jgi.p|Nanoce1779_2|673074, gene_7887 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|673074
Unique Namegene_7887
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_22:85739..91868 +

Link to JBrowse

Properties
Property NameValue
TranscriptId673160
ProteinId673074
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_22supercontigscaffold_22:85739..91868 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL037ncniL037Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G00660NO26G00660Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673074mRNA_7887-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673074mRNA_7887Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|673074

>mRNA_7887-protein ID=mRNA_7887-protein|Name=jgi.p|Nanoce1779_2|673074|organism=Nannochloropsis oceanica|type=polypeptide|length=1557bp
MSPTLPVDPQQQQQQQQQQQEEEGGKGGEQEIQDGYRDGSSDAYGVSSHF
SGGMEGEEGERERGNGEGASASSSQRAYEEEQHRQQQQQQQQQQQQEEEK
RLRREQEQQQQQQQQEAEVSSTLFGDGEGGGGREGGREGGRQDNEVPIVR
ELSEPRHDLFSGAASAFEVEGKGGRVGEMETQAFFGGGGAEEEQGHYNEH
GEWVWSAAAIATYEEQQRQLHRQQQPQPQGEEGGEGGREGGQYLVGQTYE
WRDESGQVHYYVHQGEGGGQEGGGDGAYDQQQQQGYYDEGGMWVTHQQGG
EGGGEEQQQKQPHQGYCDENQDRVSYQGGAGQEGGVEGEGGGEQQQQQQH
HREPEAEAPYSPFLTMGGGGGGREGGQEEYTVFTPAAIPPFGLEGRGGGG
GGGGVPTSRPQPPPVAQQQQQQQQQQQHQQPTKHVVSLASRTAAAAAGGG
GGGGEGTSGLKQGPVQMRKLAERSEGGKEEGKEGGLFVKEAAGGNASCEW
TGEKAHAFAQFRMQAWATRKGRKEGRKGTEWLLWKVVEIACRHRGHLRSL
AGAADARSPEKEVIQALYHDEGEREEGGEGKAGIIVPESSTSTMGAWATS
TSTFPTLPPSLPPPQRAAVMHSLESRLIAGDTVGAVHLAVSHALYFEALL
LASNIPFHAVGGREGREGGRELPLAQQVVLAYCQAALPPGLPFHTLCLHL
SDLAILPPGSSLSSTSSAAAAAAGGGGGGGGGGGGVRPGPQNPFVLGKQL
MQKQHHQQQQQQSPRQQQQEQQQQPPQPSSSSLPPAAPSSSPLLQNWRRN
LALLLSVPPSLPSPSSSSSSAASFPPSSASPIPSSSTAASFTPSLASHPA
ILQMGDALMMEGQVPEAHLCYLLGGLLPGGGGGEGGREGGAVERESFVLI
GVDGRREGGRGVGTEEGVEAFYRAEIMEFLRQHYGHYTKRSSSSSSSGGS
SARSTPLQQGGVGGLPLSLPPSRPTLLLQPYRLQFAKVLMEEGHLWHACS
YSSSLKALLHPFLPPDPTVEKMMHLALPPSLPPSFALDVFTFHARMEDLA
GREGAPPRPTAAAAKKSSVEAGKNIVSGLMRNLGVLVQETIHKTVFEDEG
GMGNGGAGIGRARGEEGGGGVGEGGGGRGEGGKEGRTKTEMLYPPFVFQG
PFKGKGGREGGTDGPVPAAAWPAPGGLRRYSSAPASPHKMQHQQQHQQHQ
HQHQHQPQPPLGLPPAIPVIASSSSLSSSHSSSLASSLPPSPVPPPSGMY
NALANAPRKSSSLAPSPPSSTPASSISLSQSGASYASALEDVSHSQQAPP
PSLPPSGSGGTAAFMTPPLYQKPEQQRQQQQEDRDTSSPATTAPSPAAPP
SLPPSKPLSSVSTKSTSKGDGGGGGSGTSTPTQGGGGGGGMVGRIAGLFG
IKKPVTADLGEKMEAYFDKERNRWVFPGQGEGGNEDEDAALGPPPTGPPS
GAPQPSEEGGKEGEMDMLSMMMAPPPMRSLPVRRATVSGPVAGSAGVGMG
GGIGGGRGAGASPSGPRLFVPRKMTPQEIQQQQQQQQQQQQQQQPPAEDG
VGGGPS*
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Synonyms
Publications