jgi.p|Nanoce1779_2|141994, gene_788 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|141994
Unique Namegene_788
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:434909..438607 +

Link to JBrowse

Properties
Property NameValue
TranscriptId142080
ProteinId141994
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:434909..438607 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G02030NO02G02030Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|141994mRNA_788-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|141994mRNA_788Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|141994

>mRNA_788-protein ID=mRNA_788-protein|Name=jgi.p|Nanoce1779_2|141994|organism=Nannochloropsis oceanica|type=polypeptide|length=1104bp
MLHATYKNLAAYAPVTAGNVTVVAASGVKDEPKTICVLSVADTGLKDEFV
EVHSSSSSSSSSSSSSLSRLALGGRHLAVGFEGNQKMLRLYDTTTPSKKE
AVDLKYPAEVQQLCLNQQYAAALLATLPPQVVLHALEEEAPFRRKNKLSV
VIGLNCTGLEQWFGIDNRCQGAVLTCIALTDQFLFLGDDHGKIHVFSLSA
WNHFSSGDTHSLKSPIQSLHPNALGTRVLVIDGGRAGHVYDPTAHDAKHM
FLPLPDFPTEQRVTKVLWDLVDRHAVHIVGGNNHLHTYVYAASSMAGPSV
ANVGPLDISEDGDITMSPCAYDFVTAEHGMPVLANGGRLLCVGRKKPRCV
LAPSYPDDGTGDEVESVTGMTERFKKCLALLHFGDAGTFARRLNNRACWL
ALSSKAIELLDLPTAIWVYRTLGDAGMVLGLEKIQHVENQHLLAGHIAVL
FGRYTQAEKLFLASTYPAAAVDMRRNLLQFQQALKLARVVAPQDVTHVAV
QYGQQLELQDGDYDGALRVYGMVEGQLLSAVGNLSPQHHSFLLATCRGGS
ARCMLRIGHVRKGMALALALLECGDMYNHNGTQESISNLLQLALVECARI
LESTKATWLEAATLYKRAGKDEHAAKIYIEAKALEQAAPLLDRVALPKLH
NLFAKACEKEGNYASAITAYEKAHDQDSVIRLCLREDPPKAYELIRETAS
ATAALLAAKYCREVGDMVHCLEFLLLAQQNEEAFEIAKAGQVVETYAQLL
LTQGCDVQHILDYYKQSRAWTDAGRLYHRLDKPANAIPLLLQGGAVEEAI
QIVTTVEDASKKEAKDIMVAFLSDGPGKDWRYLAQLFSALGDGPQVVRVA
LSRADQEQRTENYVEARSIVHAAIHDLQSLGVPLSLLGPVQTRFMVLHSY
CLVKVLLRHDHHESAARLLLRVVKHVKCFPGQRVRLLTSVVLQCQRVGLT
AAAYQHALTLIADPQYRQGMDSKIRRKVENIVRRHGAEQEDGGSTGLDDE
AMSPCPFCNTFLPLTELQCPGLHATSIPMCIVSGRHMEREDWCLCPNSRL
PALYSAYLDYIEIEGKEAKEVVDPVCGRPVTAMQLIRVAPAGVDAALARY
KAN*
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Synonyms
Publications