

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Properties
Property NameValue
TranscriptId545896
ProteinId545810
Product nameDNA polymerase family B-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_22supercontigscaffold_22:151443..157323 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0034061DNA polymerase activity
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0003677DNA binding
GO:0003887DNA-directed DNA polymerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0006260DNA replication
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL037ncniL037Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G00900NO26G00900Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|545810mRNA_7912-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|545810mRNA_7912Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|545810

>mRNA_7912-protein ID=mRNA_7912-protein|Name=jgi.p|Nanoce1779_2|545810|organism=Nannochloropsis oceanica|type=polypeptide|length=1143bp
MSGRGGGSRVGNGGRGWGGDQKRNGGGRGGGGPPKRPRNNNNAGDDPDDN
SPDDFGEDFHDLEDQIAAELAAEMPPEEYEQLTAASTETINEATMQRWRR
PPVPPIDIHNDSMTLQWLDVDMTVGKRLERNPAGGRVPGASAGLVPILRF
YGVNPVGNSVIVFVHGFTPYLYASCPASFVGSEAPFRKALNDRLLADKQR
GGSRGGGGGGGTEMSDLCLGTTIETDKRSILGYAANGNQAFFKIYVATPN
LVPTVKRVLEDGMDVPGFGRLQGCLTYESNVPFVLRFMIDKSITGAGWLE
CPKGTYAVRGEREKESHCQIEVDIVYDRLIGHNPEGQWNKLAPLRILSTD
IECQGRKGHFPEAEKDPVIQIANVVTVQGTSEPVLQNVFTLRGCLPIVGA
QVLTHDTEEDLLVGWRAFIQEADPDIVTGYNIANFDLPYLLRRADTLVKR
APKLKVFKELGKLKRTMATMKDTTFQSSAYGKRENVETTIHGRVIFDLLP
YMFRNHKLSSYSLNSVSAEFLGQQKEDVHHSIISDLQNGTDEDRRRLAVY
CIKDALLPWKLMEKLSVLVNYIEMARVTGVPMSFLLTRGQQIKVFSMLLR
KCRESSLLIPNLAKNRQDEGTYEGATVIEPKKAFYQEPIATLDFASLYPS
IMQAYNLCYSTLLSREEKMALPPDSYITTPSQESFVKPSVRKGILPLILD
ELLAARKRAKKDMAAATDPMEKAVQNGRQLALKISANSVYGFTGATVGQL
PCIPIASSVTSYGRDLLYQTKAFVEENYTIEKGFSTNAEVVYGDTDSVMV
KFGVPTVEEAMPMAERAADEVTKIFPLPIKLEFEKVYFPYLLMNKKRYAG
LLWTKPEKYDKMDTKGLETVRRDNCLLVRRVIDTCLRKILIDRDVQGAIG
YCKNVISELLQNKMDISLLVITKALGKSADESGYAAKQAHVELAMRMKKR
DAGTAPNVGDRVAYVIIQAGKGAPAYERSEDPVYVLENNIPIDTDYYLQN
QLSNPLTRLFEPIIDNPESLLSGDHTRSIARPTPTAKAGGIMMFAVKKLK
CLGCKTPIPETEKSTLCLHCRPREAEIYTQKALEVAAHEGVFSKLWTQCQ
RCQGSFHQDILCSNRDCPIFYKRKKVQKDLADAQDALDRFSF*
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Synonyms
Publications